RNA–Protein interactions for RNA: ENST00000495897.2

PPP3CB-206, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

TSL 2

Gene PPP3CB, Length 1,144 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-206ENST00000495897 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
PPP3CB-206ENST00000495897 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
PPP3CB-206ENST00000495897 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
PPP3CB-206ENST00000495897 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
PPP3CB-206ENST00000495897 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
PPP3CB-206ENST00000495897 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.45
PPP3CB-206ENST00000495897 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
PPP3CB-206ENST00000495897 PRSS12P56730 875 aa12.2□□□□□ -0.46
PPP3CB-206ENST00000495897 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
PPP3CB-206ENST00000495897 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
PPP3CB-206ENST00000495897 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
PPP3CB-206ENST00000495897 ARXQ96QS3 562 aa12.19□□□□□ -0.46
PPP3CB-206ENST00000495897 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
PPP3CB-206ENST00000495897 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
PPP3CB-206ENST00000495897 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
PPP3CB-206ENST00000495897 WDR62O43379 1518 aa12.16□□□□□ -0.46
PPP3CB-206ENST00000495897 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
PPP3CB-206ENST00000495897 TJAP1Q5JTD0 557 aa12.16□□□□□ -0.46
PPP3CB-206ENST00000495897 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
PPP3CB-206ENST00000495897 SMAPO00193 183 aa12.14□□□□□ -0.47
PPP3CB-206ENST00000495897 MLLT3P42568 568 aaPredicted RBP12.14□□□□□ -0.47
PPP3CB-206ENST00000495897 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
PPP3CB-206ENST00000495897 LCE2BO14633 110 aa12.13□□□□□ -0.47
PPP3CB-206ENST00000495897 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
PPP3CB-206ENST00000495897 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
PPP3CB-206ENST00000495897 TATDN2Q93075 761 aa12.12□□□□□ -0.47
PPP3CB-206ENST00000495897 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
PPP3CB-206ENST00000495897 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
PPP3CB-206ENST00000495897 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
PPP3CB-206ENST00000495897 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
PPP3CB-206ENST00000495897 MTRQ99707 1265 aa12.1□□□□□ -0.47
PPP3CB-206ENST00000495897 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
PPP3CB-206ENST00000495897 V9GY48 417 aaPredicted RBP12.1□□□□□ -0.47
PPP3CB-206ENST00000495897 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
PPP3CB-206ENST00000495897 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
PPP3CB-206ENST00000495897 NUDT18Q6ZVK8 323 aa12.07□□□□□ -0.48
PPP3CB-206ENST00000495897 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
PPP3CB-206ENST00000495897 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
PPP3CB-206ENST00000495897 PADI6Q6TGC4 694 aa12.06□□□□□ -0.48
PPP3CB-206ENST00000495897 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
PPP3CB-206ENST00000495897 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
PPP3CB-206ENST00000495897 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
PPP3CB-206ENST00000495897 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
PPP3CB-206ENST00000495897 RNF40O75150 1001 aa12.04□□□□□ -0.48
PPP3CB-206ENST00000495897 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
PPP3CB-206ENST00000495897 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
PPP3CB-206ENST00000495897 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
PPP3CB-206ENST00000495897 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
PPP3CB-206ENST00000495897 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
PPP3CB-206ENST00000495897 IFT140Q96RY7 1462 aa12.01□□□□□ -0.49
PPP3CB-206ENST00000495897 SEMA3EO15041 775 aa12□□□□□ -0.49
PPP3CB-206ENST00000495897 GGCXP38435 758 aa12□□□□□ -0.49
PPP3CB-206ENST00000495897 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
PPP3CB-206ENST00000495897 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
PPP3CB-206ENST00000495897 APLP1P51693 650 aa11.98□□□□□ -0.49
PPP3CB-206ENST00000495897 PTGDRQ13258 359 aa11.98□□□□□ -0.49
PPP3CB-206ENST00000495897 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.49
PPP3CB-206ENST00000495897 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
PPP3CB-206ENST00000495897 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
PPP3CB-206ENST00000495897 EYA1Q99502 592 aa11.96□□□□□ -0.49
PPP3CB-206ENST00000495897 CUX1P39880 1505 aa11.96□□□□□ -0.5
PPP3CB-206ENST00000495897 SOGA1O94964 1423 aa11.94□□□□□ -0.5
PPP3CB-206ENST00000495897 SWT1Q5T5J6 900 aaKnown RBP11.94□□□□□ -0.5
PPP3CB-206ENST00000495897 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
PPP3CB-206ENST00000495897 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
PPP3CB-206ENST00000495897 FGD5Q6ZNL6 1462 aa11.94□□□□□ -0.5
PPP3CB-206ENST00000495897 COPS2P61201 443 aa11.93□□□□□ -0.5
PPP3CB-206ENST00000495897 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
PPP3CB-206ENST00000495897 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
PPP3CB-206ENST00000495897 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
PPP3CB-206ENST00000495897 SLC4A3P48751 1232 aa11.91□□□□□ -0.5
PPP3CB-206ENST00000495897 C14orf37Q86TY3 774 aa11.91□□□□□ -0.5
PPP3CB-206ENST00000495897 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
PPP3CB-206ENST00000495897 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
PPP3CB-206ENST00000495897 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
PPP3CB-206ENST00000495897 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.51
PPP3CB-206ENST00000495897 FCHSD2O94868 740 aa11.87□□□□□ -0.51
PPP3CB-206ENST00000495897 ZNF775Q96BV0 537 aaPredicted RBP11.87□□□□□ -0.51
PPP3CB-206ENST00000495897 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
PPP3CB-206ENST00000495897 ZPR1O75312 459 aa11.86□□□□□ -0.51
PPP3CB-206ENST00000495897 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
PPP3CB-206ENST00000495897 RBM46Q8TBY0 533 aaKnown RBP11.86□□□□□ -0.51
PPP3CB-206ENST00000495897 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
PPP3CB-206ENST00000495897 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
PPP3CB-206ENST00000495897 DNAJB2P25686 324 aa11.84□□□□□ -0.51
PPP3CB-206ENST00000495897 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
PPP3CB-206ENST00000495897 SLC19A1P41440 591 aa11.83□□□□□ -0.52
PPP3CB-206ENST00000495897 SMYD5Q6GMV2 418 aa11.83□□□□□ -0.52
PPP3CB-206ENST00000495897 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
PPP3CB-206ENST00000495897 SYNJ1O43426 1573 aa11.82□□□□□ -0.52
PPP3CB-206ENST00000495897 ABCA10Q8WWZ4 1543 aa11.81□□□□□ -0.52
PPP3CB-206ENST00000495897 RCCD1A6NED2 376 aa11.81□□□□□ -0.52
PPP3CB-206ENST00000495897 TMEM134Q9H6X4 195 aa11.81□□□□□ -0.52
PPP3CB-206ENST00000495897 PCDHB3Q9Y5E6 796 aa11.81□□□□□ -0.52
PPP3CB-206ENST00000495897 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
PPP3CB-206ENST00000495897 PKDCCQ504Y2 493 aa11.8□□□□□ -0.52
PPP3CB-206ENST00000495897 GRIN2BQ13224 1484 aa11.79□□□□□ -0.52
PPP3CB-206ENST00000495897 HIC1Q14526 733 aa11.79□□□□□ -0.52
PPP3CB-206ENST00000495897 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
PPP3CB-206ENST00000495897 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms