RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 ZFYVE9O95405 1425 aa31.68■■■□□ 2.66
PPM1F-208ENST00000496143 TRPM2O94759 1503 aa31.68■■■□□ 2.66
PPM1F-208ENST00000496143 MYO5BQ9ULV0 1848 aa31.66■■■□□ 2.66
PPM1F-208ENST00000496143 BCANQ96GW7 911 aa31.66■■■□□ 2.66
PPM1F-208ENST00000496143 PLEKHG1Q9ULL1 1385 aa31.63■■■□□ 2.65
PPM1F-208ENST00000496143 CLTCL1P53675 1640 aa31.58■■■□□ 2.65
PPM1F-208ENST00000496143 SLC26A8Q96RN1 970 aa31.58■■■□□ 2.65
PPM1F-208ENST00000496143 ZNF326Q5BKZ1 582 aaKnown RBP31.57■■■□□ 2.64
PPM1F-208ENST00000496143 MPHOSPH9Q99550 1183 aa31.57■■■□□ 2.64
PPM1F-208ENST00000496143 UBAP1LF5GYI3 381 aa31.55■■■□□ 2.64
PPM1F-208ENST00000496143 RAB3GAP2Q9H2M9 1393 aa31.55■■■□□ 2.64
PPM1F-208ENST00000496143 NUTM2DQ5VT03 806 aaPredicted RBP31.52■■■□□ 2.64
PPM1F-208ENST00000496143 STRCP1A6NGW2 1772 aa31.52■■■□□ 2.64
PPM1F-208ENST00000496143 LRRC7Q96NW7 1537 aa31.51■■■□□ 2.63
PPM1F-208ENST00000496143 KCNA6P17658 529 aa31.51■■■□□ 2.63
PPM1F-208ENST00000496143 KIF1BO60333 1816 aa31.51■■■□□ 2.63
PPM1F-208ENST00000496143 FOXD1Q16676 465 aa31.48■■■□□ 2.63
PPM1F-208ENST00000496143 SENP3Q9H4L4 574 aaPredicted RBP31.48■■■□□ 2.63
PPM1F-208ENST00000496143 TBX22Q9Y458 520 aa31.48■■■□□ 2.63
PPM1F-208ENST00000496143 DIP2AQ14689 1571 aa31.47■■■□□ 2.63
PPM1F-208ENST00000496143 TOM1O60784 492 aa31.47■■■□□ 2.63
PPM1F-208ENST00000496143 CCDC144AA2RUR9 1427 aa31.47■■■□□ 2.63
PPM1F-208ENST00000496143 HRCP23327 699 aa31.44■■■□□ 2.62
PPM1F-208ENST00000496143 NKTRP30414 1462 aaKnown RBP31.43■■■□□ 2.62
PPM1F-208ENST00000496143 NWD1Q149M9 1564 aa31.43■■■□□ 2.62
PPM1F-208ENST00000496143 ADAMTS13Q76LX8 1427 aa31.42■■■□□ 2.62
PPM1F-208ENST00000496143 NEXMIFQ5QGS0 1516 aa31.41■■■□□ 2.62
PPM1F-208ENST00000496143 RPGRIP1LQ68CZ1 1315 aa31.41■■■□□ 2.62
PPM1F-208ENST00000496143 PIK3R4Q99570 1358 aa31.41■■■□□ 2.62
PPM1F-208ENST00000496143 PROSER2Q86WR7 435 aaPredicted RBP31.39■■■□□ 2.62
PPM1F-208ENST00000496143 SETBP1Q9Y6X0 1596 aa31.38■■■□□ 2.61
PPM1F-208ENST00000496143 VGFO15240 615 aaPredicted RBP31.37■■■□□ 2.61
PPM1F-208ENST00000496143 TMEM94Q12767 1356 aa31.36■■■□□ 2.61
PPM1F-208ENST00000496143 SCAF1Q9H7N4 1312 aaKnown RBP31.35■■■□□ 2.61
PPM1F-208ENST00000496143 CHD2O14647 1828 aaKnown RBP31.34■■■□□ 2.61
PPM1F-208ENST00000496143 PIP4K2BP78356 416 aa31.32■■■□□ 2.6
PPM1F-208ENST00000496143 NRXN3Q9Y4C0 1643 aa31.3■■■□□ 2.6
PPM1F-208ENST00000496143 SPATA31E1Q6ZUB1 1445 aa31.28■■■□□ 2.6
PPM1F-208ENST00000496143 XIRP1Q702N8 1843 aaKnown RBP31.27■■■□□ 2.6
PPM1F-208ENST00000496143 RGL3Q3MIN7 710 aa31.25■■■□□ 2.59
PPM1F-208ENST00000496143 AMOTL2Q9Y2J4 779 aa31.25■■■□□ 2.59
PPM1F-208ENST00000496143 PPLO60437 1756 aa31.25■■■□□ 2.59
PPM1F-208ENST00000496143 NCOA3Q9Y6Q9 1424 aa31.24■■■□□ 2.59
PPM1F-208ENST00000496143 MSH6P52701 1360 aa31.24■■■□□ 2.59
PPM1F-208ENST00000496143 ANKRD30BQ9BXX2 1392 aa31.24■■■□□ 2.59
PPM1F-208ENST00000496143 ALKQ9UM73 1620 aa31.23■■■□□ 2.59
PPM1F-208ENST00000496143 RBM33Q96EV2 1170 aaKnown RBP31.22■■■□□ 2.59
PPM1F-208ENST00000496143 METP08581 1390 aa31.2■■■□□ 2.59
PPM1F-208ENST00000496143 PTPRUQ92729 1446 aa31.2■■■□□ 2.59
PPM1F-208ENST00000496143 C14orf37Q86TY3 774 aa31.19■■■□□ 2.58
PPM1F-208ENST00000496143 XRN1Q8IZH2 1706 aaKnown RBP31.16■■■□□ 2.58
PPM1F-208ENST00000496143 ADGRF5Q8IZF2 1346 aa31.13■■■□□ 2.57
PPM1F-208ENST00000496143 IFT172Q9UG01 1749 aa31.12■■■□□ 2.57
PPM1F-208ENST00000496143 HSPA1LP34931 641 aa31.12■■■□□ 2.57
PPM1F-208ENST00000496143 C19orf44Q9H6X5 657 aa31.1■■■□□ 2.57
PPM1F-208ENST00000496143 FAM135BQ49AJ0 1406 aa31.08■■■□□ 2.57
PPM1F-208ENST00000496143 SETD1AO15047 1707 aaKnown RBP31.08■■■□□ 2.57
PPM1F-208ENST00000496143 ATF3P18847 181 aa31.07■■■□□ 2.56
PPM1F-208ENST00000496143 CADPS2Q86UW7 1296 aa31.07■■■□□ 2.56
PPM1F-208ENST00000496143 PIK3C2GO75747 1445 aa31.06■■■□□ 2.56
PPM1F-208ENST00000496143 SLAIN2Q9P270 581 aa31.05■■■□□ 2.56
PPM1F-208ENST00000496143 MYOM2P54296 1465 aa31.05■■■□□ 2.56
PPM1F-208ENST00000496143 PTCH1Q13635 1447 aa31.05■■■□□ 2.56
PPM1F-208ENST00000496143 DCCP43146 1447 aa31.03■■■□□ 2.56
PPM1F-208ENST00000496143 PRAG1Q86YV5 1406 aa31.03■■■□□ 2.56
PPM1F-208ENST00000496143 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.01■■■□□ 2.55
PPM1F-208ENST00000496143 STAC3Q96MF2 364 aa30.99■■■□□ 2.55
PPM1F-208ENST00000496143 NRXN1Q9ULB1 1477 aa30.99■■■□□ 2.55
PPM1F-208ENST00000496143 ROBO1Q9Y6N7 1651 aa30.98■■■□□ 2.55
PPM1F-208ENST00000496143 TRIM26Q12899 539 aaPredicted RBP30.98■■■□□ 2.55
PPM1F-208ENST00000496143 ADGRL3Q9HAR2 1447 aa30.98■■■□□ 2.55
PPM1F-208ENST00000496143 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.55
PPM1F-208ENST00000496143 C14orf93Q9H972 538 aaKnown RBP30.95■■■□□ 2.55
PPM1F-208ENST00000496143 LAMC1P11047 1609 aa30.95■■■□□ 2.54
PPM1F-208ENST00000496143 LRPPRCP42704 1394 aaKnown RBP30.93■■■□□ 2.54
PPM1F-208ENST00000496143 DCAF11Q8TEB1 546 aa30.93■■■□□ 2.54
PPM1F-208ENST00000496143 TECPR2O15040 1411 aa30.9■■■□□ 2.54
PPM1F-208ENST00000496143 TMEM132EQ6IEE7 984 aa30.9■■■□□ 2.54
PPM1F-208ENST00000496143 STK26Q9P289 416 aa30.9■■■□□ 2.54
PPM1F-208ENST00000496143 ABCC11Q96J66 1382 aa30.9■■■□□ 2.54
PPM1F-208ENST00000496143 KDM2AQ9Y2K7 1162 aa30.89■■■□□ 2.54
PPM1F-208ENST00000496143 ASXL1Q8IXJ9 1541 aa30.88■■■□□ 2.53
PPM1F-208ENST00000496143 NALCNQ8IZF0 1738 aa30.88■■■□□ 2.53
PPM1F-208ENST00000496143 CFAP70Q5T0N1 1121 aa30.88■■■□□ 2.53
PPM1F-208ENST00000496143 DHX57Q6P158 1386 aaKnown RBP30.88■■■□□ 2.53
PPM1F-208ENST00000496143 DISP3Q9P2K9 1392 aa30.88■■■□□ 2.53
PPM1F-208ENST00000496143 YTHDC2Q9H6S0 1430 aaKnown RBP30.88■■■□□ 2.53
PPM1F-208ENST00000496143 KNDC1Q76NI1 1749 aa30.85■■■□□ 2.53
PPM1F-208ENST00000496143 MST1RQ04912 1400 aa30.85■■■□□ 2.53
PPM1F-208ENST00000496143 SIRT1Q96EB6 747 aa30.81■■■□□ 2.52
PPM1F-208ENST00000496143 BRINP3Q76B58 766 aa30.8■■■□□ 2.52
PPM1F-208ENST00000496143 PHLPP1O60346 1717 aa30.79■■■□□ 2.52
PPM1F-208ENST00000496143 WAPLQ7Z5K2 1190 aa30.77■■■□□ 2.52
PPM1F-208ENST00000496143 AHDC1Q5TGY3 1603 aaPredicted RBP30.76■■■□□ 2.52
PPM1F-208ENST00000496143 MED1Q15648 1581 aaPredicted RBP30.76■■■□□ 2.52
PPM1F-208ENST00000496143 CDC42BPGQ6DT37 1551 aa30.75■■■□□ 2.51
PPM1F-208ENST00000496143 C1orf167Q5SNV9 1468 aa30.75■■■□□ 2.51
PPM1F-208ENST00000496143 ADGRB1O14514 1584 aa30.73■■■□□ 2.51
PPM1F-208ENST00000496143 DLC1Q96QB1 1528 aa30.72■■■□□ 2.51
PPM1F-208ENST00000496143 JCADQ9P266 1359 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms