RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SLC10A3P09131 477 aa5.09□□□□□ -1.6
SNRNP48-202ENST00000496946 STAC3Q96MF2 364 aa5.09□□□□□ -1.6
SNRNP48-202ENST00000496946 HPS5Q9UPZ3 1129 aa5.08□□□□□ -1.6
SNRNP48-202ENST00000496946 DDX11L8A8MPP1 907 aa5.08□□□□□ -1.6
SNRNP48-202ENST00000496946 NBPF26B4DH59 902 aa5.07□□□□□ -1.6
SNRNP48-202ENST00000496946 APLP1P51693 650 aa5.07□□□□□ -1.6
SNRNP48-202ENST00000496946 COPS2P61201 443 aa5.07□□□□□ -1.6
SNRNP48-202ENST00000496946 TTLL12Q14166 644 aaPredicted RBP5.07□□□□□ -1.6
SNRNP48-202ENST00000496946 SOWAHBA6NEL2 793 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 MAP2K5Q13163 448 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 TMEM134Q9H6X4 195 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 HOMEZQ8IX15 550 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 ZNF516Q92618 1163 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 LRCH3Q96II8 777 aa5.06□□□□□ -1.6
SNRNP48-202ENST00000496946 GUCA2AQ02747 115 aa5.05□□□□□ -1.6
SNRNP48-202ENST00000496946 ANKK1Q8NFD2 765 aa5.05□□□□□ -1.6
SNRNP48-202ENST00000496946 CERKQ8TCT0 537 aa5.05□□□□□ -1.6
SNRNP48-202ENST00000496946 SLC4A5Q9BY07 1137 aa5.05□□□□□ -1.6
SNRNP48-202ENST00000496946 TLL1O43897 1013 aa5.04□□□□□ -1.6
SNRNP48-202ENST00000496946 BARGINQ6ZT62 677 aa5.04□□□□□ -1.6
SNRNP48-202ENST00000496946 PARP9Q8IXQ6 854 aa5.04□□□□□ -1.6
SNRNP48-202ENST00000496946 NKX2-3Q8TAU0 364 aa5.04□□□□□ -1.6
SNRNP48-202ENST00000496946 FUT2Q10981 343 aa5.04□□□□□ -1.6
SNRNP48-202ENST00000496946 RBM46Q8TBY0 533 aaKnown RBP5.03□□□□□ -1.6
SNRNP48-202ENST00000496946 RBM27Q9P2N5 1060 aaKnown RBP5.03□□□□□ -1.6
SNRNP48-202ENST00000496946 MS4A1P11836 297 aa5.03□□□□□ -1.6
SNRNP48-202ENST00000496946 RDH13Q8NBN7 331 aa5.03□□□□□ -1.6
SNRNP48-202ENST00000496946 TRIM66O15016 1216 aa5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 DNAJB2P25686 324 aa5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 SYMPKQ92797 1274 aaKnown RBP5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 CFHP08603 1231 aa5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 GIGYF2Q6Y7W6 1299 aaKnown RBP5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 BCL11AQ9H165 835 aa5.02□□□□□ -1.61
SNRNP48-202ENST00000496946 PPP4CP60510 307 aa5.01□□□□□ -1.61
SNRNP48-202ENST00000496946 BLOC1S3Q6QNY0 202 aa5□□□□□ -1.61
SNRNP48-202ENST00000496946 MINK1Q8N4C8 1332 aaPredicted RBP5□□□□□ -1.61
SNRNP48-202ENST00000496946 OATP04181 439 aa4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 PDE4DQ08499 809 aa4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 MTRQ99707 1265 aa4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 FAM117AQ9C073 453 aa4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 TSR3Q9UJK0 312 aaKnown RBP4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 CSPP1Q1MSJ5 1256 aa4.99□□□□□ -1.61
SNRNP48-202ENST00000496946 FBXO31Q5XUX0 539 aaPredicted RBP4.98□□□□□ -1.61
SNRNP48-202ENST00000496946 LAPTM4BQ86VI4 370 aa4.98□□□□□ -1.61
SNRNP48-202ENST00000496946 PRDM9Q9NQV7 894 aa4.98□□□□□ -1.61
SNRNP48-202ENST00000496946 PODXL2Q9NZ53 605 aa4.98□□□□□ -1.61
SNRNP48-202ENST00000496946 RNF19BQ6ZMZ0 732 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 BEGAINQ9BUH8 593 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 GPCPD1Q9NPB8 672 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 FAM217BQ9NTX9 383 aaPredicted RBP4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 HCSTQ9UBK5 93 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 PPEF1O14829 653 aaPredicted RBP4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 NDUFV2P19404 249 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 SSTR3P32745 418 aaPredicted RBP4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 PLA2G2EQ9NZK7 142 aa4.97□□□□□ -1.61
SNRNP48-202ENST00000496946 HDGFP51858 240 aaKnown RBP4.96□□□□□ -1.62
SNRNP48-202ENST00000496946 BRPF1P55201 1214 aaPredicted RBP4.96□□□□□ -1.62
SNRNP48-202ENST00000496946 TJAP1Q5JTD0 557 aa4.96□□□□□ -1.62
SNRNP48-202ENST00000496946 IL27Q8NEV9 243 aa4.96□□□□□ -1.62
SNRNP48-202ENST00000496946 SLC27A5Q9Y2P5 690 aa4.96□□□□□ -1.62
SNRNP48-202ENST00000496946 NEUROD2Q15784 382 aa4.95□□□□□ -1.62
SNRNP48-202ENST00000496946 AK7Q96M32 723 aa4.95□□□□□ -1.62
SNRNP48-202ENST00000496946 KDM4CQ9H3R0 1056 aa4.95□□□□□ -1.62
SNRNP48-202ENST00000496946 POLR3EQ9NVU0 708 aa4.95□□□□□ -1.62
SNRNP48-202ENST00000496946 PCDHB3Q9Y5E6 796 aa4.95□□□□□ -1.62
SNRNP48-202ENST00000496946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 MOXD2PA6NHM9 499 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 SLF2Q8IX21 1173 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 SCUBE3Q8IX30 993 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 PCDHGC3Q9UN70 934 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 PCDHB15Q9Y5E8 787 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 CD46P15529 392 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 QPCTQ16769 361 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 TMUB1Q9BVT8 246 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 GTF3C3Q9Y5Q9 886 aa4.94□□□□□ -1.62
SNRNP48-202ENST00000496946 AMHR2Q16671 573 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 PLEKHG3A1L390 1219 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 KDM4AO75164 1064 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 S1PR4O95977 384 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 CLCN1P35523 988 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 GCGRP47871 477 aa4.93□□□□□ -1.62
SNRNP48-202ENST00000496946 PLA2G2CQ5R387 149 aa4.92□□□□□ -1.62
SNRNP48-202ENST00000496946 PPP1R18Q6NYC8 613 aa4.92□□□□□ -1.62
SNRNP48-202ENST00000496946 LIMD1Q9UGP4 676 aa4.92□□□□□ -1.62
SNRNP48-202ENST00000496946 ZPR1O75312 459 aa4.91□□□□□ -1.62
SNRNP48-202ENST00000496946 SPIRE2Q8WWL2 714 aa4.91□□□□□ -1.62
SNRNP48-202ENST00000496946 HOXA2O43364 376 aa4.91□□□□□ -1.62
SNRNP48-202ENST00000496946 PROCA1Q8NCQ7 364 aaPredicted RBP4.91□□□□□ -1.62
SNRNP48-202ENST00000496946 MORN1Q5T089 497 aa4.9□□□□□ -1.62
SNRNP48-202ENST00000496946 CABLES1Q8TDN4 633 aa4.9□□□□□ -1.62
SNRNP48-202ENST00000496946 TSC1Q92574 1164 aa4.9□□□□□ -1.62
SNRNP48-202ENST00000496946 TBC1D2Q9BYX2 928 aa4.9□□□□□ -1.62
SNRNP48-202ENST00000496946 ACTN4O43707 911 aaKnown RBP4.9□□□□□ -1.63
SNRNP48-202ENST00000496946 SULF1Q8IWU6 871 aa4.9□□□□□ -1.63
SNRNP48-202ENST00000496946 FAM9AQ8IZU1 332 aaPredicted RBP4.9□□□□□ -1.63
SNRNP48-202ENST00000496946 ATP1B4Q9UN42 357 aaPredicted RBP4.89□□□□□ -1.63
SNRNP48-202ENST00000496946 KCNC4Q03721 635 aa4.89□□□□□ -1.63
SNRNP48-202ENST00000496946 MYSM1Q5VVJ2 828 aa4.89□□□□□ -1.63
SNRNP48-202ENST00000496946 EMID1Q96A84 441 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms