RNA–Protein interactions for RNA: ENST00000495052.5

LDHA-212, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-212ENST00000495052 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
LDHA-212ENST00000495052 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
LDHA-212ENST00000495052 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
LDHA-212ENST00000495052 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
LDHA-212ENST00000495052 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
LDHA-212ENST00000495052 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
LDHA-212ENST00000495052 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
LDHA-212ENST00000495052 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
LDHA-212ENST00000495052 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
LDHA-212ENST00000495052 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
LDHA-212ENST00000495052 PROSER2Q86WR7 435 aaPredicted RBP17.27■□□□□ 0.36
LDHA-212ENST00000495052 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
LDHA-212ENST00000495052 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
LDHA-212ENST00000495052 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
LDHA-212ENST00000495052 RGS17Q9UGC6 210 aaPredicted RBP17.24■□□□□ 0.35
LDHA-212ENST00000495052 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
LDHA-212ENST00000495052 NUP155O75694 1391 aa17.22■□□□□ 0.35
LDHA-212ENST00000495052 ITGAEP38570 1179 aa17.2■□□□□ 0.34
LDHA-212ENST00000495052 NUTM2DQ5VT03 806 aaPredicted RBP17.2■□□□□ 0.34
LDHA-212ENST00000495052 BCANQ96GW7 911 aa17.19■□□□□ 0.34
LDHA-212ENST00000495052 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
LDHA-212ENST00000495052 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
LDHA-212ENST00000495052 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
LDHA-212ENST00000495052 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
LDHA-212ENST00000495052 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
LDHA-212ENST00000495052 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
LDHA-212ENST00000495052 MSH6P52701 1360 aa17.16■□□□□ 0.34
LDHA-212ENST00000495052 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
LDHA-212ENST00000495052 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
LDHA-212ENST00000495052 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.16■□□□□ 0.34
LDHA-212ENST00000495052 DIP2AQ14689 1571 aa17.15■□□□□ 0.34
LDHA-212ENST00000495052 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
LDHA-212ENST00000495052 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
LDHA-212ENST00000495052 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
LDHA-212ENST00000495052 PHLPP1O60346 1717 aa17.13■□□□□ 0.33
LDHA-212ENST00000495052 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
LDHA-212ENST00000495052 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
LDHA-212ENST00000495052 NAIPQ13075 1403 aa17.12■□□□□ 0.33
LDHA-212ENST00000495052 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
LDHA-212ENST00000495052 TRPM2O94759 1503 aa17.11■□□□□ 0.33
LDHA-212ENST00000495052 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
LDHA-212ENST00000495052 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
LDHA-212ENST00000495052 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
LDHA-212ENST00000495052 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.32
LDHA-212ENST00000495052 NEXMIFQ5QGS0 1516 aa17.07■□□□□ 0.32
LDHA-212ENST00000495052 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
LDHA-212ENST00000495052 METP08581 1390 aa17.06■□□□□ 0.32
LDHA-212ENST00000495052 AHDC1Q5TGY3 1603 aaPredicted RBP17.05■□□□□ 0.32
LDHA-212ENST00000495052 JCADQ9P266 1359 aa17.04■□□□□ 0.32
LDHA-212ENST00000495052 LRP6O75581 1613 aa17.03■□□□□ 0.32
LDHA-212ENST00000495052 KIF1BO60333 1816 aa17.03■□□□□ 0.32
LDHA-212ENST00000495052 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
LDHA-212ENST00000495052 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
LDHA-212ENST00000495052 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
LDHA-212ENST00000495052 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
LDHA-212ENST00000495052 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
LDHA-212ENST00000495052 ATF3P18847 181 aa17■□□□□ 0.31
LDHA-212ENST00000495052 DCCP43146 1447 aa17■□□□□ 0.31
LDHA-212ENST00000495052 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
LDHA-212ENST00000495052 BRINP3Q76B58 766 aa17■□□□□ 0.31
LDHA-212ENST00000495052 MST1RQ04912 1400 aa16.99■□□□□ 0.31
LDHA-212ENST00000495052 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
LDHA-212ENST00000495052 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
LDHA-212ENST00000495052 NHSL1Q5SYE7 1610 aa16.97■□□□□ 0.31
LDHA-212ENST00000495052 PPLO60437 1756 aa16.96■□□□□ 0.31
LDHA-212ENST00000495052 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
LDHA-212ENST00000495052 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
LDHA-212ENST00000495052 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
LDHA-212ENST00000495052 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
LDHA-212ENST00000495052 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
LDHA-212ENST00000495052 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
LDHA-212ENST00000495052 FOXD1Q16676 465 aa16.91■□□□□ 0.3
LDHA-212ENST00000495052 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
LDHA-212ENST00000495052 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
LDHA-212ENST00000495052 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
LDHA-212ENST00000495052 LAMC1P11047 1609 aa16.89■□□□□ 0.29
LDHA-212ENST00000495052 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
LDHA-212ENST00000495052 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
LDHA-212ENST00000495052 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
LDHA-212ENST00000495052 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
LDHA-212ENST00000495052 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
LDHA-212ENST00000495052 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
LDHA-212ENST00000495052 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
LDHA-212ENST00000495052 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
LDHA-212ENST00000495052 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
LDHA-212ENST00000495052 PNPLA6Q8IY17 1366 aa16.85■□□□□ 0.29
LDHA-212ENST00000495052 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
LDHA-212ENST00000495052 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
LDHA-212ENST00000495052 ZNF772Q68DY9 489 aaPredicted RBP16.83■□□□□ 0.28
LDHA-212ENST00000495052 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.28
LDHA-212ENST00000495052 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
LDHA-212ENST00000495052 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
LDHA-212ENST00000495052 AFF2P51816 1311 aa16.8■□□□□ 0.28
LDHA-212ENST00000495052 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
LDHA-212ENST00000495052 TECPR2O15040 1411 aa16.79■□□□□ 0.28
LDHA-212ENST00000495052 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
LDHA-212ENST00000495052 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
LDHA-212ENST00000495052 UPF1Q92900 1129 aaKnown RBP eCLIP16.77■□□□□ 0.28
LDHA-212ENST00000495052 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
LDHA-212ENST00000495052 RXRBP28702 533 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms