RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 NPHP4O75161 1426 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-233ENST00000495899 LTKP29376 864 aa18.46■□□□□ 0.55
MRPL55-233ENST00000495899 HDGFP51858 240 aaKnown RBP18.45■□□□□ 0.54
MRPL55-233ENST00000495899 SETD5Q9C0A6 1442 aa18.45■□□□□ 0.54
MRPL55-233ENST00000495899 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
MRPL55-233ENST00000495899 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
MRPL55-233ENST00000495899 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
MRPL55-233ENST00000495899 POLR1AO95602 1720 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-233ENST00000495899 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
MRPL55-233ENST00000495899 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
MRPL55-233ENST00000495899 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
MRPL55-233ENST00000495899 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
MRPL55-233ENST00000495899 HRCP23327 699 aa18.39■□□□□ 0.53
MRPL55-233ENST00000495899 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
MRPL55-233ENST00000495899 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
MRPL55-233ENST00000495899 ILDR1Q86SU0 546 aaPredicted RBP18.38■□□□□ 0.53
MRPL55-233ENST00000495899 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
MRPL55-233ENST00000495899 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-233ENST00000495899 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
MRPL55-233ENST00000495899 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
MRPL55-233ENST00000495899 ZFYVE9O95405 1425 aa18.36■□□□□ 0.53
MRPL55-233ENST00000495899 RIMS2Q9UQ26 1411 aa18.36■□□□□ 0.53
MRPL55-233ENST00000495899 TRPM2O94759 1503 aa18.35■□□□□ 0.53
MRPL55-233ENST00000495899 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
MRPL55-233ENST00000495899 PPP1R15AO75807 674 aaPredicted RBP18.34■□□□□ 0.53
MRPL55-233ENST00000495899 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
MRPL55-233ENST00000495899 CPS1P31327 1500 aa18.33■□□□□ 0.52
MRPL55-233ENST00000495899 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
MRPL55-233ENST00000495899 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
MRPL55-233ENST00000495899 BCANQ96GW7 911 aa18.31■□□□□ 0.52
MRPL55-233ENST00000495899 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
MRPL55-233ENST00000495899 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
MRPL55-233ENST00000495899 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
MRPL55-233ENST00000495899 CLTCL1P53675 1640 aa18.27■□□□□ 0.52
MRPL55-233ENST00000495899 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
MRPL55-233ENST00000495899 KCNA6P17658 529 aa18.26■□□□□ 0.51
MRPL55-233ENST00000495899 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
MRPL55-233ENST00000495899 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
MRPL55-233ENST00000495899 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
MRPL55-233ENST00000495899 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-233ENST00000495899 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-233ENST00000495899 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
MRPL55-233ENST00000495899 LRRC7Q96NW7 1537 aa18.21■□□□□ 0.51
MRPL55-233ENST00000495899 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
MRPL55-233ENST00000495899 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
MRPL55-233ENST00000495899 KIF1BO60333 1816 aa18.19■□□□□ 0.5
MRPL55-233ENST00000495899 TOM1O60784 492 aa18.19■□□□□ 0.5
MRPL55-233ENST00000495899 NEXMIFQ5QGS0 1516 aa18.18■□□□□ 0.5
MRPL55-233ENST00000495899 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
MRPL55-233ENST00000495899 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
MRPL55-233ENST00000495899 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
MRPL55-233ENST00000495899 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
MRPL55-233ENST00000495899 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-233ENST00000495899 STRCP1A6NGW2 1772 aa18.16■□□□□ 0.5
MRPL55-233ENST00000495899 SETBP1Q9Y6X0 1596 aa18.16■□□□□ 0.5
MRPL55-233ENST00000495899 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
MRPL55-233ENST00000495899 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
MRPL55-233ENST00000495899 NWD1Q149M9 1564 aa18.14■□□□□ 0.49
MRPL55-233ENST00000495899 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
MRPL55-233ENST00000495899 AMOTL2Q9Y2J4 779 aa18.12■□□□□ 0.49
MRPL55-233ENST00000495899 RNF39Q9H2S5 420 aa18.11■□□□□ 0.49
MRPL55-233ENST00000495899 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
MRPL55-233ENST00000495899 METP08581 1390 aa18.1■□□□□ 0.49
MRPL55-233ENST00000495899 NRXN3Q9Y4C0 1643 aa18.09■□□□□ 0.49
MRPL55-233ENST00000495899 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
MRPL55-233ENST00000495899 PTPRUQ92729 1446 aa18.08■□□□□ 0.49
MRPL55-233ENST00000495899 ADGRF5Q8IZF2 1346 aa18.07■□□□□ 0.48
MRPL55-233ENST00000495899 STAC3Q96MF2 364 aa18.07■□□□□ 0.48
MRPL55-233ENST00000495899 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
MRPL55-233ENST00000495899 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
MRPL55-233ENST00000495899 PPLO60437 1756 aa18.06■□□□□ 0.48
MRPL55-233ENST00000495899 MSH6P52701 1360 aa18.05■□□□□ 0.48
MRPL55-233ENST00000495899 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
MRPL55-233ENST00000495899 C19orf44Q9H6X5 657 aa18.03■□□□□ 0.48
MRPL55-233ENST00000495899 PIK3C2GO75747 1445 aa18.02■□□□□ 0.48
MRPL55-233ENST00000495899 C14orf37Q86TY3 774 aa18.02■□□□□ 0.48
MRPL55-233ENST00000495899 MYOM2P54296 1465 aa18.01■□□□□ 0.47
MRPL55-233ENST00000495899 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
MRPL55-233ENST00000495899 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-233ENST00000495899 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
MRPL55-233ENST00000495899 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
MRPL55-233ENST00000495899 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
MRPL55-233ENST00000495899 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
MRPL55-233ENST00000495899 IFT172Q9UG01 1749 aa17.99■□□□□ 0.47
MRPL55-233ENST00000495899 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
MRPL55-233ENST00000495899 DCAF11Q8TEB1 546 aa17.99■□□□□ 0.47
MRPL55-233ENST00000495899 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
MRPL55-233ENST00000495899 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
MRPL55-233ENST00000495899 ATF3P18847 181 aa17.98■□□□□ 0.47
MRPL55-233ENST00000495899 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
MRPL55-233ENST00000495899 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
MRPL55-233ENST00000495899 SETD1AO15047 1707 aaKnown RBP17.96■□□□□ 0.47
MRPL55-233ENST00000495899 HSPA1LP34931 641 aa17.96■□□□□ 0.47
MRPL55-233ENST00000495899 DCCP43146 1447 aa17.96■□□□□ 0.47
MRPL55-233ENST00000495899 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
MRPL55-233ENST00000495899 ABCC11Q96J66 1382 aa17.95■□□□□ 0.46
MRPL55-233ENST00000495899 ROBO2Q9HCK4 1378 aa17.95■□□□□ 0.46
MRPL55-233ENST00000495899 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
MRPL55-233ENST00000495899 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
MRPL55-233ENST00000495899 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms