RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 TRPM2O94759 1503 aa12.01□□□□□ -0.49
SMARCD3-215ENST00000496530 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
SMARCD3-215ENST00000496530 KIF1BO60333 1816 aa12□□□□□ -0.49
SMARCD3-215ENST00000496530 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
SMARCD3-215ENST00000496530 MYO5BQ9ULV0 1848 aa11.99□□□□□ -0.49
SMARCD3-215ENST00000496530 RIMS2Q9UQ26 1411 aa11.98□□□□□ -0.49
SMARCD3-215ENST00000496530 RAB3GAP2Q9H2M9 1393 aa11.98□□□□□ -0.49
SMARCD3-215ENST00000496530 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
SMARCD3-215ENST00000496530 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
SMARCD3-215ENST00000496530 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
SMARCD3-215ENST00000496530 CPS1P31327 1500 aa11.97□□□□□ -0.49
SMARCD3-215ENST00000496530 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
SMARCD3-215ENST00000496530 HRCP23327 699 aa11.97□□□□□ -0.49
SMARCD3-215ENST00000496530 LTKP29376 864 aa11.97□□□□□ -0.49
SMARCD3-215ENST00000496530 FBXO41Q8TF61 875 aa11.97□□□□□ -0.49
SMARCD3-215ENST00000496530 CLTCL1P53675 1640 aa11.96□□□□□ -0.5
SMARCD3-215ENST00000496530 CCDC144AA2RUR9 1427 aa11.95□□□□□ -0.5
SMARCD3-215ENST00000496530 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
SMARCD3-215ENST00000496530 LTBP4Q8N2S1 1624 aa11.95□□□□□ -0.5
SMARCD3-215ENST00000496530 PLEKHG1Q9ULL1 1385 aa11.94□□□□□ -0.5
SMARCD3-215ENST00000496530 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
SMARCD3-215ENST00000496530 DIP2AQ14689 1571 aa11.92□□□□□ -0.5
SMARCD3-215ENST00000496530 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
SMARCD3-215ENST00000496530 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-215ENST00000496530 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-215ENST00000496530 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
SMARCD3-215ENST00000496530 KCNA6P17658 529 aa11.89□□□□□ -0.51
SMARCD3-215ENST00000496530 TBX22Q9Y458 520 aa11.89□□□□□ -0.51
SMARCD3-215ENST00000496530 TOM1O60784 492 aa11.88□□□□□ -0.51
SMARCD3-215ENST00000496530 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
SMARCD3-215ENST00000496530 NEXMIFQ5QGS0 1516 aa11.87□□□□□ -0.51
SMARCD3-215ENST00000496530 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
SMARCD3-215ENST00000496530 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
SMARCD3-215ENST00000496530 RGL3Q3MIN7 710 aa11.86□□□□□ -0.51
SMARCD3-215ENST00000496530 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
SMARCD3-215ENST00000496530 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 PPLO60437 1756 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 NWD1Q149M9 1564 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 LRRC7Q96NW7 1537 aa11.85□□□□□ -0.51
SMARCD3-215ENST00000496530 ADAMTS13Q76LX8 1427 aa11.84□□□□□ -0.51
SMARCD3-215ENST00000496530 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
SMARCD3-215ENST00000496530 ADRA2BP18089 450 aa11.83□□□□□ -0.52
SMARCD3-215ENST00000496530 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
SMARCD3-215ENST00000496530 MSH6P52701 1360 aa11.81□□□□□ -0.52
SMARCD3-215ENST00000496530 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
SMARCD3-215ENST00000496530 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
SMARCD3-215ENST00000496530 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
SMARCD3-215ENST00000496530 NRXN3Q9Y4C0 1643 aa11.81□□□□□ -0.52
SMARCD3-215ENST00000496530 TMEM94Q12767 1356 aa11.8□□□□□ -0.52
SMARCD3-215ENST00000496530 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
SMARCD3-215ENST00000496530 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
SMARCD3-215ENST00000496530 STAC3Q96MF2 364 aa11.8□□□□□ -0.52
SMARCD3-215ENST00000496530 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
SMARCD3-215ENST00000496530 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
SMARCD3-215ENST00000496530 MYOM2P54296 1465 aa11.77□□□□□ -0.52
SMARCD3-215ENST00000496530 XIRP1Q702N8 1843 aaKnown RBP11.77□□□□□ -0.52
SMARCD3-215ENST00000496530 LAMC1P11047 1609 aa11.77□□□□□ -0.53
SMARCD3-215ENST00000496530 DHX57Q6P158 1386 aaKnown RBP11.77□□□□□ -0.53
SMARCD3-215ENST00000496530 XRN1Q8IZH2 1706 aaKnown RBP11.76□□□□□ -0.53
SMARCD3-215ENST00000496530 ADGRF5Q8IZF2 1346 aa11.76□□□□□ -0.53
SMARCD3-215ENST00000496530 METP08581 1390 aa11.76□□□□□ -0.53
SMARCD3-215ENST00000496530 ATF3P18847 181 aa11.75□□□□□ -0.53
SMARCD3-215ENST00000496530 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
SMARCD3-215ENST00000496530 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
SMARCD3-215ENST00000496530 PIK3C2GO75747 1445 aa11.75□□□□□ -0.53
SMARCD3-215ENST00000496530 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
SMARCD3-215ENST00000496530 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
SMARCD3-215ENST00000496530 C19orf44Q9H6X5 657 aa11.74□□□□□ -0.53
SMARCD3-215ENST00000496530 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
SMARCD3-215ENST00000496530 PTPRUQ92729 1446 aa11.74□□□□□ -0.53
SMARCD3-215ENST00000496530 PTCH1Q13635 1447 aa11.73□□□□□ -0.53
SMARCD3-215ENST00000496530 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
SMARCD3-215ENST00000496530 DCCP43146 1447 aa11.71□□□□□ -0.53
SMARCD3-215ENST00000496530 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.53
SMARCD3-215ENST00000496530 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
SMARCD3-215ENST00000496530 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
SMARCD3-215ENST00000496530 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
SMARCD3-215ENST00000496530 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
SMARCD3-215ENST00000496530 STK26Q9P289 416 aa11.7□□□□□ -0.54
SMARCD3-215ENST00000496530 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 ADGRL3Q9HAR2 1447 aa11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 YTHDC2Q9H6S0 1430 aaKnown RBP11.69□□□□□ -0.54
SMARCD3-215ENST00000496530 ROBO1Q9Y6N7 1651 aa11.68□□□□□ -0.54
SMARCD3-215ENST00000496530 TMEM132EQ6IEE7 984 aa11.68□□□□□ -0.54
SMARCD3-215ENST00000496530 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
SMARCD3-215ENST00000496530 HSPA1LP34931 641 aa11.67□□□□□ -0.54
SMARCD3-215ENST00000496530 TECPR2O15040 1411 aa11.67□□□□□ -0.54
SMARCD3-215ENST00000496530 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
SMARCD3-215ENST00000496530 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
SMARCD3-215ENST00000496530 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
SMARCD3-215ENST00000496530 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
SMARCD3-215ENST00000496530 POGKQ9P215 609 aa11.66□□□□□ -0.54
SMARCD3-215ENST00000496530 KIAA1210Q9ULL0 1709 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms