RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PLEKHG1Q9ULL1 1385 aa25.88■■□□□ 1.73
TRAPPC3-207ENST00000497251 BCANQ96GW7 911 aa25.88■■□□□ 1.73
TRAPPC3-207ENST00000497251 XIRP1Q702N8 1843 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-207ENST00000497251 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
TRAPPC3-207ENST00000497251 PPP1R15AO75807 674 aaPredicted RBP25.85■■□□□ 1.73
TRAPPC3-207ENST00000497251 TBX22Q9Y458 520 aa25.85■■□□□ 1.73
TRAPPC3-207ENST00000497251 UNC13BO14795 1591 aa25.83■■□□□ 1.73
TRAPPC3-207ENST00000497251 NWD1Q149M9 1564 aa25.83■■□□□ 1.73
TRAPPC3-207ENST00000497251 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
TRAPPC3-207ENST00000497251 MSH6P52701 1360 aa25.82■■□□□ 1.72
TRAPPC3-207ENST00000497251 RIMS2Q9UQ26 1411 aa25.82■■□□□ 1.72
TRAPPC3-207ENST00000497251 NCOA3Q9Y6Q9 1424 aa25.82■■□□□ 1.72
TRAPPC3-207ENST00000497251 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC3-207ENST00000497251 PIK3R4Q99570 1358 aa25.79■■□□□ 1.72
TRAPPC3-207ENST00000497251 TMEM131LA2VDJ0 1609 aa25.78■■□□□ 1.72
TRAPPC3-207ENST00000497251 SLAIN2Q9P270 581 aa25.77■■□□□ 1.72
TRAPPC3-207ENST00000497251 NUP155O75694 1391 aa25.75■■□□□ 1.71
TRAPPC3-207ENST00000497251 CHGAP10645 457 aaKnown RBP25.74■■□□□ 1.71
TRAPPC3-207ENST00000497251 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
TRAPPC3-207ENST00000497251 CHD2O14647 1828 aaKnown RBP25.73■■□□□ 1.71
TRAPPC3-207ENST00000497251 DIP2AQ14689 1571 aa25.71■■□□□ 1.71
TRAPPC3-207ENST00000497251 E9PCH4 1651 aa25.71■■□□□ 1.71
TRAPPC3-207ENST00000497251 RBM33Q96EV2 1170 aaKnown RBP25.7■■□□□ 1.7
TRAPPC3-207ENST00000497251 ROBO1Q9Y6N7 1651 aa25.7■■□□□ 1.7
TRAPPC3-207ENST00000497251 MYO5BQ9ULV0 1848 aa25.7■■□□□ 1.7
TRAPPC3-207ENST00000497251 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
TRAPPC3-207ENST00000497251 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
TRAPPC3-207ENST00000497251 RGS17Q9UGC6 210 aaPredicted RBP25.68■■□□□ 1.7
TRAPPC3-207ENST00000497251 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
TRAPPC3-207ENST00000497251 JCADQ9P266 1359 aa25.65■■□□□ 1.7
TRAPPC3-207ENST00000497251 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
TRAPPC3-207ENST00000497251 ITGAEP38570 1179 aa25.63■■□□□ 1.69
TRAPPC3-207ENST00000497251 ATF3P18847 181 aa25.62■■□□□ 1.69
TRAPPC3-207ENST00000497251 TRPM2O94759 1503 aa25.6■■□□□ 1.69
TRAPPC3-207ENST00000497251 AMOTL2Q9Y2J4 779 aa25.6■■□□□ 1.69
TRAPPC3-207ENST00000497251 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC3-207ENST00000497251 DCCP43146 1447 aa25.56■■□□□ 1.68
TRAPPC3-207ENST00000497251 SPATA31A6Q5VVP1 1343 aa25.56■■□□□ 1.68
TRAPPC3-207ENST00000497251 PHLPP1O60346 1717 aa25.55■■□□□ 1.68
TRAPPC3-207ENST00000497251 ZNF326Q5BKZ1 582 aaKnown RBP25.53■■□□□ 1.68
TRAPPC3-207ENST00000497251 POTEAQ6S8J7 498 aa25.53■■□□□ 1.68
TRAPPC3-207ENST00000497251 SETBP1Q9Y6X0 1596 aa25.52■■□□□ 1.68
TRAPPC3-207ENST00000497251 RRBP1Q9P2E9 1410 aaKnown RBP25.52■■□□□ 1.68
TRAPPC3-207ENST00000497251 SPHKAPQ2M3C7 1700 aa25.51■■□□□ 1.67
TRAPPC3-207ENST00000497251 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC3-207ENST00000497251 PTPRUQ92729 1446 aa25.49■■□□□ 1.67
TRAPPC3-207ENST00000497251 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC3-207ENST00000497251 AHDC1Q5TGY3 1603 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC3-207ENST00000497251 PPARGC1BQ86YN6 1023 aaKnown RBP25.46■■□□□ 1.67
TRAPPC3-207ENST00000497251 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC3-207ENST00000497251 BRINP3Q76B58 766 aa25.45■■□□□ 1.66
TRAPPC3-207ENST00000497251 NAIPQ13075 1403 aa25.45■■□□□ 1.66
TRAPPC3-207ENST00000497251 VGFO15240 615 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC3-207ENST00000497251 XRN1Q8IZH2 1706 aaKnown RBP25.43■■□□□ 1.66
TRAPPC3-207ENST00000497251 NRXN3Q9Y4C0 1643 aa25.42■■□□□ 1.66
TRAPPC3-207ENST00000497251 RPGRIP1LQ68CZ1 1315 aa25.41■■□□□ 1.66
TRAPPC3-207ENST00000497251 MEX3CQ5U5Q3 659 aaKnown RBP25.41■■□□□ 1.66
TRAPPC3-207ENST00000497251 METP08581 1390 aa25.41■■□□□ 1.66
TRAPPC3-207ENST00000497251 HFM1A2PYH4 1435 aa25.38■■□□□ 1.65
TRAPPC3-207ENST00000497251 LRRC59Q96AG4 307 aaKnown RBP25.38■■□□□ 1.65
TRAPPC3-207ENST00000497251 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
TRAPPC3-207ENST00000497251 SETD5Q9C0A6 1442 aa25.37■■□□□ 1.65
TRAPPC3-207ENST00000497251 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
TRAPPC3-207ENST00000497251 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
TRAPPC3-207ENST00000497251 MST1RQ04912 1400 aa25.37■■□□□ 1.65
TRAPPC3-207ENST00000497251 CLTCL1P53675 1640 aa25.36■■□□□ 1.65
TRAPPC3-207ENST00000497251 KIF1BO60333 1816 aa25.35■■□□□ 1.65
TRAPPC3-207ENST00000497251 TRIM52Q96A61 297 aa25.35■■□□□ 1.65
TRAPPC3-207ENST00000497251 ASXL1Q8IXJ9 1541 aa25.34■■□□□ 1.65
TRAPPC3-207ENST00000497251 SLC4A1APQ9BWU0 796 aaKnown RBP25.33■■□□□ 1.65
TRAPPC3-207ENST00000497251 LRP6O75581 1613 aa25.33■■□□□ 1.65
TRAPPC3-207ENST00000497251 PTCH1Q13635 1447 aa25.31■■□□□ 1.64
TRAPPC3-207ENST00000497251 PRAG1Q86YV5 1406 aa25.31■■□□□ 1.64
TRAPPC3-207ENST00000497251 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
TRAPPC3-207ENST00000497251 RXRBP28702 533 aa25.27■■□□□ 1.64
TRAPPC3-207ENST00000497251 NHSL1Q5SYE7 1610 aa25.26■■□□□ 1.63
TRAPPC3-207ENST00000497251 CDK12Q9NYV4 1490 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC3-207ENST00000497251 NUTM2BA6NNL0 878 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC3-207ENST00000497251 NUTM2EB1AL46 878 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC3-207ENST00000497251 NUTM2AQ8IVF1 878 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC3-207ENST00000497251 C1orf167Q5SNV9 1468 aa25.22■■□□□ 1.63
TRAPPC3-207ENST00000497251 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
TRAPPC3-207ENST00000497251 PNPLA6Q8IY17 1366 aa25.2■■□□□ 1.63
TRAPPC3-207ENST00000497251 AFF2P51816 1311 aa25.19■■□□□ 1.62
TRAPPC3-207ENST00000497251 NALCNQ8IZF0 1738 aa25.19■■□□□ 1.62
TRAPPC3-207ENST00000497251 SOS2Q07890 1332 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC3-207ENST00000497251 LAMC1P11047 1609 aa25.18■■□□□ 1.62
TRAPPC3-207ENST00000497251 ANKRD30BQ9BXX2 1392 aa25.18■■□□□ 1.62
TRAPPC3-207ENST00000497251 CCDC144AA2RUR9 1427 aa25.16■■□□□ 1.62
TRAPPC3-207ENST00000497251 SETD1AO15047 1707 aaKnown RBP25.16■■□□□ 1.62
TRAPPC3-207ENST00000497251 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
TRAPPC3-207ENST00000497251 PPLO60437 1756 aa25.14■■□□□ 1.62
TRAPPC3-207ENST00000497251 RBM6P78332 1123 aaKnown RBP25.14■■□□□ 1.62
TRAPPC3-207ENST00000497251 DDX17Q92841 729 aaKnown RBP25.13■■□□□ 1.61
TRAPPC3-207ENST00000497251 C8orf37Q96NL8 207 aa25.12■■□□□ 1.61
TRAPPC3-207ENST00000497251 ORAI2Q96SN7 254 aa25.12■■□□□ 1.61
TRAPPC3-207ENST00000497251 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
TRAPPC3-207ENST00000497251 QTRT2Q9H974 415 aaKnown RBP25.12■■□□□ 1.61
TRAPPC3-207ENST00000497251 NPHP3Q7Z494 1330 aa25.11■■□□□ 1.61
TRAPPC3-207ENST00000497251 NGLY1Q96IV0 654 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms