RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 POLR1AO95602 1720 aaPredicted RBP29.69■■■□□ 2.34
TSC22D4-206ENST00000496728 ZFYVE9O95405 1425 aa29.66■■■□□ 2.34
TSC22D4-206ENST00000496728 BCANQ96GW7 911 aa29.65■■■□□ 2.34
TSC22D4-206ENST00000496728 NUTM2DQ5VT03 806 aaPredicted RBP29.64■■■□□ 2.34
TSC22D4-206ENST00000496728 ANKRD30BQ9BXX2 1392 aa29.62■■■□□ 2.33
TSC22D4-206ENST00000496728 MYO5BQ9ULV0 1848 aa29.61■■■□□ 2.33
TSC22D4-206ENST00000496728 IQGAP1P46940 1657 aa29.6■■■□□ 2.33
TSC22D4-206ENST00000496728 RPGRIP1LQ68CZ1 1315 aa29.59■■■□□ 2.33
TSC22D4-206ENST00000496728 ZNF335Q9H4Z2 1342 aaPredicted RBP29.59■■■□□ 2.33
TSC22D4-206ENST00000496728 PLEKHG1Q9ULL1 1385 aa29.59■■■□□ 2.33
TSC22D4-206ENST00000496728 RGL3Q3MIN7 710 aa29.58■■■□□ 2.33
TSC22D4-206ENST00000496728 KIF1BO60333 1816 aa29.57■■■□□ 2.32
TSC22D4-206ENST00000496728 SENP3Q9H4L4 574 aaPredicted RBP29.57■■■□□ 2.32
TSC22D4-206ENST00000496728 SLC26A8Q96RN1 970 aa29.56■■■□□ 2.32
TSC22D4-206ENST00000496728 PCGF6Q9BYE7 350 aa29.56■■■□□ 2.32
TSC22D4-206ENST00000496728 VGFO15240 615 aaPredicted RBP29.54■■■□□ 2.32
TSC22D4-206ENST00000496728 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
TSC22D4-206ENST00000496728 CERKQ8TCT0 537 aa29.5■■■□□ 2.31
TSC22D4-206ENST00000496728 TBX22Q9Y458 520 aa29.49■■■□□ 2.31
TSC22D4-206ENST00000496728 NEXMIFQ5QGS0 1516 aa29.48■■■□□ 2.31
TSC22D4-206ENST00000496728 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.31
TSC22D4-206ENST00000496728 DHX57Q6P158 1386 aaKnown RBP29.44■■■□□ 2.3
TSC22D4-206ENST00000496728 ADAMTS13Q76LX8 1427 aa29.42■■■□□ 2.3
TSC22D4-206ENST00000496728 KCNA6P17658 529 aa29.41■■■□□ 2.3
TSC22D4-206ENST00000496728 CPS1P31327 1500 aa29.39■■■□□ 2.3
TSC22D4-206ENST00000496728 ADGRF5Q8IZF2 1346 aa29.37■■■□□ 2.29
TSC22D4-206ENST00000496728 SETBP1Q9Y6X0 1596 aa29.36■■■□□ 2.29
TSC22D4-206ENST00000496728 PIK3R4Q99570 1358 aa29.36■■■□□ 2.29
TSC22D4-206ENST00000496728 DIP2AQ14689 1571 aa29.35■■■□□ 2.29
TSC22D4-206ENST00000496728 PPLO60437 1756 aa29.34■■■□□ 2.29
TSC22D4-206ENST00000496728 DCAF11Q8TEB1 546 aa29.32■■■□□ 2.28
TSC22D4-206ENST00000496728 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
TSC22D4-206ENST00000496728 KDM2AQ9Y2K7 1162 aa29.31■■■□□ 2.28
TSC22D4-206ENST00000496728 PROSER2Q86WR7 435 aaPredicted RBP29.3■■■□□ 2.28
TSC22D4-206ENST00000496728 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
TSC22D4-206ENST00000496728 NEUROD1Q13562 356 aa29.29■■■□□ 2.28
TSC22D4-206ENST00000496728 IQSEC2Q5JU85 1478 aa29.29■■■□□ 2.28
TSC22D4-206ENST00000496728 METP08581 1390 aa29.28■■■□□ 2.28
TSC22D4-206ENST00000496728 NRXN3Q9Y4C0 1643 aa29.28■■■□□ 2.28
TSC22D4-206ENST00000496728 AMOTL2Q9Y2J4 779 aa29.28■■■□□ 2.28
TSC22D4-206ENST00000496728 LRRC7Q96NW7 1537 aa29.26■■■□□ 2.27
TSC22D4-206ENST00000496728 MYOM2P54296 1465 aa29.26■■■□□ 2.27
TSC22D4-206ENST00000496728 STRCP1A6NGW2 1772 aa29.25■■■□□ 2.27
TSC22D4-206ENST00000496728 ALKQ9UM73 1620 aa29.24■■■□□ 2.27
TSC22D4-206ENST00000496728 FBXO41Q8TF61 875 aa29.24■■■□□ 2.27
TSC22D4-206ENST00000496728 IFT172Q9UG01 1749 aa29.24■■■□□ 2.27
TSC22D4-206ENST00000496728 NKTRP30414 1462 aaKnown RBP29.23■■■□□ 2.27
TSC22D4-206ENST00000496728 NWD1Q149M9 1564 aa29.23■■■□□ 2.27
TSC22D4-206ENST00000496728 PIK3C2GO75747 1445 aa29.23■■■□□ 2.27
TSC22D4-206ENST00000496728 PTPRUQ92729 1446 aa29.22■■■□□ 2.27
TSC22D4-206ENST00000496728 C14orf93Q9H972 538 aaKnown RBP29.21■■■□□ 2.27
TSC22D4-206ENST00000496728 TMEM94Q12767 1356 aa29.21■■■□□ 2.27
TSC22D4-206ENST00000496728 NRXN1Q9ULB1 1477 aa29.2■■■□□ 2.26
TSC22D4-206ENST00000496728 CHD2O14647 1828 aaKnown RBP29.2■■■□□ 2.26
TSC22D4-206ENST00000496728 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
TSC22D4-206ENST00000496728 UBAP1LF5GYI3 381 aa29.17■■■□□ 2.26
TSC22D4-206ENST00000496728 CFAP70Q5T0N1 1121 aa29.17■■■□□ 2.26
TSC22D4-206ENST00000496728 L3MBTL2Q969R5 705 aa29.16■■■□□ 2.26
TSC22D4-206ENST00000496728 TOM1O60784 492 aa29.15■■■□□ 2.26
TSC22D4-206ENST00000496728 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
TSC22D4-206ENST00000496728 C14orf37Q86TY3 774 aa29.14■■■□□ 2.26
TSC22D4-206ENST00000496728 STK26Q9P289 416 aa29.12■■■□□ 2.25
TSC22D4-206ENST00000496728 NCOA3Q9Y6Q9 1424 aa29.11■■■□□ 2.25
TSC22D4-206ENST00000496728 ILDR1Q86SU0 546 aaPredicted RBP29.1■■■□□ 2.25
TSC22D4-206ENST00000496728 SETD1AO15047 1707 aaKnown RBP29.1■■■□□ 2.25
TSC22D4-206ENST00000496728 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
TSC22D4-206ENST00000496728 XRN1Q8IZH2 1706 aaKnown RBP29.08■■■□□ 2.25
TSC22D4-206ENST00000496728 MSH6P52701 1360 aa29.08■■■□□ 2.25
TSC22D4-206ENST00000496728 TONSLQ96HA7 1378 aa29.07■■■□□ 2.24
TSC22D4-206ENST00000496728 CLSPNQ9HAW4 1339 aa29.07■■■□□ 2.24
TSC22D4-206ENST00000496728 CCER1Q8TC90 406 aaPredicted RBP29.06■■■□□ 2.24
TSC22D4-206ENST00000496728 ABCC11Q96J66 1382 aa29.05■■■□□ 2.24
TSC22D4-206ENST00000496728 C19orf44Q9H6X5 657 aa29.05■■■□□ 2.24
TSC22D4-206ENST00000496728 LAMC1P11047 1609 aa29.05■■■□□ 2.24
TSC22D4-206ENST00000496728 PTCH1Q13635 1447 aa29.04■■■□□ 2.24
TSC22D4-206ENST00000496728 YTHDC2Q9H6S0 1430 aaKnown RBP29.04■■■□□ 2.24
TSC22D4-206ENST00000496728 ROBO2Q9HCK4 1378 aa29.04■■■□□ 2.24
TSC22D4-206ENST00000496728 PRAG1Q86YV5 1406 aa29.03■■■□□ 2.24
TSC22D4-206ENST00000496728 SCAF1Q9H7N4 1312 aaKnown RBP29.02■■■□□ 2.24
TSC22D4-206ENST00000496728 PIP4K2BP78356 416 aa29.02■■■□□ 2.24
TSC22D4-206ENST00000496728 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
TSC22D4-206ENST00000496728 XIRP1Q702N8 1843 aaKnown RBP29■■■□□ 2.23
TSC22D4-206ENST00000496728 ATF3P18847 181 aa29■■■□□ 2.23
TSC22D4-206ENST00000496728 TECPR2O15040 1411 aa29■■■□□ 2.23
TSC22D4-206ENST00000496728 SIRT1Q96EB6 747 aa28.99■■■□□ 2.23
TSC22D4-206ENST00000496728 CADPS2Q86UW7 1296 aa28.98■■■□□ 2.23
TSC22D4-206ENST00000496728 WAPLQ7Z5K2 1190 aa28.96■■■□□ 2.23
TSC22D4-206ENST00000496728 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.22
TSC22D4-206ENST00000496728 ADGRB1O14514 1584 aa28.95■■■□□ 2.22
TSC22D4-206ENST00000496728 ADGRL3Q9HAR2 1447 aa28.94■■■□□ 2.22
TSC22D4-206ENST00000496728 NBPF1Q3BBV0 1214 aa28.93■■■□□ 2.22
TSC22D4-206ENST00000496728 SLAIN2Q9P270 581 aa28.93■■■□□ 2.22
TSC22D4-206ENST00000496728 FAM135BQ49AJ0 1406 aa28.93■■■□□ 2.22
TSC22D4-206ENST00000496728 POGKQ9P215 609 aa28.92■■■□□ 2.22
TSC22D4-206ENST00000496728 PRAM1Q96QH2 718 aa28.91■■■□□ 2.22
TSC22D4-206ENST00000496728 DCCP43146 1447 aa28.91■■■□□ 2.22
TSC22D4-206ENST00000496728 TIMELESSQ9UNS1 1208 aa28.89■■■□□ 2.22
TSC22D4-206ENST00000496728 PLEKHH1Q9ULM0 1364 aa28.88■■■□□ 2.21
TSC22D4-206ENST00000496728 NBPF8Q3BBV2 869 aa28.88■■■□□ 2.21
TSC22D4-206ENST00000496728 KNDC1Q76NI1 1749 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms