RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 ALKQ9UM73 1620 aa30■■■□□ 2.39
SPOCK2-208ENST00000495888 ARHGAP23Q9P227 1491 aa29.99■■■□□ 2.39
SPOCK2-208ENST00000495888 STRCP1A6NGW2 1772 aa29.99■■■□□ 2.39
SPOCK2-208ENST00000495888 SLIT1O75093 1534 aa29.98■■■□□ 2.39
SPOCK2-208ENST00000495888 PIK3C2BO00750 1634 aa29.98■■■□□ 2.39
SPOCK2-208ENST00000495888 SLC52A1Q9NWF4 448 aa29.98■■■□□ 2.39
SPOCK2-208ENST00000495888 SCAF11Q99590 1463 aaKnown RBP29.96■■■□□ 2.39
SPOCK2-208ENST00000495888 CFAP65Q6ZU64 1925 aaKnown RBP29.96■■■□□ 2.39
SPOCK2-208ENST00000495888 SOCS7O14512 581 aa29.95■■■□□ 2.39
SPOCK2-208ENST00000495888 TOM1O60784 492 aa29.95■■■□□ 2.39
SPOCK2-208ENST00000495888 TONSLQ96HA7 1378 aa29.94■■■□□ 2.38
SPOCK2-208ENST00000495888 LRRC7Q96NW7 1537 aa29.93■■■□□ 2.38
SPOCK2-208ENST00000495888 SPATA31E1Q6ZUB1 1445 aa29.93■■■□□ 2.38
SPOCK2-208ENST00000495888 HSPA1LP34931 641 aa29.9■■■□□ 2.38
SPOCK2-208ENST00000495888 PIP4K2BP78356 416 aa29.9■■■□□ 2.38
SPOCK2-208ENST00000495888 KDM5AP29375 1690 aaKnown RBP29.88■■■□□ 2.37
SPOCK2-208ENST00000495888 LTKP29376 864 aa29.88■■■□□ 2.37
SPOCK2-208ENST00000495888 IDI1Q13907 227 aa29.88■■■□□ 2.37
SPOCK2-208ENST00000495888 SCAF1Q9H7N4 1312 aaKnown RBP29.88■■■□□ 2.37
SPOCK2-208ENST00000495888 ADGRB3O60242 1522 aa29.86■■■□□ 2.37
SPOCK2-208ENST00000495888 L3MBTL2Q969R5 705 aa29.85■■■□□ 2.37
SPOCK2-208ENST00000495888 KIF1BO60333 1816 aa29.85■■■□□ 2.37
SPOCK2-208ENST00000495888 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
SPOCK2-208ENST00000495888 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
SPOCK2-208ENST00000495888 MED1Q15648 1581 aaPredicted RBP29.82■■■□□ 2.36
SPOCK2-208ENST00000495888 TMEM131LA2VDJ0 1609 aa29.78■■■□□ 2.36
SPOCK2-208ENST00000495888 PPP1R15AO75807 674 aaPredicted RBP29.78■■■□□ 2.36
SPOCK2-208ENST00000495888 EID1Q9Y6B2 187 aa29.77■■■□□ 2.36
SPOCK2-208ENST00000495888 RGL3Q3MIN7 710 aa29.76■■■□□ 2.35
SPOCK2-208ENST00000495888 STAC3Q96MF2 364 aa29.76■■■□□ 2.35
SPOCK2-208ENST00000495888 XIRP1Q702N8 1843 aaKnown RBP29.75■■■□□ 2.35
SPOCK2-208ENST00000495888 RPGRIP1LQ68CZ1 1315 aa29.74■■■□□ 2.35
SPOCK2-208ENST00000495888 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
SPOCK2-208ENST00000495888 STAG3Q9UJ98 1225 aa29.7■■■□□ 2.35
SPOCK2-208ENST00000495888 DCAF11Q8TEB1 546 aa29.69■■■□□ 2.34
SPOCK2-208ENST00000495888 MYOM2P54296 1465 aa29.68■■■□□ 2.34
SPOCK2-208ENST00000495888 IFT172Q9UG01 1749 aa29.67■■■□□ 2.34
SPOCK2-208ENST00000495888 ZNF326Q5BKZ1 582 aaKnown RBP29.66■■■□□ 2.34
SPOCK2-208ENST00000495888 NEXMIFQ5QGS0 1516 aa29.65■■■□□ 2.34
SPOCK2-208ENST00000495888 MYO5BQ9ULV0 1848 aa29.64■■■□□ 2.33
SPOCK2-208ENST00000495888 ZFYVE9O95405 1425 aa29.63■■■□□ 2.33
SPOCK2-208ENST00000495888 PRAG1Q86YV5 1406 aa29.62■■■□□ 2.33
SPOCK2-208ENST00000495888 PPLO60437 1756 aa29.62■■■□□ 2.33
SPOCK2-208ENST00000495888 NWD1Q149M9 1564 aa29.62■■■□□ 2.33
SPOCK2-208ENST00000495888 NRXN1Q9ULB1 1477 aa29.61■■■□□ 2.33
SPOCK2-208ENST00000495888 KDM2AQ9Y2K7 1162 aa29.61■■■□□ 2.33
SPOCK2-208ENST00000495888 NBPF8Q3BBV2 869 aa29.59■■■□□ 2.33
SPOCK2-208ENST00000495888 KCNA6P17658 529 aa29.58■■■□□ 2.33
SPOCK2-208ENST00000495888 TMEM94Q12767 1356 aa29.58■■■□□ 2.33
SPOCK2-208ENST00000495888 NKTRP30414 1462 aaKnown RBP29.57■■■□□ 2.32
SPOCK2-208ENST00000495888 RIMS2Q9UQ26 1411 aa29.57■■■□□ 2.32
SPOCK2-208ENST00000495888 VGFO15240 615 aaPredicted RBP29.57■■■□□ 2.32
SPOCK2-208ENST00000495888 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
SPOCK2-208ENST00000495888 FAM135BQ49AJ0 1406 aa29.54■■■□□ 2.32
SPOCK2-208ENST00000495888 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.54■■■□□ 2.32
SPOCK2-208ENST00000495888 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
SPOCK2-208ENST00000495888 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
SPOCK2-208ENST00000495888 SENP3Q9H4L4 574 aaPredicted RBP29.52■■■□□ 2.32
SPOCK2-208ENST00000495888 RALGAPBQ86X10 1494 aa29.52■■■□□ 2.32
SPOCK2-208ENST00000495888 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
SPOCK2-208ENST00000495888 PIK3C2GO75747 1445 aa29.51■■■□□ 2.31
SPOCK2-208ENST00000495888 TRPM1Q7Z4N2 1603 aa29.47■■■□□ 2.31
SPOCK2-208ENST00000495888 KIAA1210Q9ULL0 1709 aa29.46■■■□□ 2.31
SPOCK2-208ENST00000495888 CHD2O14647 1828 aaKnown RBP29.46■■■□□ 2.31
SPOCK2-208ENST00000495888 PROSER2Q86WR7 435 aaPredicted RBP29.46■■■□□ 2.31
SPOCK2-208ENST00000495888 PHF23Q9BUL5 403 aaPredicted RBP29.46■■■□□ 2.31
SPOCK2-208ENST00000495888 ROBO1Q9Y6N7 1651 aa29.46■■■□□ 2.31
SPOCK2-208ENST00000495888 GPRASP1Q5JY77 1395 aa29.44■■■□□ 2.3
SPOCK2-208ENST00000495888 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
SPOCK2-208ENST00000495888 RBM33Q96EV2 1170 aaKnown RBP29.42■■■□□ 2.3
SPOCK2-208ENST00000495888 C14orf93Q9H972 538 aaKnown RBP29.42■■■□□ 2.3
SPOCK2-208ENST00000495888 SETBP1Q9Y6X0 1596 aa29.39■■■□□ 2.3
SPOCK2-208ENST00000495888 BCANQ96GW7 911 aa29.39■■■□□ 2.3
SPOCK2-208ENST00000495888 LAMC1P11047 1609 aa29.38■■■□□ 2.29
SPOCK2-208ENST00000495888 ADAMTS13Q76LX8 1427 aa29.38■■■□□ 2.29
SPOCK2-208ENST00000495888 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
SPOCK2-208ENST00000495888 ROCK2O75116 1388 aaKnown RBP29.38■■■□□ 2.29
SPOCK2-208ENST00000495888 MSH6P52701 1360 aa29.38■■■□□ 2.29
SPOCK2-208ENST00000495888 TBX22Q9Y458 520 aa29.37■■■□□ 2.29
SPOCK2-208ENST00000495888 NBPF1Q3BBV0 1214 aa29.36■■■□□ 2.29
SPOCK2-208ENST00000495888 CFAP70Q5T0N1 1121 aa29.36■■■□□ 2.29
SPOCK2-208ENST00000495888 NRXN3Q9Y4C0 1643 aa29.34■■■□□ 2.29
SPOCK2-208ENST00000495888 RGS17Q9UGC6 210 aaPredicted RBP29.33■■■□□ 2.29
SPOCK2-208ENST00000495888 NCOA3Q9Y6Q9 1424 aa29.33■■■□□ 2.29
SPOCK2-208ENST00000495888 ADGRB1O14514 1584 aa29.31■■■□□ 2.28
SPOCK2-208ENST00000495888 PIK3R4Q99570 1358 aa29.31■■■□□ 2.28
SPOCK2-208ENST00000495888 CARD11Q9BXL7 1154 aa29.31■■■□□ 2.28
SPOCK2-208ENST00000495888 SLAIN2Q9P270 581 aa29.28■■■□□ 2.28
SPOCK2-208ENST00000495888 SETD1AO15047 1707 aaKnown RBP29.28■■■□□ 2.28
SPOCK2-208ENST00000495888 PHLPP1O60346 1717 aa29.25■■■□□ 2.27
SPOCK2-208ENST00000495888 ASXL1Q8IXJ9 1541 aa29.25■■■□□ 2.27
SPOCK2-208ENST00000495888 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.27
SPOCK2-208ENST00000495888 USP47Q96K76 1375 aa29.25■■■□□ 2.27
SPOCK2-208ENST00000495888 COL16A1Q07092 1604 aaPredicted RBP29.23■■■□□ 2.27
SPOCK2-208ENST00000495888 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.22■■■□□ 2.27
SPOCK2-208ENST00000495888 PTPRUQ92729 1446 aa29.21■■■□□ 2.27
SPOCK2-208ENST00000495888 TMEM132EQ6IEE7 984 aa29.19■■■□□ 2.26
SPOCK2-208ENST00000495888 XRN1Q8IZH2 1706 aaKnown RBP29.19■■■□□ 2.26
SPOCK2-208ENST00000495888 METP08581 1390 aa29.18■■■□□ 2.26
SPOCK2-208ENST00000495888 HSPA5P11021 654 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms