RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
ATPAF2-208ENST00000496852 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
ATPAF2-208ENST00000496852 POLR1AO95602 1720 aaPredicted RBP20.13■□□□□ 0.81
ATPAF2-208ENST00000496852 LMTK3Q96Q04 1460 aa20.12■□□□□ 0.81
ATPAF2-208ENST00000496852 TMEM2Q9UHN6 1383 aa20.12■□□□□ 0.81
ATPAF2-208ENST00000496852 RIMS2Q9UQ26 1411 aa20.11■□□□□ 0.81
ATPAF2-208ENST00000496852 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
ATPAF2-208ENST00000496852 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
ATPAF2-208ENST00000496852 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
ATPAF2-208ENST00000496852 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
ATPAF2-208ENST00000496852 KIAA1210Q9ULL0 1709 aa20.07■□□□□ 0.8
ATPAF2-208ENST00000496852 TRPM1Q7Z4N2 1603 aa20.07■□□□□ 0.8
ATPAF2-208ENST00000496852 PPP1R15AO75807 674 aaPredicted RBP20.07■□□□□ 0.8
ATPAF2-208ENST00000496852 KDM2AQ9Y2K7 1162 aa20.07■□□□□ 0.8
ATPAF2-208ENST00000496852 IQGAP1P46940 1657 aa20.06■□□□□ 0.8
ATPAF2-208ENST00000496852 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
ATPAF2-208ENST00000496852 NRXN3Q9Y4C0 1643 aa20.06■□□□□ 0.8
ATPAF2-208ENST00000496852 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
ATPAF2-208ENST00000496852 LAMC1P11047 1609 aa20.04■□□□□ 0.8
ATPAF2-208ENST00000496852 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
ATPAF2-208ENST00000496852 ADGRF5Q8IZF2 1346 aa20.04■□□□□ 0.8
ATPAF2-208ENST00000496852 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-208ENST00000496852 NUTM2DQ5VT03 806 aaPredicted RBP20.03■□□□□ 0.8
ATPAF2-208ENST00000496852 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.03■□□□□ 0.8
ATPAF2-208ENST00000496852 PIK3C2GO75747 1445 aa20.03■□□□□ 0.8
ATPAF2-208ENST00000496852 STRCQ7RTU9 1775 aa20.03■□□□□ 0.8
ATPAF2-208ENST00000496852 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
ATPAF2-208ENST00000496852 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
ATPAF2-208ENST00000496852 LTKP29376 864 aa20.02■□□□□ 0.8
ATPAF2-208ENST00000496852 NBPF8Q3BBV2 869 aa20.01■□□□□ 0.79
ATPAF2-208ENST00000496852 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
ATPAF2-208ENST00000496852 EID1Q9Y6B2 187 aa20■□□□□ 0.79
ATPAF2-208ENST00000496852 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
ATPAF2-208ENST00000496852 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
ATPAF2-208ENST00000496852 MED14O60244 1454 aa19.98■□□□□ 0.79
ATPAF2-208ENST00000496852 RALGAPBQ86X10 1494 aa19.98■□□□□ 0.79
ATPAF2-208ENST00000496852 HSPA2P54652 639 aa19.97■□□□□ 0.79
ATPAF2-208ENST00000496852 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
ATPAF2-208ENST00000496852 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
ATPAF2-208ENST00000496852 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
ATPAF2-208ENST00000496852 ASXL1Q8IXJ9 1541 aa19.93■□□□□ 0.78
ATPAF2-208ENST00000496852 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
ATPAF2-208ENST00000496852 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
ATPAF2-208ENST00000496852 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
ATPAF2-208ENST00000496852 NPHP4O75161 1426 aaPredicted RBP19.92■□□□□ 0.78
ATPAF2-208ENST00000496852 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
ATPAF2-208ENST00000496852 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
ATPAF2-208ENST00000496852 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
ATPAF2-208ENST00000496852 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
ATPAF2-208ENST00000496852 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
ATPAF2-208ENST00000496852 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
ATPAF2-208ENST00000496852 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
ATPAF2-208ENST00000496852 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
ATPAF2-208ENST00000496852 BCANQ96GW7 911 aa19.87■□□□□ 0.77
ATPAF2-208ENST00000496852 ARHGEF28Q8N1W1 1705 aaKnown RBP19.86■□□□□ 0.77
ATPAF2-208ENST00000496852 TBX22Q9Y458 520 aa19.85■□□□□ 0.77
ATPAF2-208ENST00000496852 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
ATPAF2-208ENST00000496852 METP08581 1390 aa19.84■□□□□ 0.77
ATPAF2-208ENST00000496852 XRN1Q8IZH2 1706 aaKnown RBP19.83■□□□□ 0.77
ATPAF2-208ENST00000496852 TMEM132EQ6IEE7 984 aa19.82■□□□□ 0.76
ATPAF2-208ENST00000496852 CARD11Q9BXL7 1154 aa19.81■□□□□ 0.76
ATPAF2-208ENST00000496852 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
ATPAF2-208ENST00000496852 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
ATPAF2-208ENST00000496852 STRCP1A6NGW2 1772 aa19.8■□□□□ 0.76
ATPAF2-208ENST00000496852 NWD1Q149M9 1564 aa19.79■□□□□ 0.76
ATPAF2-208ENST00000496852 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
ATPAF2-208ENST00000496852 CPS1P31327 1500 aa19.79■□□□□ 0.76
ATPAF2-208ENST00000496852 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
ATPAF2-208ENST00000496852 LRPPRCP42704 1394 aaKnown RBP19.78■□□□□ 0.76
ATPAF2-208ENST00000496852 TECPR2O15040 1411 aa19.76■□□□□ 0.75
ATPAF2-208ENST00000496852 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
ATPAF2-208ENST00000496852 ABCC11Q96J66 1382 aa19.76■□□□□ 0.75
ATPAF2-208ENST00000496852 USP47Q96K76 1375 aa19.76■□□□□ 0.75
ATPAF2-208ENST00000496852 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
ATPAF2-208ENST00000496852 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
ATPAF2-208ENST00000496852 STK26Q9P289 416 aa19.72■□□□□ 0.75
ATPAF2-208ENST00000496852 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATPAF2-208ENST00000496852 AMOTL2Q9Y2J4 779 aa19.71■□□□□ 0.75
ATPAF2-208ENST00000496852 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
ATPAF2-208ENST00000496852 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
ATPAF2-208ENST00000496852 FAM135BQ49AJ0 1406 aa19.7■□□□□ 0.74
ATPAF2-208ENST00000496852 XIRP1Q702N8 1843 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-208ENST00000496852 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-208ENST00000496852 KCNA6P17658 529 aa19.69■□□□□ 0.74
ATPAF2-208ENST00000496852 NKTRP30414 1462 aaKnown RBP19.69■□□□□ 0.74
ATPAF2-208ENST00000496852 ROBO2Q9HCK4 1378 aa19.69■□□□□ 0.74
ATPAF2-208ENST00000496852 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
ATPAF2-208ENST00000496852 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
ATPAF2-208ENST00000496852 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
ATPAF2-208ENST00000496852 NALCNQ8IZF0 1738 aa19.66■□□□□ 0.74
ATPAF2-208ENST00000496852 CENPJQ9HC77 1338 aaPredicted RBP19.65■□□□□ 0.74
ATPAF2-208ENST00000496852 PLEKHH1Q9ULM0 1364 aa19.65■□□□□ 0.74
ATPAF2-208ENST00000496852 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
ATPAF2-208ENST00000496852 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
ATPAF2-208ENST00000496852 WAPLQ7Z5K2 1190 aa19.63■□□□□ 0.73
ATPAF2-208ENST00000496852 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
ATPAF2-208ENST00000496852 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
ATPAF2-208ENST00000496852 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
ATPAF2-208ENST00000496852 TESK2Q96S53 571 aa19.62■□□□□ 0.73
ATPAF2-208ENST00000496852 POGKQ9P215 609 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms