RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 ZFYVE9O95405 1425 aa27.96■■■□□ 2.07
SNX8-209ENST00000494722 BCANQ96GW7 911 aa27.95■■■□□ 2.06
SNX8-209ENST00000494722 SLC26A8Q96RN1 970 aa27.95■■■□□ 2.06
SNX8-209ENST00000494722 RRBP1Q9P2E9 1410 aaKnown RBP27.93■■■□□ 2.06
SNX8-209ENST00000494722 RIMS2Q9UQ26 1411 aa27.93■■■□□ 2.06
SNX8-209ENST00000494722 PPP1R15AO75807 674 aaPredicted RBP27.93■■■□□ 2.06
SNX8-209ENST00000494722 ILDR2Q71H61 639 aa27.93■■■□□ 2.06
SNX8-209ENST00000494722 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.93■■■□□ 2.06
SNX8-209ENST00000494722 PLEKHG1Q9ULL1 1385 aa27.93■■■□□ 2.06
SNX8-209ENST00000494722 NKTRP30414 1462 aaKnown RBP27.91■■■□□ 2.06
SNX8-209ENST00000494722 NWD1Q149M9 1564 aa27.9■■■□□ 2.06
SNX8-209ENST00000494722 CHGAP10645 457 aaKnown RBP27.9■■■□□ 2.06
SNX8-209ENST00000494722 TMEM94Q12767 1356 aa27.88■■■□□ 2.05
SNX8-209ENST00000494722 PROSER2Q86WR7 435 aaPredicted RBP27.87■■■□□ 2.05
SNX8-209ENST00000494722 MED1Q15648 1581 aaPredicted RBP27.85■■■□□ 2.05
SNX8-209ENST00000494722 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
SNX8-209ENST00000494722 SOCS7O14512 581 aa27.84■■■□□ 2.05
SNX8-209ENST00000494722 SPHKAPQ2M3C7 1700 aa27.84■■■□□ 2.05
SNX8-209ENST00000494722 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
SNX8-209ENST00000494722 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
SNX8-209ENST00000494722 FAM135BQ49AJ0 1406 aa27.8■■■□□ 2.04
SNX8-209ENST00000494722 NAIPQ13075 1403 aa27.78■■■□□ 2.04
SNX8-209ENST00000494722 MSH6P52701 1360 aa27.77■■■□□ 2.04
SNX8-209ENST00000494722 PIK3R4Q99570 1358 aa27.77■■■□□ 2.04
SNX8-209ENST00000494722 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
SNX8-209ENST00000494722 ADAMTS13Q76LX8 1427 aa27.75■■■□□ 2.03
SNX8-209ENST00000494722 NCOA3Q9Y6Q9 1424 aa27.74■■■□□ 2.03
SNX8-209ENST00000494722 NUTM2DQ5VT03 806 aaPredicted RBP27.72■■■□□ 2.03
SNX8-209ENST00000494722 RBM33Q96EV2 1170 aaKnown RBP27.72■■■□□ 2.03
SNX8-209ENST00000494722 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
SNX8-209ENST00000494722 ROBO1Q9Y6N7 1651 aa27.71■■■□□ 2.03
SNX8-209ENST00000494722 TRPM2O94759 1503 aa27.71■■■□□ 2.03
SNX8-209ENST00000494722 PHF23Q9BUL5 403 aaPredicted RBP27.7■■■□□ 2.02
SNX8-209ENST00000494722 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
SNX8-209ENST00000494722 KIF1BO60333 1816 aa27.67■■■□□ 2.02
SNX8-209ENST00000494722 CLTCL1P53675 1640 aa27.66■■■□□ 2.02
SNX8-209ENST00000494722 SETBP1Q9Y6X0 1596 aa27.65■■■□□ 2.02
SNX8-209ENST00000494722 SLAIN2Q9P270 581 aa27.65■■■□□ 2.02
SNX8-209ENST00000494722 C14orf37Q86TY3 774 aa27.63■■■□□ 2.01
SNX8-209ENST00000494722 TRIM52Q96A61 297 aa27.63■■■□□ 2.01
SNX8-209ENST00000494722 NRXN3Q9Y4C0 1643 aa27.61■■■□□ 2.01
SNX8-209ENST00000494722 AMOTL2Q9Y2J4 779 aa27.61■■■□□ 2.01
SNX8-209ENST00000494722 CADPS2Q86UW7 1296 aa27.59■■■□□ 2.01
SNX8-209ENST00000494722 C19orf44Q9H6X5 657 aa27.59■■■□□ 2.01
SNX8-209ENST00000494722 NEXMIFQ5QGS0 1516 aa27.58■■■□□ 2.01
SNX8-209ENST00000494722 SLC4A1APQ9BWU0 796 aaKnown RBP27.57■■■□□ 2
SNX8-209ENST00000494722 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.57■■■□□ 2
SNX8-209ENST00000494722 PHLPP1O60346 1717 aa27.56■■■□□ 2
SNX8-209ENST00000494722 ATF3P18847 181 aa27.56■■■□□ 2
SNX8-209ENST00000494722 PTPRUQ92729 1446 aa27.56■■■□□ 2
SNX8-209ENST00000494722 XRN1Q8IZH2 1706 aaKnown RBP27.55■■■□□ 2
SNX8-209ENST00000494722 DCCP43146 1447 aa27.51■■□□□ 1.99
SNX8-209ENST00000494722 VGFO15240 615 aaPredicted RBP27.5■■□□□ 1.99
SNX8-209ENST00000494722 RPGRIP1LQ68CZ1 1315 aa27.49■■□□□ 1.99
SNX8-209ENST00000494722 METP08581 1390 aa27.48■■□□□ 1.99
SNX8-209ENST00000494722 JCADQ9P266 1359 aa27.48■■□□□ 1.99
SNX8-209ENST00000494722 ACIN1Q9UKV3 1341 aaKnown RBP27.47■■□□□ 1.99
SNX8-209ENST00000494722 COL16A1Q07092 1604 aaPredicted RBP27.45■■□□□ 1.98
SNX8-209ENST00000494722 AHDC1Q5TGY3 1603 aaPredicted RBP27.44■■□□□ 1.98
SNX8-209ENST00000494722 PPLO60437 1756 aa27.43■■□□□ 1.98
SNX8-209ENST00000494722 RGS17Q9UGC6 210 aaPredicted RBP27.4■■□□□ 1.98
SNX8-209ENST00000494722 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.98
SNX8-209ENST00000494722 CCDC144AA2RUR9 1427 aa27.39■■□□□ 1.97
SNX8-209ENST00000494722 ADGRL3Q9HAR2 1447 aa27.39■■□□□ 1.97
SNX8-209ENST00000494722 PTCH1Q13635 1447 aa27.37■■□□□ 1.97
SNX8-209ENST00000494722 BRINP3Q76B58 766 aa27.37■■□□□ 1.97
SNX8-209ENST00000494722 MPHOSPH9Q99550 1183 aa27.37■■□□□ 1.97
SNX8-209ENST00000494722 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
SNX8-209ENST00000494722 MST1RQ04912 1400 aa27.35■■□□□ 1.97
SNX8-209ENST00000494722 NALCNQ8IZF0 1738 aa27.35■■□□□ 1.97
SNX8-209ENST00000494722 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
SNX8-209ENST00000494722 SHPRHQ149N8 1683 aa27.34■■□□□ 1.97
SNX8-209ENST00000494722 FOXD1Q16676 465 aa27.34■■□□□ 1.97
SNX8-209ENST00000494722 ASXL1Q8IXJ9 1541 aa27.33■■□□□ 1.97
SNX8-209ENST00000494722 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
SNX8-209ENST00000494722 ANKRD30BQ9BXX2 1392 aa27.29■■□□□ 1.96
SNX8-209ENST00000494722 SETD5Q9C0A6 1442 aa27.29■■□□□ 1.96
SNX8-209ENST00000494722 SPATA31E1Q6ZUB1 1445 aa27.28■■□□□ 1.96
SNX8-209ENST00000494722 ROBO2Q9HCK4 1378 aa27.27■■□□□ 1.96
SNX8-209ENST00000494722 IFT172Q9UG01 1749 aa27.27■■□□□ 1.96
SNX8-209ENST00000494722 POTEAQ6S8J7 498 aa27.26■■□□□ 1.95
SNX8-209ENST00000494722 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
SNX8-209ENST00000494722 MEX3CQ5U5Q3 659 aaKnown RBP27.24■■□□□ 1.95
SNX8-209ENST00000494722 LRRC59Q96AG4 307 aaKnown RBP27.23■■□□□ 1.95
SNX8-209ENST00000494722 LRP6O75581 1613 aa27.23■■□□□ 1.95
SNX8-209ENST00000494722 ADGRF5Q8IZF2 1346 aa27.21■■□□□ 1.95
SNX8-209ENST00000494722 C1orf167Q5SNV9 1468 aa27.21■■□□□ 1.95
SNX8-209ENST00000494722 ZNF772Q68DY9 489 aaPredicted RBP27.19■■□□□ 1.94
SNX8-209ENST00000494722 LAMC1P11047 1609 aa27.18■■□□□ 1.94
SNX8-209ENST00000494722 TECPR2O15040 1411 aa27.16■■□□□ 1.94
SNX8-209ENST00000494722 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
SNX8-209ENST00000494722 RAB3GAP2Q9H2M9 1393 aa27.15■■□□□ 1.94
SNX8-209ENST00000494722 CDC42BPGQ6DT37 1551 aa27.14■■□□□ 1.94
SNX8-209ENST00000494722 LRPPRCP42704 1394 aaKnown RBP27.14■■□□□ 1.94
SNX8-209ENST00000494722 KNDC1Q76NI1 1749 aa27.14■■□□□ 1.94
SNX8-209ENST00000494722 NUTM2BA6NNL0 878 aaPredicted RBP27.13■■□□□ 1.93
SNX8-209ENST00000494722 NUTM2EB1AL46 878 aaPredicted RBP27.13■■□□□ 1.93
SNX8-209ENST00000494722 NUTM2AQ8IVF1 878 aaPredicted RBP27.13■■□□□ 1.93
SNX8-209ENST00000494722 ABCC11Q96J66 1382 aa27.12■■□□□ 1.93
SNX8-209ENST00000494722 PNPLA6Q8IY17 1366 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms