RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
CDHR3-214ENST00000496633 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
CDHR3-214ENST00000496633 LTKP29376 864 aa11.23□□□□□ -0.61
CDHR3-214ENST00000496633 BCANQ96GW7 911 aa11.23□□□□□ -0.61
CDHR3-214ENST00000496633 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-214ENST00000496633 PLEKHG1Q9ULL1 1385 aa11.23□□□□□ -0.61
CDHR3-214ENST00000496633 RIMS2Q9UQ26 1411 aa11.23□□□□□ -0.61
CDHR3-214ENST00000496633 KIF1BO60333 1816 aa11.22□□□□□ -0.61
CDHR3-214ENST00000496633 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
CDHR3-214ENST00000496633 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
CDHR3-214ENST00000496633 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
CDHR3-214ENST00000496633 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
CDHR3-214ENST00000496633 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
CDHR3-214ENST00000496633 DIP2AQ14689 1571 aa11.21□□□□□ -0.61
CDHR3-214ENST00000496633 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.61
CDHR3-214ENST00000496633 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
CDHR3-214ENST00000496633 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-214ENST00000496633 TOM1O60784 492 aa11.2□□□□□ -0.62
CDHR3-214ENST00000496633 TBX22Q9Y458 520 aa11.2□□□□□ -0.62
CDHR3-214ENST00000496633 RAB3GAP2Q9H2M9 1393 aa11.19□□□□□ -0.62
CDHR3-214ENST00000496633 KCNA6P17658 529 aa11.19□□□□□ -0.62
CDHR3-214ENST00000496633 MYO5BQ9ULV0 1848 aa11.18□□□□□ -0.62
CDHR3-214ENST00000496633 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
CDHR3-214ENST00000496633 CLTCL1P53675 1640 aa11.17□□□□□ -0.62
CDHR3-214ENST00000496633 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
CDHR3-214ENST00000496633 NCOA3Q9Y6Q9 1424 aa11.16□□□□□ -0.62
CDHR3-214ENST00000496633 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
CDHR3-214ENST00000496633 SLC26A8Q96RN1 970 aa11.15□□□□□ -0.62
CDHR3-214ENST00000496633 ANKRD30BQ9BXX2 1392 aa11.15□□□□□ -0.63
CDHR3-214ENST00000496633 NWD1Q149M9 1564 aa11.14□□□□□ -0.63
CDHR3-214ENST00000496633 SETBP1Q9Y6X0 1596 aa11.14□□□□□ -0.63
CDHR3-214ENST00000496633 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
CDHR3-214ENST00000496633 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
CDHR3-214ENST00000496633 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
CDHR3-214ENST00000496633 NEXMIFQ5QGS0 1516 aa11.12□□□□□ -0.63
CDHR3-214ENST00000496633 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
CDHR3-214ENST00000496633 MSH6P52701 1360 aa11.11□□□□□ -0.63
CDHR3-214ENST00000496633 STRCP1A6NGW2 1772 aa11.09□□□□□ -0.63
CDHR3-214ENST00000496633 TMEM94Q12767 1356 aa11.09□□□□□ -0.63
CDHR3-214ENST00000496633 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
CDHR3-214ENST00000496633 PPLO60437 1756 aa11.08□□□□□ -0.64
CDHR3-214ENST00000496633 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-214ENST00000496633 FOXD1Q16676 465 aa11.08□□□□□ -0.64
CDHR3-214ENST00000496633 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-214ENST00000496633 AMOTL2Q9Y2J4 779 aa11.08□□□□□ -0.64
CDHR3-214ENST00000496633 RGL3Q3MIN7 710 aa11.07□□□□□ -0.64
CDHR3-214ENST00000496633 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
CDHR3-214ENST00000496633 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
CDHR3-214ENST00000496633 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
CDHR3-214ENST00000496633 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
CDHR3-214ENST00000496633 ADRA2BP18089 450 aa11.06□□□□□ -0.64
CDHR3-214ENST00000496633 DCCP43146 1447 aa11.06□□□□□ -0.64
CDHR3-214ENST00000496633 ATF3P18847 181 aa11.05□□□□□ -0.64
CDHR3-214ENST00000496633 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
CDHR3-214ENST00000496633 LAMC1P11047 1609 aa11.05□□□□□ -0.64
CDHR3-214ENST00000496633 NRXN3Q9Y4C0 1643 aa11.05□□□□□ -0.64
CDHR3-214ENST00000496633 MYOM2P54296 1465 aa11.05□□□□□ -0.64
CDHR3-214ENST00000496633 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
CDHR3-214ENST00000496633 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
CDHR3-214ENST00000496633 FAM135BQ49AJ0 1406 aa11.04□□□□□ -0.64
CDHR3-214ENST00000496633 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
CDHR3-214ENST00000496633 ALKQ9UM73 1620 aa11.04□□□□□ -0.64
CDHR3-214ENST00000496633 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
CDHR3-214ENST00000496633 XIRP1Q702N8 1843 aaKnown RBP11.02□□□□□ -0.64
CDHR3-214ENST00000496633 PIK3C2GO75747 1445 aa11.02□□□□□ -0.64
CDHR3-214ENST00000496633 SLAIN2Q9P270 581 aa11.02□□□□□ -0.65
CDHR3-214ENST00000496633 METP08581 1390 aa11.02□□□□□ -0.65
CDHR3-214ENST00000496633 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
CDHR3-214ENST00000496633 DHX57Q6P158 1386 aaKnown RBP11.01□□□□□ -0.65
CDHR3-214ENST00000496633 NRXN1Q9ULB1 1477 aa11□□□□□ -0.65
CDHR3-214ENST00000496633 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
CDHR3-214ENST00000496633 ADGRF5Q8IZF2 1346 aa11□□□□□ -0.65
CDHR3-214ENST00000496633 ABCC11Q96J66 1382 aa11□□□□□ -0.65
CDHR3-214ENST00000496633 PTPRUQ92729 1446 aa11□□□□□ -0.65
CDHR3-214ENST00000496633 SETD1AO15047 1707 aaKnown RBP10.99□□□□□ -0.65
CDHR3-214ENST00000496633 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
CDHR3-214ENST00000496633 TECPR2O15040 1411 aa10.99□□□□□ -0.65
CDHR3-214ENST00000496633 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
CDHR3-214ENST00000496633 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
CDHR3-214ENST00000496633 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
CDHR3-214ENST00000496633 HSPA1LP34931 641 aa10.97□□□□□ -0.65
CDHR3-214ENST00000496633 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
CDHR3-214ENST00000496633 YTHDC2Q9H6S0 1430 aaKnown RBP10.96□□□□□ -0.65
CDHR3-214ENST00000496633 ROBO1Q9Y6N7 1651 aa10.95□□□□□ -0.66
CDHR3-214ENST00000496633 ROBO2Q9HCK4 1378 aa10.94□□□□□ -0.66
CDHR3-214ENST00000496633 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
CDHR3-214ENST00000496633 EIF3AQ14152 1382 aaKnown RBP10.93□□□□□ -0.66
CDHR3-214ENST00000496633 KIAA1210Q9ULL0 1709 aa10.93□□□□□ -0.66
CDHR3-214ENST00000496633 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
CDHR3-214ENST00000496633 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
CDHR3-214ENST00000496633 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
CDHR3-214ENST00000496633 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
CDHR3-214ENST00000496633 POGKQ9P215 609 aa10.92□□□□□ -0.66
CDHR3-214ENST00000496633 STK26Q9P289 416 aa10.92□□□□□ -0.66
CDHR3-214ENST00000496633 MST1RQ04912 1400 aa10.92□□□□□ -0.66
CDHR3-214ENST00000496633 AHDC1Q5TGY3 1603 aaPredicted RBP10.91□□□□□ -0.66
CDHR3-214ENST00000496633 TMEM132EQ6IEE7 984 aa10.91□□□□□ -0.66
CDHR3-214ENST00000496633 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
CDHR3-214ENST00000496633 JCADQ9P266 1359 aa10.9□□□□□ -0.66
CDHR3-214ENST00000496633 CLSPNQ9HAW4 1339 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms