RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 PPLO60437 1756 aa26.26■■□□□ 1.79
RGP1-202ENST00000496906 TMEM2Q9UHN6 1383 aa26.26■■□□□ 1.79
RGP1-202ENST00000496906 MYOM2P54296 1465 aa26.25■■□□□ 1.79
RGP1-202ENST00000496906 STAC3Q96MF2 364 aa26.25■■□□□ 1.79
RGP1-202ENST00000496906 ZFYVE9O95405 1425 aa26.25■■□□□ 1.79
RGP1-202ENST00000496906 THEMISQ8N1K5 641 aaPredicted RBP26.24■■□□□ 1.79
RGP1-202ENST00000496906 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
RGP1-202ENST00000496906 RIMS2Q9UQ26 1411 aa26.24■■□□□ 1.79
RGP1-202ENST00000496906 SLIT1O75093 1534 aa26.23■■□□□ 1.79
RGP1-202ENST00000496906 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
RGP1-202ENST00000496906 NRXN1Q9ULB1 1477 aa26.21■■□□□ 1.79
RGP1-202ENST00000496906 PRAG1Q86YV5 1406 aa26.21■■□□□ 1.79
RGP1-202ENST00000496906 ADGRF5Q8IZF2 1346 aa26.19■■□□□ 1.78
RGP1-202ENST00000496906 LMTK3Q96Q04 1460 aa26.18■■□□□ 1.78
RGP1-202ENST00000496906 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
RGP1-202ENST00000496906 NUTM2DQ5VT03 806 aaPredicted RBP26.18■■□□□ 1.78
RGP1-202ENST00000496906 NBPF8Q3BBV2 869 aa26.17■■□□□ 1.78
RGP1-202ENST00000496906 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
RGP1-202ENST00000496906 HDGFP51858 240 aaKnown RBP26.16■■□□□ 1.78
RGP1-202ENST00000496906 PIK3C2GO75747 1445 aa26.15■■□□□ 1.78
RGP1-202ENST00000496906 LTKP29376 864 aa26.13■■□□□ 1.77
RGP1-202ENST00000496906 TXNDC2Q86VQ3 553 aa26.12■■□□□ 1.77
RGP1-202ENST00000496906 EID1Q9Y6B2 187 aa26.12■■□□□ 1.77
RGP1-202ENST00000496906 SCAF11Q99590 1463 aaKnown RBP26.12■■□□□ 1.77
RGP1-202ENST00000496906 RALGAPBQ86X10 1494 aa26.08■■□□□ 1.77
RGP1-202ENST00000496906 PLEKHG1Q9ULL1 1385 aa26.08■■□□□ 1.77
RGP1-202ENST00000496906 TRPM1Q7Z4N2 1603 aa26.07■■□□□ 1.76
RGP1-202ENST00000496906 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
RGP1-202ENST00000496906 SETBP1Q9Y6X0 1596 aa26.06■■□□□ 1.76
RGP1-202ENST00000496906 HSPA2P54652 639 aa26.05■■□□□ 1.76
RGP1-202ENST00000496906 KIAA1210Q9ULL0 1709 aa26.05■■□□□ 1.76
RGP1-202ENST00000496906 NRXN3Q9Y4C0 1643 aa26.04■■□□□ 1.76
RGP1-202ENST00000496906 C14orf93Q9H972 538 aaKnown RBP26.03■■□□□ 1.76
RGP1-202ENST00000496906 CFAP70Q5T0N1 1121 aa26.03■■□□□ 1.76
RGP1-202ENST00000496906 LAMC1P11047 1609 aa26.02■■□□□ 1.76
RGP1-202ENST00000496906 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
RGP1-202ENST00000496906 IQGAP1P46940 1657 aa26.01■■□□□ 1.75
RGP1-202ENST00000496906 SENP3Q9H4L4 574 aaPredicted RBP26.01■■□□□ 1.75
RGP1-202ENST00000496906 ALKQ9UM73 1620 aa26■■□□□ 1.75
RGP1-202ENST00000496906 MED14O60244 1454 aa26■■□□□ 1.75
RGP1-202ENST00000496906 ROCK2O75116 1388 aaKnown RBP26■■□□□ 1.75
RGP1-202ENST00000496906 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
RGP1-202ENST00000496906 NBPF1Q3BBV0 1214 aa26■■□□□ 1.75
RGP1-202ENST00000496906 ADAMTS13Q76LX8 1427 aa26■■□□□ 1.75
RGP1-202ENST00000496906 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
RGP1-202ENST00000496906 SETD1AO15047 1707 aaKnown RBP25.97■■□□□ 1.75
RGP1-202ENST00000496906 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
RGP1-202ENST00000496906 ADGRB1O14514 1584 aa25.96■■□□□ 1.75
RGP1-202ENST00000496906 BCANQ96GW7 911 aa25.96■■□□□ 1.75
RGP1-202ENST00000496906 ASXL1Q8IXJ9 1541 aa25.96■■□□□ 1.75
RGP1-202ENST00000496906 STRCQ7RTU9 1775 aa25.94■■□□□ 1.74
RGP1-202ENST00000496906 DIP2AQ14689 1571 aa25.94■■□□□ 1.74
RGP1-202ENST00000496906 CARD11Q9BXL7 1154 aa25.94■■□□□ 1.74
RGP1-202ENST00000496906 SLC26A8Q96RN1 970 aa25.91■■□□□ 1.74
RGP1-202ENST00000496906 TMEM132EQ6IEE7 984 aa25.9■■□□□ 1.74
RGP1-202ENST00000496906 TBX22Q9Y458 520 aa25.9■■□□□ 1.74
RGP1-202ENST00000496906 METP08581 1390 aa25.9■■□□□ 1.74
RGP1-202ENST00000496906 USP47Q96K76 1375 aa25.85■■□□□ 1.73
RGP1-202ENST00000496906 YTHDC2Q9H6S0 1430 aaKnown RBP25.85■■□□□ 1.73
RGP1-202ENST00000496906 LRPPRCP42704 1394 aaKnown RBP25.83■■□□□ 1.73
RGP1-202ENST00000496906 PIK3R4Q99570 1358 aa25.83■■□□□ 1.73
RGP1-202ENST00000496906 EIF4G2P78344 907 aaKnown RBP eCLIP25.82■■□□□ 1.72
RGP1-202ENST00000496906 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
RGP1-202ENST00000496906 ABCC11Q96J66 1382 aa25.79■■□□□ 1.72
RGP1-202ENST00000496906 TRAK1Q9UPV9 953 aa25.79■■□□□ 1.72
RGP1-202ENST00000496906 TECPR2O15040 1411 aa25.79■■□□□ 1.72
RGP1-202ENST00000496906 HSPA5P11021 654 aaKnown RBP25.78■■□□□ 1.72
RGP1-202ENST00000496906 STK26Q9P289 416 aa25.78■■□□□ 1.72
RGP1-202ENST00000496906 EIF3AQ14152 1382 aaKnown RBP25.78■■□□□ 1.72
RGP1-202ENST00000496906 KNDC1Q76NI1 1749 aa25.77■■□□□ 1.72
RGP1-202ENST00000496906 DLC1Q96QB1 1528 aa25.77■■□□□ 1.72
RGP1-202ENST00000496906 ARHGEF28Q8N1W1 1705 aaKnown RBP25.76■■□□□ 1.71
RGP1-202ENST00000496906 XRN1Q8IZH2 1706 aaKnown RBP25.75■■□□□ 1.71
RGP1-202ENST00000496906 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
RGP1-202ENST00000496906 CPS1P31327 1500 aa25.75■■□□□ 1.71
RGP1-202ENST00000496906 AMOTL2Q9Y2J4 779 aa25.74■■□□□ 1.71
RGP1-202ENST00000496906 ST20-MTHFSA0A0A6YYL1 179 aa25.73■■□□□ 1.71
RGP1-202ENST00000496906 CHD2O14647 1828 aaKnown RBP25.73■■□□□ 1.71
RGP1-202ENST00000496906 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
RGP1-202ENST00000496906 PTCH1Q13635 1447 aa25.71■■□□□ 1.71
RGP1-202ENST00000496906 HIRIP3Q9BW71 556 aaPredicted RBP25.71■■□□□ 1.71
RGP1-202ENST00000496906 ROBO2Q9HCK4 1378 aa25.7■■□□□ 1.71
RGP1-202ENST00000496906 FAM135BQ49AJ0 1406 aa25.7■■□□□ 1.7
RGP1-202ENST00000496906 KCNA6P17658 529 aa25.69■■□□□ 1.7
RGP1-202ENST00000496906 SIRT1Q96EB6 747 aa25.69■■□□□ 1.7
RGP1-202ENST00000496906 CENPJQ9HC77 1338 aaPredicted RBP25.69■■□□□ 1.7
RGP1-202ENST00000496906 PRAM1Q96QH2 718 aa25.68■■□□□ 1.7
RGP1-202ENST00000496906 TESK2Q96S53 571 aa25.66■■□□□ 1.7
RGP1-202ENST00000496906 PLEKHH1Q9ULM0 1364 aa25.66■■□□□ 1.7
RGP1-202ENST00000496906 SBNO2Q9Y2G9 1366 aa25.65■■□□□ 1.7
RGP1-202ENST00000496906 WAPLQ7Z5K2 1190 aa25.65■■□□□ 1.7
RGP1-202ENST00000496906 POGKQ9P215 609 aa25.65■■□□□ 1.7
RGP1-202ENST00000496906 QRICH2Q9H0J4 1663 aa25.64■■□□□ 1.7
RGP1-202ENST00000496906 NKTRP30414 1462 aaKnown RBP25.63■■□□□ 1.69
RGP1-202ENST00000496906 SAFB2Q14151 953 aaKnown RBP eCLIP25.62■■□□□ 1.69
RGP1-202ENST00000496906 STRCP1A6NGW2 1772 aa25.61■■□□□ 1.69
RGP1-202ENST00000496906 ZNF316A6NFI3 1004 aaPredicted RBP25.6■■□□□ 1.69
RGP1-202ENST00000496906 ZNF335Q9H4Z2 1342 aaPredicted RBP25.6■■□□□ 1.69
RGP1-202ENST00000496906 SLC24A1O60721 1099 aa25.56■■□□□ 1.68
RGP1-202ENST00000496906 MINK1Q8N4C8 1332 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms