RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 ITGAEP38570 1179 aa27.73■■■□□ 2.03
YIPF4-204ENST00000495355 NWD1Q149M9 1564 aa27.71■■■□□ 2.03
YIPF4-204ENST00000495355 SLC26A8Q96RN1 970 aa27.71■■■□□ 2.03
YIPF4-204ENST00000495355 RRBP1Q9P2E9 1410 aaKnown RBP27.68■■■□□ 2.02
YIPF4-204ENST00000495355 MED1Q15648 1581 aaPredicted RBP27.68■■■□□ 2.02
YIPF4-204ENST00000495355 RIMS2Q9UQ26 1411 aa27.67■■■□□ 2.02
YIPF4-204ENST00000495355 NUP155O75694 1391 aa27.67■■■□□ 2.02
YIPF4-204ENST00000495355 KCNA6P17658 529 aa27.65■■■□□ 2.02
YIPF4-204ENST00000495355 TMEM94Q12767 1356 aa27.64■■■□□ 2.02
YIPF4-204ENST00000495355 PLEKHG1Q9ULL1 1385 aa27.64■■■□□ 2.02
YIPF4-204ENST00000495355 NKTRP30414 1462 aaKnown RBP27.61■■■□□ 2.01
YIPF4-204ENST00000495355 CHD2O14647 1828 aaKnown RBP27.6■■■□□ 2.01
YIPF4-204ENST00000495355 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
YIPF4-204ENST00000495355 ADAMTS13Q76LX8 1427 aa27.58■■■□□ 2
YIPF4-204ENST00000495355 SPHKAPQ2M3C7 1700 aa27.57■■■□□ 2
YIPF4-204ENST00000495355 SOCS7O14512 581 aa27.56■■■□□ 2
YIPF4-204ENST00000495355 NAIPQ13075 1403 aa27.56■■■□□ 2
YIPF4-204ENST00000495355 CHGAP10645 457 aaKnown RBP27.55■■■□□ 2
YIPF4-204ENST00000495355 NUTM2DQ5VT03 806 aaPredicted RBP27.53■■■□□ 2
YIPF4-204ENST00000495355 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
YIPF4-204ENST00000495355 FAM135BQ49AJ0 1406 aa27.51■■□□□ 1.99
YIPF4-204ENST00000495355 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
YIPF4-204ENST00000495355 BCANQ96GW7 911 aa27.51■■□□□ 1.99
YIPF4-204ENST00000495355 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
YIPF4-204ENST00000495355 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
YIPF4-204ENST00000495355 DIP2AQ14689 1571 aa27.49■■□□□ 1.99
YIPF4-204ENST00000495355 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
YIPF4-204ENST00000495355 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.48■■□□□ 1.99
YIPF4-204ENST00000495355 HDGFP51858 240 aaKnown RBP27.47■■□□□ 1.99
YIPF4-204ENST00000495355 CLTCL1P53675 1640 aa27.47■■□□□ 1.99
YIPF4-204ENST00000495355 TRPM2O94759 1503 aa27.44■■□□□ 1.98
YIPF4-204ENST00000495355 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
YIPF4-204ENST00000495355 PTPRUQ92729 1446 aa27.43■■□□□ 1.98
YIPF4-204ENST00000495355 SETBP1Q9Y6X0 1596 aa27.41■■□□□ 1.98
YIPF4-204ENST00000495355 MSH6P52701 1360 aa27.41■■□□□ 1.98
YIPF4-204ENST00000495355 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
YIPF4-204ENST00000495355 NEXMIFQ5QGS0 1516 aa27.39■■□□□ 1.98
YIPF4-204ENST00000495355 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
YIPF4-204ENST00000495355 NCOA3Q9Y6Q9 1424 aa27.37■■□□□ 1.97
YIPF4-204ENST00000495355 FOXD1Q16676 465 aa27.36■■□□□ 1.97
YIPF4-204ENST00000495355 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.36■■□□□ 1.97
YIPF4-204ENST00000495355 SLAIN2Q9P270 581 aa27.33■■□□□ 1.97
YIPF4-204ENST00000495355 KIF1BO60333 1816 aa27.32■■□□□ 1.96
YIPF4-204ENST00000495355 AMOTL2Q9Y2J4 779 aa27.31■■□□□ 1.96
YIPF4-204ENST00000495355 RGS17Q9UGC6 210 aaPredicted RBP27.3■■□□□ 1.96
YIPF4-204ENST00000495355 METP08581 1390 aa27.3■■□□□ 1.96
YIPF4-204ENST00000495355 PHLPP1O60346 1717 aa27.3■■□□□ 1.96
YIPF4-204ENST00000495355 ZNF326Q5BKZ1 582 aaKnown RBP27.29■■□□□ 1.96
YIPF4-204ENST00000495355 COL16A1Q07092 1604 aaPredicted RBP27.28■■□□□ 1.96
YIPF4-204ENST00000495355 SETD1AO15047 1707 aaKnown RBP27.26■■□□□ 1.95
YIPF4-204ENST00000495355 TRIM52Q96A61 297 aa27.25■■□□□ 1.95
YIPF4-204ENST00000495355 C19orf44Q9H6X5 657 aa27.24■■□□□ 1.95
YIPF4-204ENST00000495355 AHDC1Q5TGY3 1603 aaPredicted RBP27.21■■□□□ 1.95
YIPF4-204ENST00000495355 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
YIPF4-204ENST00000495355 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
YIPF4-204ENST00000495355 DCCP43146 1447 aa27.19■■□□□ 1.94
YIPF4-204ENST00000495355 CADPS2Q86UW7 1296 aa27.19■■□□□ 1.94
YIPF4-204ENST00000495355 PPLO60437 1756 aa27.18■■□□□ 1.94
YIPF4-204ENST00000495355 NALCNQ8IZF0 1738 aa27.17■■□□□ 1.94
YIPF4-204ENST00000495355 JCADQ9P266 1359 aa27.16■■□□□ 1.94
YIPF4-204ENST00000495355 MST1RQ04912 1400 aa27.16■■□□□ 1.94
YIPF4-204ENST00000495355 ATF3P18847 181 aa27.15■■□□□ 1.94
YIPF4-204ENST00000495355 BRINP3Q76B58 766 aa27.13■■□□□ 1.93
YIPF4-204ENST00000495355 ADGRL3Q9HAR2 1447 aa27.13■■□□□ 1.93
YIPF4-204ENST00000495355 LRP6O75581 1613 aa27.12■■□□□ 1.93
YIPF4-204ENST00000495355 ASXL1Q8IXJ9 1541 aa27.11■■□□□ 1.93
YIPF4-204ENST00000495355 POTEAQ6S8J7 498 aa27.11■■□□□ 1.93
YIPF4-204ENST00000495355 PRAG1Q86YV5 1406 aa27.1■■□□□ 1.93
YIPF4-204ENST00000495355 SHPRHQ149N8 1683 aa27.1■■□□□ 1.93
YIPF4-204ENST00000495355 PTCH1Q13635 1447 aa27.09■■□□□ 1.93
YIPF4-204ENST00000495355 RPGRIP1LQ68CZ1 1315 aa27.09■■□□□ 1.93
YIPF4-204ENST00000495355 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
YIPF4-204ENST00000495355 NHSL1Q5SYE7 1610 aa27.08■■□□□ 1.93
YIPF4-204ENST00000495355 SPATA31E1Q6ZUB1 1445 aa27.08■■□□□ 1.93
YIPF4-204ENST00000495355 VGFO15240 615 aaPredicted RBP27.08■■□□□ 1.93
YIPF4-204ENST00000495355 IFT172Q9UG01 1749 aa27.07■■□□□ 1.92
YIPF4-204ENST00000495355 MPHOSPH9Q99550 1183 aa27.06■■□□□ 1.92
YIPF4-204ENST00000495355 CCDC144AA2RUR9 1427 aa27.03■■□□□ 1.92
YIPF4-204ENST00000495355 ADGRF5Q8IZF2 1346 aa27.02■■□□□ 1.92
YIPF4-204ENST00000495355 SPATA31A6Q5VVP1 1343 aa27■■□□□ 1.91
YIPF4-204ENST00000495355 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
YIPF4-204ENST00000495355 DDX17Q92841 729 aaKnown RBP26.98■■□□□ 1.91
YIPF4-204ENST00000495355 C1orf167Q5SNV9 1468 aa26.98■■□□□ 1.91
YIPF4-204ENST00000495355 LAMC1P11047 1609 aa26.97■■□□□ 1.91
YIPF4-204ENST00000495355 RGL3Q3MIN7 710 aa26.95■■□□□ 1.9
YIPF4-204ENST00000495355 PIK3C2GO75747 1445 aa26.92■■□□□ 1.9
YIPF4-204ENST00000495355 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
YIPF4-204ENST00000495355 TECPR2O15040 1411 aa26.9■■□□□ 1.9
YIPF4-204ENST00000495355 RAB3GAP2Q9H2M9 1393 aa26.9■■□□□ 1.9
YIPF4-204ENST00000495355 CDC42BPGQ6DT37 1551 aa26.89■■□□□ 1.9
YIPF4-204ENST00000495355 KNDC1Q76NI1 1749 aa26.89■■□□□ 1.9
YIPF4-204ENST00000495355 PNPLA6Q8IY17 1366 aa26.88■■□□□ 1.89
YIPF4-204ENST00000495355 ORAI2Q96SN7 254 aa26.88■■□□□ 1.89
YIPF4-204ENST00000495355 LRPPRCP42704 1394 aaKnown RBP26.86■■□□□ 1.89
YIPF4-204ENST00000495355 NRXN1Q9ULB1 1477 aa26.86■■□□□ 1.89
YIPF4-204ENST00000495355 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
YIPF4-204ENST00000495355 NUTM2BA6NNL0 878 aaPredicted RBP26.84■■□□□ 1.89
YIPF4-204ENST00000495355 NUTM2EB1AL46 878 aaPredicted RBP26.84■■□□□ 1.89
YIPF4-204ENST00000495355 MEX3CQ5U5Q3 659 aaKnown RBP26.84■■□□□ 1.89
YIPF4-204ENST00000495355 TMEM132EQ6IEE7 984 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms