RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
VPS26A-209ENST00000497564 IQGAP1P46940 1657 aa20.49■□□□□ 0.87
VPS26A-209ENST00000497564 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
VPS26A-209ENST00000497564 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
VPS26A-209ENST00000497564 ADGRB3O60242 1522 aa20.48■□□□□ 0.87
VPS26A-209ENST00000497564 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
VPS26A-209ENST00000497564 STAG3Q9UJ98 1225 aa20.48■□□□□ 0.87
VPS26A-209ENST00000497564 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
VPS26A-209ENST00000497564 SLC52A1Q9NWF4 448 aa20.47■□□□□ 0.87
VPS26A-209ENST00000497564 KDM5AP29375 1690 aaKnown RBP20.46■□□□□ 0.87
VPS26A-209ENST00000497564 MYO5BQ9ULV0 1848 aa20.45■□□□□ 0.86
VPS26A-209ENST00000497564 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
VPS26A-209ENST00000497564 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
VPS26A-209ENST00000497564 STRCP1A6NGW2 1772 aa20.41■□□□□ 0.86
VPS26A-209ENST00000497564 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
VPS26A-209ENST00000497564 EID1Q9Y6B2 187 aa20.4■□□□□ 0.86
VPS26A-209ENST00000497564 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
VPS26A-209ENST00000497564 SPATA31E1Q6ZUB1 1445 aa20.39■□□□□ 0.85
VPS26A-209ENST00000497564 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
VPS26A-209ENST00000497564 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
VPS26A-209ENST00000497564 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
VPS26A-209ENST00000497564 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
VPS26A-209ENST00000497564 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
VPS26A-209ENST00000497564 CPS1P31327 1500 aa20.35■□□□□ 0.85
VPS26A-209ENST00000497564 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
VPS26A-209ENST00000497564 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
VPS26A-209ENST00000497564 PPLO60437 1756 aa20.31■□□□□ 0.84
VPS26A-209ENST00000497564 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
VPS26A-209ENST00000497564 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
VPS26A-209ENST00000497564 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
VPS26A-209ENST00000497564 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
VPS26A-209ENST00000497564 BCANQ96GW7 911 aa20.27■□□□□ 0.84
VPS26A-209ENST00000497564 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
VPS26A-209ENST00000497564 STAC3Q96MF2 364 aa20.25■□□□□ 0.83
VPS26A-209ENST00000497564 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
VPS26A-209ENST00000497564 MYOM2P54296 1465 aa20.24■□□□□ 0.83
VPS26A-209ENST00000497564 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
VPS26A-209ENST00000497564 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
VPS26A-209ENST00000497564 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
VPS26A-209ENST00000497564 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
VPS26A-209ENST00000497564 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
VPS26A-209ENST00000497564 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
VPS26A-209ENST00000497564 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
VPS26A-209ENST00000497564 LAMC1P11047 1609 aa20.22■□□□□ 0.83
VPS26A-209ENST00000497564 KCNA6P17658 529 aa20.21■□□□□ 0.83
VPS26A-209ENST00000497564 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
VPS26A-209ENST00000497564 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
VPS26A-209ENST00000497564 DCAF11Q8TEB1 546 aa20.21■□□□□ 0.83
VPS26A-209ENST00000497564 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
VPS26A-209ENST00000497564 NEXMIFQ5QGS0 1516 aa20.2■□□□□ 0.82
VPS26A-209ENST00000497564 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
VPS26A-209ENST00000497564 PIP4K2BP78356 416 aa20.19■□□□□ 0.82
VPS26A-209ENST00000497564 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
VPS26A-209ENST00000497564 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
VPS26A-209ENST00000497564 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
VPS26A-209ENST00000497564 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
VPS26A-209ENST00000497564 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
VPS26A-209ENST00000497564 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
VPS26A-209ENST00000497564 SCAF1Q9H7N4 1312 aaKnown RBP20.16■□□□□ 0.82
VPS26A-209ENST00000497564 TOM1O60784 492 aa20.15■□□□□ 0.82
VPS26A-209ENST00000497564 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
VPS26A-209ENST00000497564 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
VPS26A-209ENST00000497564 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.81
VPS26A-209ENST00000497564 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
VPS26A-209ENST00000497564 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
VPS26A-209ENST00000497564 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
VPS26A-209ENST00000497564 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
VPS26A-209ENST00000497564 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
VPS26A-209ENST00000497564 METP08581 1390 aa20.09■□□□□ 0.81
VPS26A-209ENST00000497564 HSPA1LP34931 641 aa20.09■□□□□ 0.81
VPS26A-209ENST00000497564 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
VPS26A-209ENST00000497564 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
VPS26A-209ENST00000497564 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
VPS26A-209ENST00000497564 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
VPS26A-209ENST00000497564 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
VPS26A-209ENST00000497564 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
VPS26A-209ENST00000497564 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
VPS26A-209ENST00000497564 EIF4G2P78344 907 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPS26A-209ENST00000497564 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
VPS26A-209ENST00000497564 MSH6P52701 1360 aa20.01■□□□□ 0.79
VPS26A-209ENST00000497564 USP47Q96K76 1375 aa20.01■□□□□ 0.79
VPS26A-209ENST00000497564 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
VPS26A-209ENST00000497564 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
VPS26A-209ENST00000497564 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
VPS26A-209ENST00000497564 NBPF1Q3BBV0 1214 aa19.98■□□□□ 0.79
VPS26A-209ENST00000497564 C14orf37Q86TY3 774 aa19.98■□□□□ 0.79
VPS26A-209ENST00000497564 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
VPS26A-209ENST00000497564 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
VPS26A-209ENST00000497564 NCOA3Q9Y6Q9 1424 aa19.96■□□□□ 0.79
VPS26A-209ENST00000497564 ROBO1Q9Y6N7 1651 aa19.96■□□□□ 0.79
VPS26A-209ENST00000497564 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
VPS26A-209ENST00000497564 SLAIN2Q9P270 581 aa19.94■□□□□ 0.78
VPS26A-209ENST00000497564 ROBO2Q9HCK4 1378 aa19.94■□□□□ 0.78
VPS26A-209ENST00000497564 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
VPS26A-209ENST00000497564 ASXL1Q8IXJ9 1541 aa19.93■□□□□ 0.78
VPS26A-209ENST00000497564 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
VPS26A-209ENST00000497564 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
VPS26A-209ENST00000497564 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
VPS26A-209ENST00000497564 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
VPS26A-209ENST00000497564 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms