RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 PLEKHG1Q9ULL1 1385 aa25.96■■□□□ 1.75
CTNS-207ENST00000495445 SLC26A8Q96RN1 970 aa25.96■■□□□ 1.75
CTNS-207ENST00000495445 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
CTNS-207ENST00000495445 KCNA6P17658 529 aa25.93■■□□□ 1.74
CTNS-207ENST00000495445 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
CTNS-207ENST00000495445 TOM1O60784 492 aa25.91■■□□□ 1.74
CTNS-207ENST00000495445 TBX22Q9Y458 520 aa25.9■■□□□ 1.74
CTNS-207ENST00000495445 TRPM2O94759 1503 aa25.89■■□□□ 1.74
CTNS-207ENST00000495445 PPP1R15AO75807 674 aaPredicted RBP25.89■■□□□ 1.74
CTNS-207ENST00000495445 NUTM2DQ5VT03 806 aaPredicted RBP25.87■■□□□ 1.73
CTNS-207ENST00000495445 BCANQ96GW7 911 aa25.87■■□□□ 1.73
CTNS-207ENST00000495445 ACIN1Q9UKV3 1341 aaKnown RBP25.86■■□□□ 1.73
CTNS-207ENST00000495445 CLTCL1P53675 1640 aa25.85■■□□□ 1.73
CTNS-207ENST00000495445 ALKQ9UM73 1620 aa25.85■■□□□ 1.73
CTNS-207ENST00000495445 ADAMTS13Q76LX8 1427 aa25.85■■□□□ 1.73
CTNS-207ENST00000495445 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
CTNS-207ENST00000495445 MPHOSPH9Q99550 1183 aa25.84■■□□□ 1.73
CTNS-207ENST00000495445 XIRP1Q702N8 1843 aaKnown RBP25.82■■□□□ 1.72
CTNS-207ENST00000495445 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
CTNS-207ENST00000495445 NWD1Q149M9 1564 aa25.81■■□□□ 1.72
CTNS-207ENST00000495445 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
CTNS-207ENST00000495445 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
CTNS-207ENST00000495445 PIP4K2BP78356 416 aa25.79■■□□□ 1.72
CTNS-207ENST00000495445 FOXD1Q16676 465 aa25.79■■□□□ 1.72
CTNS-207ENST00000495445 PROSER2Q86WR7 435 aaPredicted RBP25.79■■□□□ 1.72
CTNS-207ENST00000495445 TMEM94Q12767 1356 aa25.79■■□□□ 1.72
CTNS-207ENST00000495445 PIK3R4Q99570 1358 aa25.78■■□□□ 1.72
CTNS-207ENST00000495445 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
CTNS-207ENST00000495445 DIP2AQ14689 1571 aa25.77■■□□□ 1.72
CTNS-207ENST00000495445 KIF1BO60333 1816 aa25.77■■□□□ 1.72
CTNS-207ENST00000495445 NEXMIFQ5QGS0 1516 aa25.75■■□□□ 1.71
CTNS-207ENST00000495445 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
CTNS-207ENST00000495445 RAB3GAP2Q9H2M9 1393 aa25.73■■□□□ 1.71
CTNS-207ENST00000495445 RPGRIP1LQ68CZ1 1315 aa25.73■■□□□ 1.71
CTNS-207ENST00000495445 HSPA1LP34931 641 aa25.72■■□□□ 1.71
CTNS-207ENST00000495445 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
CTNS-207ENST00000495445 NRXN3Q9Y4C0 1643 aa25.72■■□□□ 1.71
CTNS-207ENST00000495445 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
CTNS-207ENST00000495445 HRCP23327 699 aa25.71■■□□□ 1.71
CTNS-207ENST00000495445 VGFO15240 615 aaPredicted RBP25.7■■□□□ 1.7
CTNS-207ENST00000495445 PTPRUQ92729 1446 aa25.7■■□□□ 1.7
CTNS-207ENST00000495445 NCOA3Q9Y6Q9 1424 aa25.7■■□□□ 1.7
CTNS-207ENST00000495445 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
CTNS-207ENST00000495445 CCDC144AA2RUR9 1427 aa25.65■■□□□ 1.7
CTNS-207ENST00000495445 METP08581 1390 aa25.65■■□□□ 1.7
CTNS-207ENST00000495445 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
CTNS-207ENST00000495445 SPATA31E1Q6ZUB1 1445 aa25.64■■□□□ 1.7
CTNS-207ENST00000495445 MSH6P52701 1360 aa25.61■■□□□ 1.69
CTNS-207ENST00000495445 PPLO60437 1756 aa25.59■■□□□ 1.69
CTNS-207ENST00000495445 C19orf44Q9H6X5 657 aa25.59■■□□□ 1.69
CTNS-207ENST00000495445 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
CTNS-207ENST00000495445 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
CTNS-207ENST00000495445 RGL3Q3MIN7 710 aa25.57■■□□□ 1.68
CTNS-207ENST00000495445 ADGRF5Q8IZF2 1346 aa25.54■■□□□ 1.68
CTNS-207ENST00000495445 ANKRD30BQ9BXX2 1392 aa25.54■■□□□ 1.68
CTNS-207ENST00000495445 SETD1AO15047 1707 aaKnown RBP25.54■■□□□ 1.68
CTNS-207ENST00000495445 DISP3Q9P2K9 1392 aa25.52■■□□□ 1.68
CTNS-207ENST00000495445 CADPS2Q86UW7 1296 aa25.51■■□□□ 1.67
CTNS-207ENST00000495445 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
CTNS-207ENST00000495445 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.5■■□□□ 1.67
CTNS-207ENST00000495445 IFT172Q9UG01 1749 aa25.49■■□□□ 1.67
CTNS-207ENST00000495445 ROBO1Q9Y6N7 1651 aa25.48■■□□□ 1.67
CTNS-207ENST00000495445 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
CTNS-207ENST00000495445 ATF3P18847 181 aa25.48■■□□□ 1.67
CTNS-207ENST00000495445 DCCP43146 1447 aa25.46■■□□□ 1.67
CTNS-207ENST00000495445 PTCH1Q13635 1447 aa25.44■■□□□ 1.66
CTNS-207ENST00000495445 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
CTNS-207ENST00000495445 PIK3C2GO75747 1445 aa25.43■■□□□ 1.66
CTNS-207ENST00000495445 NRXN1Q9ULB1 1477 aa25.41■■□□□ 1.66
CTNS-207ENST00000495445 ADGRL3Q9HAR2 1447 aa25.41■■□□□ 1.66
CTNS-207ENST00000495445 C14orf93Q9H972 538 aaKnown RBP25.4■■□□□ 1.66
CTNS-207ENST00000495445 ILDR2Q71H61 639 aa25.38■■□□□ 1.65
CTNS-207ENST00000495445 MED1Q15648 1581 aaPredicted RBP25.37■■□□□ 1.65
CTNS-207ENST00000495445 MYOM2P54296 1465 aa25.37■■□□□ 1.65
CTNS-207ENST00000495445 ABCC11Q96J66 1382 aa25.37■■□□□ 1.65
CTNS-207ENST00000495445 MST1RQ04912 1400 aa25.37■■□□□ 1.65
CTNS-207ENST00000495445 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
CTNS-207ENST00000495445 TMEM132EQ6IEE7 984 aa25.36■■□□□ 1.65
CTNS-207ENST00000495445 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
CTNS-207ENST00000495445 TECPR2O15040 1411 aa25.36■■□□□ 1.65
CTNS-207ENST00000495445 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
CTNS-207ENST00000495445 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
CTNS-207ENST00000495445 ASXL1Q8IXJ9 1541 aa25.33■■□□□ 1.65
CTNS-207ENST00000495445 CFAP70Q5T0N1 1121 aa25.32■■□□□ 1.64
CTNS-207ENST00000495445 SIRT1Q96EB6 747 aa25.32■■□□□ 1.64
CTNS-207ENST00000495445 PHLPP1O60346 1717 aa25.31■■□□□ 1.64
CTNS-207ENST00000495445 STK26Q9P289 416 aa25.3■■□□□ 1.64
CTNS-207ENST00000495445 AHDC1Q5TGY3 1603 aaPredicted RBP25.3■■□□□ 1.64
CTNS-207ENST00000495445 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
CTNS-207ENST00000495445 WAPLQ7Z5K2 1190 aa25.29■■□□□ 1.64
CTNS-207ENST00000495445 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
CTNS-207ENST00000495445 COL16A1Q07092 1604 aaPredicted RBP25.28■■□□□ 1.64
CTNS-207ENST00000495445 DCAF11Q8TEB1 546 aa25.28■■□□□ 1.64
CTNS-207ENST00000495445 JCADQ9P266 1359 aa25.27■■□□□ 1.64
CTNS-207ENST00000495445 C1orf167Q5SNV9 1468 aa25.27■■□□□ 1.64
CTNS-207ENST00000495445 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
CTNS-207ENST00000495445 KDM2AQ9Y2K7 1162 aa25.24■■□□□ 1.63
CTNS-207ENST00000495445 PLEKHH1Q9ULM0 1364 aa25.23■■□□□ 1.63
CTNS-207ENST00000495445 LAMC1P11047 1609 aa25.23■■□□□ 1.63
CTNS-207ENST00000495445 RGS17Q9UGC6 210 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms