RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 LTKP29376 864 aa29.48■■■□□ 2.31
LMO4-204ENST00000495705 HDGFP51858 240 aaKnown RBP29.48■■■□□ 2.31
LMO4-204ENST00000495705 ANKRD30BQ9BXX2 1392 aa29.45■■■□□ 2.31
LMO4-204ENST00000495705 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.45■■■□□ 2.31
LMO4-204ENST00000495705 ZNF326Q5BKZ1 582 aaKnown RBP29.43■■■□□ 2.3
LMO4-204ENST00000495705 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
LMO4-204ENST00000495705 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
LMO4-204ENST00000495705 PLEKHG1Q9ULL1 1385 aa29.39■■■□□ 2.29
LMO4-204ENST00000495705 SPATA31E1Q6ZUB1 1445 aa29.37■■■□□ 2.29
LMO4-204ENST00000495705 PCGF6Q9BYE7 350 aa29.36■■■□□ 2.29
LMO4-204ENST00000495705 RPGRIP1LQ68CZ1 1315 aa29.35■■■□□ 2.29
LMO4-204ENST00000495705 PPLO60437 1756 aa29.34■■■□□ 2.29
LMO4-204ENST00000495705 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
LMO4-204ENST00000495705 NUTM2DQ5VT03 806 aaPredicted RBP29.31■■■□□ 2.28
LMO4-204ENST00000495705 IFT172Q9UG01 1749 aa29.31■■■□□ 2.28
LMO4-204ENST00000495705 BCANQ96GW7 911 aa29.29■■■□□ 2.28
LMO4-204ENST00000495705 DIP2AQ14689 1571 aa29.29■■■□□ 2.28
LMO4-204ENST00000495705 LTBP4Q8N2S1 1624 aa29.27■■■□□ 2.28
LMO4-204ENST00000495705 SETBP1Q9Y6X0 1596 aa29.27■■■□□ 2.28
LMO4-204ENST00000495705 ZNF335Q9H4Z2 1342 aaPredicted RBP29.27■■■□□ 2.28
LMO4-204ENST00000495705 RGL3Q3MIN7 710 aa29.27■■■□□ 2.28
LMO4-204ENST00000495705 VGFO15240 615 aaPredicted RBP29.26■■■□□ 2.27
LMO4-204ENST00000495705 NRXN3Q9Y4C0 1643 aa29.24■■■□□ 2.27
LMO4-204ENST00000495705 ADAMTS13Q76LX8 1427 aa29.23■■■□□ 2.27
LMO4-204ENST00000495705 SLC26A8Q96RN1 970 aa29.23■■■□□ 2.27
LMO4-204ENST00000495705 CPS1P31327 1500 aa29.22■■■□□ 2.27
LMO4-204ENST00000495705 TBX22Q9Y458 520 aa29.2■■■□□ 2.26
LMO4-204ENST00000495705 SENP3Q9H4L4 574 aaPredicted RBP29.19■■■□□ 2.26
LMO4-204ENST00000495705 STRCP1A6NGW2 1772 aa29.18■■■□□ 2.26
LMO4-204ENST00000495705 MYOM2P54296 1465 aa29.17■■■□□ 2.26
LMO4-204ENST00000495705 NWD1Q149M9 1564 aa29.17■■■□□ 2.26
LMO4-204ENST00000495705 PIK3R4Q99570 1358 aa29.16■■■□□ 2.26
LMO4-204ENST00000495705 CHD2O14647 1828 aaKnown RBP29.16■■■□□ 2.26
LMO4-204ENST00000495705 IQSEC2Q5JU85 1478 aa29.13■■■□□ 2.25
LMO4-204ENST00000495705 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
LMO4-204ENST00000495705 KCNA6P17658 529 aa29.12■■■□□ 2.25
LMO4-204ENST00000495705 ADGRF5Q8IZF2 1346 aa29.12■■■□□ 2.25
LMO4-204ENST00000495705 SETD1AO15047 1707 aaKnown RBP29.11■■■□□ 2.25
LMO4-204ENST00000495705 NRXN1Q9ULB1 1477 aa29.11■■■□□ 2.25
LMO4-204ENST00000495705 STAC3Q96MF2 364 aa29.11■■■□□ 2.25
LMO4-204ENST00000495705 ALKQ9UM73 1620 aa29.11■■■□□ 2.25
LMO4-204ENST00000495705 PIK3C2GO75747 1445 aa29.11■■■□□ 2.25
LMO4-204ENST00000495705 NKTRP30414 1462 aaKnown RBP29.1■■■□□ 2.25
LMO4-204ENST00000495705 LAMC1P11047 1609 aa29.06■■■□□ 2.24
LMO4-204ENST00000495705 LRRC7Q96NW7 1537 aa29.06■■■□□ 2.24
LMO4-204ENST00000495705 DCAF11Q8TEB1 546 aa29.06■■■□□ 2.24
LMO4-204ENST00000495705 SIN3AQ96ST3 1273 aa29.05■■■□□ 2.24
LMO4-204ENST00000495705 METP08581 1390 aa29.04■■■□□ 2.24
LMO4-204ENST00000495705 XRN1Q8IZH2 1706 aaKnown RBP29.04■■■□□ 2.24
LMO4-204ENST00000495705 PTPRUQ92729 1446 aa29.02■■■□□ 2.24
LMO4-204ENST00000495705 NEUROD1Q13562 356 aa29.01■■■□□ 2.23
LMO4-204ENST00000495705 KDM2AQ9Y2K7 1162 aa29■■■□□ 2.23
LMO4-204ENST00000495705 XIRP1Q702N8 1843 aaKnown RBP28.99■■■□□ 2.23
LMO4-204ENST00000495705 AMOTL2Q9Y2J4 779 aa28.98■■■□□ 2.23
LMO4-204ENST00000495705 CLSPNQ9HAW4 1339 aa28.96■■■□□ 2.23
LMO4-204ENST00000495705 PROSER2Q86WR7 435 aaPredicted RBP28.96■■■□□ 2.23
LMO4-204ENST00000495705 C14orf93Q9H972 538 aaKnown RBP28.96■■■□□ 2.23
LMO4-204ENST00000495705 TMEM94Q12767 1356 aa28.95■■■□□ 2.22
LMO4-204ENST00000495705 PRAG1Q86YV5 1406 aa28.94■■■□□ 2.22
LMO4-204ENST00000495705 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
LMO4-204ENST00000495705 L3MBTL2Q969R5 705 aa28.93■■■□□ 2.22
LMO4-204ENST00000495705 PTCH1Q13635 1447 aa28.92■■■□□ 2.22
LMO4-204ENST00000495705 NCOA3Q9Y6Q9 1424 aa28.92■■■□□ 2.22
LMO4-204ENST00000495705 CFAP70Q5T0N1 1121 aa28.91■■■□□ 2.22
LMO4-204ENST00000495705 KNDC1Q76NI1 1749 aa28.91■■■□□ 2.22
LMO4-204ENST00000495705 KIAA1210Q9ULL0 1709 aa28.9■■■□□ 2.22
LMO4-204ENST00000495705 TONSLQ96HA7 1378 aa28.89■■■□□ 2.22
LMO4-204ENST00000495705 FBXO41Q8TF61 875 aa28.88■■■□□ 2.21
LMO4-204ENST00000495705 LRPPRCP42704 1394 aaKnown RBP28.88■■■□□ 2.21
LMO4-204ENST00000495705 TECPR2O15040 1411 aa28.86■■■□□ 2.21
LMO4-204ENST00000495705 YTHDC2Q9H6S0 1430 aaKnown RBP28.86■■■□□ 2.21
LMO4-204ENST00000495705 ADGRB1O14514 1584 aa28.86■■■□□ 2.21
LMO4-204ENST00000495705 TMEM132EQ6IEE7 984 aa28.85■■■□□ 2.21
LMO4-204ENST00000495705 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
LMO4-204ENST00000495705 ABCC11Q96J66 1382 aa28.84■■■□□ 2.21
LMO4-204ENST00000495705 RBM33Q96EV2 1170 aaKnown RBP28.83■■■□□ 2.21
LMO4-204ENST00000495705 MSH6P52701 1360 aa28.83■■■□□ 2.21
LMO4-204ENST00000495705 ROBO2Q9HCK4 1378 aa28.82■■■□□ 2.2
LMO4-204ENST00000495705 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
LMO4-204ENST00000495705 TOM1O60784 492 aa28.8■■■□□ 2.2
LMO4-204ENST00000495705 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
LMO4-204ENST00000495705 STK26Q9P289 416 aa28.8■■■□□ 2.2
LMO4-204ENST00000495705 DLC1Q96QB1 1528 aa28.78■■■□□ 2.2
LMO4-204ENST00000495705 TRPM1Q7Z4N2 1603 aa28.77■■■□□ 2.2
LMO4-204ENST00000495705 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
LMO4-204ENST00000495705 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
LMO4-204ENST00000495705 ADGRL3Q9HAR2 1447 aa28.77■■■□□ 2.2
LMO4-204ENST00000495705 DCCP43146 1447 aa28.76■■■□□ 2.19
LMO4-204ENST00000495705 FAM135BQ49AJ0 1406 aa28.76■■■□□ 2.19
LMO4-204ENST00000495705 SIRT1Q96EB6 747 aa28.75■■■□□ 2.19
LMO4-204ENST00000495705 C19orf44Q9H6X5 657 aa28.75■■■□□ 2.19
LMO4-204ENST00000495705 TIMELESSQ9UNS1 1208 aa28.73■■■□□ 2.19
LMO4-204ENST00000495705 CADPS2Q86UW7 1296 aa28.69■■■□□ 2.18
LMO4-204ENST00000495705 ARHGEF28Q8N1W1 1705 aaKnown RBP28.69■■■□□ 2.18
LMO4-204ENST00000495705 ATF3P18847 181 aa28.68■■■□□ 2.18
LMO4-204ENST00000495705 NBPF1Q3BBV0 1214 aa28.67■■■□□ 2.18
LMO4-204ENST00000495705 WAPLQ7Z5K2 1190 aa28.67■■■□□ 2.18
LMO4-204ENST00000495705 ILDR1Q86SU0 546 aaPredicted RBP28.67■■■□□ 2.18
LMO4-204ENST00000495705 TRAK1Q9UPV9 953 aa28.67■■■□□ 2.18
LMO4-204ENST00000495705 PLEKHH1Q9ULM0 1364 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms