RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 POTEMA6NI47 508 aa6.99□□□□□ -1.29
EXOSC3-208ENST00000496910 ARXQ96QS3 562 aa6.99□□□□□ -1.29
EXOSC3-208ENST00000496910 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
EXOSC3-208ENST00000496910 FAM217BQ9NTX9 383 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-208ENST00000496910 SEPT9Q9UHD8 586 aaPredicted RBP6.99□□□□□ -1.29
EXOSC3-208ENST00000496910 CLCN1P35523 988 aa6.98□□□□□ -1.29
EXOSC3-208ENST00000496910 FAM117AQ9C073 453 aa6.98□□□□□ -1.29
EXOSC3-208ENST00000496910 DNAJB2P25686 324 aa6.97□□□□□ -1.29
EXOSC3-208ENST00000496910 TTLL12Q14166 644 aaPredicted RBP6.97□□□□□ -1.29
EXOSC3-208ENST00000496910 ERCC6L2Q5T890 1561 aa6.97□□□□□ -1.29
EXOSC3-208ENST00000496910 FAM98CQ17RN3 349 aaKnown RBP6.96□□□□□ -1.3
EXOSC3-208ENST00000496910 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
EXOSC3-208ENST00000496910 TMEM132AQ24JP5 1023 aa6.95□□□□□ -1.3
EXOSC3-208ENST00000496910 CDAN1Q8IWY9 1227 aa6.95□□□□□ -1.3
EXOSC3-208ENST00000496910 CD46P15529 392 aa6.94□□□□□ -1.3
EXOSC3-208ENST00000496910 SSTR3P32745 418 aaPredicted RBP6.94□□□□□ -1.3
EXOSC3-208ENST00000496910 SWT1Q5T5J6 900 aaKnown RBP6.93□□□□□ -1.3
EXOSC3-208ENST00000496910 ANKRD13DQ6ZTN6 518 aa6.93□□□□□ -1.3
EXOSC3-208ENST00000496910 NBPF3Q9H094 633 aa6.93□□□□□ -1.3
EXOSC3-208ENST00000496910 SLC10A3P09131 477 aa6.92□□□□□ -1.3
EXOSC3-208ENST00000496910 ZFRQ96KR1 1074 aaKnown RBP6.92□□□□□ -1.3
EXOSC3-208ENST00000496910 SAMD7Q7Z3H4 446 aa6.91□□□□□ -1.3
EXOSC3-208ENST00000496910 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
EXOSC3-208ENST00000496910 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.3
EXOSC3-208ENST00000496910 DDRGK1Q96HY6 314 aa6.9□□□□□ -1.3
EXOSC3-208ENST00000496910 BEGAINQ9BUH8 593 aa6.89□□□□□ -1.31
EXOSC3-208ENST00000496910 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
EXOSC3-208ENST00000496910 SULF1Q8IWU6 871 aa6.87□□□□□ -1.31
EXOSC3-208ENST00000496910 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
EXOSC3-208ENST00000496910 RIMBP3CA6NJZ7 1639 aa6.87□□□□□ -1.31
EXOSC3-208ENST00000496910 RIMBP3BA6NNM3 1639 aa6.87□□□□□ -1.31
EXOSC3-208ENST00000496910 RIMBP3Q9UFD9 1639 aa6.87□□□□□ -1.31
EXOSC3-208ENST00000496910 SOWAHBA6NEL2 793 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 GCGRP47871 477 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 SH3D19Q5HYK7 790 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 IFFO2Q5TF58 517 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 SPIRE2Q8WWL2 714 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 GOPCQ9HD26 462 aa6.86□□□□□ -1.31
EXOSC3-208ENST00000496910 BCAMP50895 628 aa6.85□□□□□ -1.31
EXOSC3-208ENST00000496910 MYSM1Q5VVJ2 828 aa6.85□□□□□ -1.31
EXOSC3-208ENST00000496910 TBC1D2Q9BYX2 928 aa6.85□□□□□ -1.31
EXOSC3-208ENST00000496910 SPATA31D1Q6ZQQ2 1576 aa6.85□□□□□ -1.31
EXOSC3-208ENST00000496910 FBXO31Q5XUX0 539 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-208ENST00000496910 SLF2Q8IX21 1173 aa6.84□□□□□ -1.31
EXOSC3-208ENST00000496910 LRCH3Q96II8 777 aa6.84□□□□□ -1.31
EXOSC3-208ENST00000496910 THSD4Q6ZMP0 1018 aa6.83□□□□□ -1.32
EXOSC3-208ENST00000496910 ANKK1Q8NFD2 765 aa6.83□□□□□ -1.32
EXOSC3-208ENST00000496910 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-208ENST00000496910 ERCC6Q03468 1493 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 CFHP08603 1231 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 RDH13Q8NBN7 331 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 WNT2BQ93097 391 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 PCDH10Q9P2E7 1040 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 LIMD1Q9UGP4 676 aa6.82□□□□□ -1.32
EXOSC3-208ENST00000496910 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 HOXA2O43364 376 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 KDM4AO75164 1064 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 APLP1P51693 650 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 SKIV2LQ15477 1246 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 HLA-CQ95604 372 aa6.81□□□□□ -1.32
EXOSC3-208ENST00000496910 SPTLC1O15269 473 aa6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 RSBN1LQ6PCB5 846 aaPredicted RBP6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 SPNS2Q8IVW8 549 aa6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 TSR3Q9UJK0 312 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 NISCHQ9Y2I1 1504 aa6.8□□□□□ -1.32
EXOSC3-208ENST00000496910 ACTN4O43707 911 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 NDUFV2P19404 249 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 GJA5P36382 358 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 FUT2Q10981 343 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 TUSC1Q2TAM9 212 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 RSPH6AQ9H0K4 717 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 WBP1LQ9NX94 342 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 PCDHGC3Q9UN70 934 aa6.79□□□□□ -1.32
EXOSC3-208ENST00000496910 RNF40O75150 1001 aa6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 HDGFP51858 240 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 USP46P62068 366 aa6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 GUCA2AQ02747 115 aa6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 KCTD12Q96CX2 325 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 HECW2Q9P2P5 1572 aa6.78□□□□□ -1.32
EXOSC3-208ENST00000496910 GOLGA8CPA6NN73 597 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 POLR3EQ9NVU0 708 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 MYT1LQ9UL68 1186 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 PCDHB15Q9Y5E8 787 aa6.77□□□□□ -1.33
EXOSC3-208ENST00000496910 MORN1Q5T089 497 aa6.76□□□□□ -1.33
EXOSC3-208ENST00000496910 RSPH4AQ5TD94 716 aa6.76□□□□□ -1.33
EXOSC3-208ENST00000496910 NUTM1Q86Y26 1132 aa6.76□□□□□ -1.33
EXOSC3-208ENST00000496910 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
EXOSC3-208ENST00000496910 LILRB3O75022 631 aa6.75□□□□□ -1.33
EXOSC3-208ENST00000496910 PPP4CP60510 307 aa6.75□□□□□ -1.33
EXOSC3-208ENST00000496910 QPCTQ16769 361 aa6.75□□□□□ -1.33
EXOSC3-208ENST00000496910 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
EXOSC3-208ENST00000496910 ATP6V1AP38606 617 aa6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 SLC4A3P48751 1232 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms