RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-211ENST00000495176 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
CYTH3-211ENST00000495176 TMEM131LA2VDJ0 1609 aa27.19■■□□□ 1.94
CYTH3-211ENST00000495176 TOM1O60784 492 aa27.18■■□□□ 1.94
CYTH3-211ENST00000495176 HFM1A2PYH4 1435 aa27.17■■□□□ 1.94
CYTH3-211ENST00000495176 RIMS2Q9UQ26 1411 aa27.17■■□□□ 1.94
CYTH3-211ENST00000495176 SPHKAPQ2M3C7 1700 aa27.17■■□□□ 1.94
CYTH3-211ENST00000495176 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.14■■□□□ 1.94
CYTH3-211ENST00000495176 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
CYTH3-211ENST00000495176 SLC4A1APQ9BWU0 796 aaKnown RBP27.13■■□□□ 1.93
CYTH3-211ENST00000495176 LRRC7Q96NW7 1537 aa27.12■■□□□ 1.93
CYTH3-211ENST00000495176 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
CYTH3-211ENST00000495176 RBM33Q96EV2 1170 aaKnown RBP27.1■■□□□ 1.93
CYTH3-211ENST00000495176 KCNA6P17658 529 aa27.09■■□□□ 1.93
CYTH3-211ENST00000495176 PROSER2Q86WR7 435 aaPredicted RBP27.08■■□□□ 1.93
CYTH3-211ENST00000495176 PLEKHG1Q9ULL1 1385 aa27.07■■□□□ 1.92
CYTH3-211ENST00000495176 FOXD1Q16676 465 aa27.05■■□□□ 1.92
CYTH3-211ENST00000495176 KIF1BO60333 1816 aa27.04■■□□□ 1.92
CYTH3-211ENST00000495176 XIRP1Q702N8 1843 aaKnown RBP27.04■■□□□ 1.92
CYTH3-211ENST00000495176 HSPA1LP34931 641 aa27.02■■□□□ 1.92
CYTH3-211ENST00000495176 TMEM94Q12767 1356 aa27.01■■□□□ 1.91
CYTH3-211ENST00000495176 CHD2O14647 1828 aaKnown RBP27.01■■□□□ 1.91
CYTH3-211ENST00000495176 TBX22Q9Y458 520 aa27■■□□□ 1.91
CYTH3-211ENST00000495176 TRPM2O94759 1503 aa26.99■■□□□ 1.91
CYTH3-211ENST00000495176 CLTCL1P53675 1640 aa26.98■■□□□ 1.91
CYTH3-211ENST00000495176 MPHOSPH9Q99550 1183 aa26.96■■□□□ 1.91
CYTH3-211ENST00000495176 DISP3Q9P2K9 1392 aa26.95■■□□□ 1.9
CYTH3-211ENST00000495176 NKTRP30414 1462 aaKnown RBP26.94■■□□□ 1.9
CYTH3-211ENST00000495176 NWD1Q149M9 1564 aa26.94■■□□□ 1.9
CYTH3-211ENST00000495176 DIP2AQ14689 1571 aa26.93■■□□□ 1.9
CYTH3-211ENST00000495176 ADAMTS13Q76LX8 1427 aa26.93■■□□□ 1.9
CYTH3-211ENST00000495176 ALKQ9UM73 1620 aa26.93■■□□□ 1.9
CYTH3-211ENST00000495176 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
CYTH3-211ENST00000495176 C14orf37Q86TY3 774 aa26.92■■□□□ 1.9
CYTH3-211ENST00000495176 SETD5Q9C0A6 1442 aa26.91■■□□□ 1.9
CYTH3-211ENST00000495176 AMOTL2Q9Y2J4 779 aa26.89■■□□□ 1.9
CYTH3-211ENST00000495176 PIK3R4Q99570 1358 aa26.88■■□□□ 1.89
CYTH3-211ENST00000495176 MSH6P52701 1360 aa26.85■■□□□ 1.89
CYTH3-211ENST00000495176 RGL3Q3MIN7 710 aa26.85■■□□□ 1.89
CYTH3-211ENST00000495176 NEXMIFQ5QGS0 1516 aa26.84■■□□□ 1.89
CYTH3-211ENST00000495176 RAB3GAP2Q9H2M9 1393 aa26.84■■□□□ 1.89
CYTH3-211ENST00000495176 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
CYTH3-211ENST00000495176 SETBP1Q9Y6X0 1596 aa26.82■■□□□ 1.88
CYTH3-211ENST00000495176 NRXN3Q9Y4C0 1643 aa26.81■■□□□ 1.88
CYTH3-211ENST00000495176 CCDC144AA2RUR9 1427 aa26.81■■□□□ 1.88
CYTH3-211ENST00000495176 PTPRUQ92729 1446 aa26.81■■□□□ 1.88
CYTH3-211ENST00000495176 RPGRIP1LQ68CZ1 1315 aa26.8■■□□□ 1.88
CYTH3-211ENST00000495176 METP08581 1390 aa26.8■■□□□ 1.88
CYTH3-211ENST00000495176 SLAIN2Q9P270 581 aa26.78■■□□□ 1.88
CYTH3-211ENST00000495176 NCOA3Q9Y6Q9 1424 aa26.77■■□□□ 1.88
CYTH3-211ENST00000495176 FAM135BQ49AJ0 1406 aa26.76■■□□□ 1.87
CYTH3-211ENST00000495176 PPLO60437 1756 aa26.76■■□□□ 1.87
CYTH3-211ENST00000495176 ATF3P18847 181 aa26.74■■□□□ 1.87
CYTH3-211ENST00000495176 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
CYTH3-211ENST00000495176 ROBO1Q9Y6N7 1651 aa26.73■■□□□ 1.87
CYTH3-211ENST00000495176 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
CYTH3-211ENST00000495176 ILDR2Q71H61 639 aa26.7■■□□□ 1.86
CYTH3-211ENST00000495176 XRN1Q8IZH2 1706 aaKnown RBP26.7■■□□□ 1.86
CYTH3-211ENST00000495176 ADGRF5Q8IZF2 1346 aa26.69■■□□□ 1.86
CYTH3-211ENST00000495176 CADPS2Q86UW7 1296 aa26.69■■□□□ 1.86
CYTH3-211ENST00000495176 SPATA31E1Q6ZUB1 1445 aa26.65■■□□□ 1.86
CYTH3-211ENST00000495176 MED1Q15648 1581 aaPredicted RBP26.64■■□□□ 1.86
CYTH3-211ENST00000495176 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
CYTH3-211ENST00000495176 SETD1AO15047 1707 aaKnown RBP26.62■■□□□ 1.85
CYTH3-211ENST00000495176 IFT172Q9UG01 1749 aa26.62■■□□□ 1.85
CYTH3-211ENST00000495176 ANKRD30BQ9BXX2 1392 aa26.61■■□□□ 1.85
CYTH3-211ENST00000495176 HRCP23327 699 aa26.61■■□□□ 1.85
CYTH3-211ENST00000495176 STK26Q9P289 416 aa26.61■■□□□ 1.85
CYTH3-211ENST00000495176 PHLPP1O60346 1717 aa26.6■■□□□ 1.85
CYTH3-211ENST00000495176 TMEM132EQ6IEE7 984 aa26.58■■□□□ 1.85
CYTH3-211ENST00000495176 DCCP43146 1447 aa26.57■■□□□ 1.84
CYTH3-211ENST00000495176 ROBO2Q9HCK4 1378 aa26.57■■□□□ 1.84
CYTH3-211ENST00000495176 BRINP3Q76B58 766 aa26.54■■□□□ 1.84
CYTH3-211ENST00000495176 PTCH1Q13635 1447 aa26.52■■□□□ 1.84
CYTH3-211ENST00000495176 NALCNQ8IZF0 1738 aa26.52■■□□□ 1.84
CYTH3-211ENST00000495176 ADGRL3Q9HAR2 1447 aa26.52■■□□□ 1.84
CYTH3-211ENST00000495176 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
CYTH3-211ENST00000495176 CFAP70Q5T0N1 1121 aa26.49■■□□□ 1.83
CYTH3-211ENST00000495176 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
CYTH3-211ENST00000495176 MST1RQ04912 1400 aa26.48■■□□□ 1.83
CYTH3-211ENST00000495176 DCAF11Q8TEB1 546 aa26.47■■□□□ 1.83
CYTH3-211ENST00000495176 PIK3C2GO75747 1445 aa26.47■■□□□ 1.83
CYTH3-211ENST00000495176 DDX17Q92841 729 aaKnown RBP26.46■■□□□ 1.83
CYTH3-211ENST00000495176 C14orf93Q9H972 538 aaKnown RBP26.46■■□□□ 1.83
CYTH3-211ENST00000495176 PRAG1Q86YV5 1406 aa26.46■■□□□ 1.83
CYTH3-211ENST00000495176 JCADQ9P266 1359 aa26.46■■□□□ 1.83
CYTH3-211ENST00000495176 COL16A1Q07092 1604 aaPredicted RBP26.45■■□□□ 1.82
CYTH3-211ENST00000495176 AHDC1Q5TGY3 1603 aaPredicted RBP26.44■■□□□ 1.82
CYTH3-211ENST00000495176 LRPPRCP42704 1394 aaKnown RBP26.44■■□□□ 1.82
CYTH3-211ENST00000495176 NUTM2FA1L443 756 aa26.42■■□□□ 1.82
CYTH3-211ENST00000495176 MYOM2P54296 1465 aa26.42■■□□□ 1.82
CYTH3-211ENST00000495176 ASXL1Q8IXJ9 1541 aa26.41■■□□□ 1.82
CYTH3-211ENST00000495176 ORAI2Q96SN7 254 aa26.41■■□□□ 1.82
CYTH3-211ENST00000495176 LAMC1P11047 1609 aa26.4■■□□□ 1.82
CYTH3-211ENST00000495176 SOCS7O14512 581 aa26.4■■□□□ 1.82
CYTH3-211ENST00000495176 PLEKHH1Q9ULM0 1364 aa26.4■■□□□ 1.82
CYTH3-211ENST00000495176 YTHDC2Q9H6S0 1430 aaKnown RBP26.39■■□□□ 1.82
CYTH3-211ENST00000495176 KNDC1Q76NI1 1749 aa26.39■■□□□ 1.82
CYTH3-211ENST00000495176 ABCC11Q96J66 1382 aa26.39■■□□□ 1.82
CYTH3-211ENST00000495176 C1orf167Q5SNV9 1468 aa26.38■■□□□ 1.81
CYTH3-211ENST00000495176 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms