RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
CNNM3-205ENST00000494595 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
CNNM3-205ENST00000494595 KIF1BO60333 1816 aa20.45■□□□□ 0.86
CNNM3-205ENST00000494595 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
CNNM3-205ENST00000494595 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
CNNM3-205ENST00000494595 SCAF11Q99590 1463 aaKnown RBP20.43■□□□□ 0.86
CNNM3-205ENST00000494595 L3MBTL2Q969R5 705 aa20.43■□□□□ 0.86
CNNM3-205ENST00000494595 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
CNNM3-205ENST00000494595 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
CNNM3-205ENST00000494595 NCKAP5LQ9HCH0 1330 aa20.41■□□□□ 0.86
CNNM3-205ENST00000494595 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
CNNM3-205ENST00000494595 MED14O60244 1454 aa20.4■□□□□ 0.86
CNNM3-205ENST00000494595 NUTM2DQ5VT03 806 aaPredicted RBP20.4■□□□□ 0.86
CNNM3-205ENST00000494595 MYO5BQ9ULV0 1848 aa20.4■□□□□ 0.86
CNNM3-205ENST00000494595 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
CNNM3-205ENST00000494595 MYOM2P54296 1465 aa20.39■□□□□ 0.85
CNNM3-205ENST00000494595 DCAF11Q8TEB1 546 aa20.39■□□□□ 0.85
CNNM3-205ENST00000494595 NRXN1Q9ULB1 1477 aa20.38■□□□□ 0.85
CNNM3-205ENST00000494595 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
CNNM3-205ENST00000494595 PLEKHG1Q9ULL1 1385 aa20.38■□□□□ 0.85
CNNM3-205ENST00000494595 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
CNNM3-205ENST00000494595 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
CNNM3-205ENST00000494595 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
CNNM3-205ENST00000494595 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
CNNM3-205ENST00000494595 PPLO60437 1756 aa20.34■□□□□ 0.85
CNNM3-205ENST00000494595 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
CNNM3-205ENST00000494595 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
CNNM3-205ENST00000494595 ADAMTS13Q76LX8 1427 aa20.33■□□□□ 0.84
CNNM3-205ENST00000494595 STRCQ7RTU9 1775 aa20.33■□□□□ 0.84
CNNM3-205ENST00000494595 SETBP1Q9Y6X0 1596 aa20.31■□□□□ 0.84
CNNM3-205ENST00000494595 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
CNNM3-205ENST00000494595 TBX22Q9Y458 520 aa20.29■□□□□ 0.84
CNNM3-205ENST00000494595 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
CNNM3-205ENST00000494595 NBPF8Q3BBV2 869 aa20.28■□□□□ 0.84
CNNM3-205ENST00000494595 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
CNNM3-205ENST00000494595 NRXN3Q9Y4C0 1643 aa20.27■□□□□ 0.84
CNNM3-205ENST00000494595 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.84
CNNM3-205ENST00000494595 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
CNNM3-205ENST00000494595 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
CNNM3-205ENST00000494595 CFAP70Q5T0N1 1121 aa20.25■□□□□ 0.83
CNNM3-205ENST00000494595 BCANQ96GW7 911 aa20.25■□□□□ 0.83
CNNM3-205ENST00000494595 IQGAP1P46940 1657 aa20.25■□□□□ 0.83
CNNM3-205ENST00000494595 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
CNNM3-205ENST00000494595 METP08581 1390 aa20.22■□□□□ 0.83
CNNM3-205ENST00000494595 DIP2AQ14689 1571 aa20.22■□□□□ 0.83
CNNM3-205ENST00000494595 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
CNNM3-205ENST00000494595 ASXL1Q8IXJ9 1541 aa20.19■□□□□ 0.82
CNNM3-205ENST00000494595 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
CNNM3-205ENST00000494595 NBPF1Q3BBV0 1214 aa20.18■□□□□ 0.82
CNNM3-205ENST00000494595 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
CNNM3-205ENST00000494595 PTPRUQ92729 1446 aa20.18■□□□□ 0.82
CNNM3-205ENST00000494595 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
CNNM3-205ENST00000494595 KCNA6P17658 529 aa20.16■□□□□ 0.82
CNNM3-205ENST00000494595 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
CNNM3-205ENST00000494595 RALGAPBQ86X10 1494 aa20.16■□□□□ 0.82
CNNM3-205ENST00000494595 LAMC1P11047 1609 aa20.16■□□□□ 0.82
CNNM3-205ENST00000494595 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
CNNM3-205ENST00000494595 KIAA1210Q9ULL0 1709 aa20.13■□□□□ 0.81
CNNM3-205ENST00000494595 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
CNNM3-205ENST00000494595 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
CNNM3-205ENST00000494595 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
CNNM3-205ENST00000494595 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
CNNM3-205ENST00000494595 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
CNNM3-205ENST00000494595 TECPR2O15040 1411 aa20.11■□□□□ 0.81
CNNM3-205ENST00000494595 ROCK2O75116 1388 aaKnown RBP20.11■□□□□ 0.81
CNNM3-205ENST00000494595 NWD1Q149M9 1564 aa20.11■□□□□ 0.81
CNNM3-205ENST00000494595 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
CNNM3-205ENST00000494595 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
CNNM3-205ENST00000494595 XRN1Q8IZH2 1706 aaKnown RBP20.07■□□□□ 0.8
CNNM3-205ENST00000494595 STK26Q9P289 416 aa20.07■□□□□ 0.8
CNNM3-205ENST00000494595 PTCH1Q13635 1447 aa20.07■□□□□ 0.8
CNNM3-205ENST00000494595 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
CNNM3-205ENST00000494595 NKTRP30414 1462 aaKnown RBP20.06■□□□□ 0.8
CNNM3-205ENST00000494595 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
CNNM3-205ENST00000494595 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
CNNM3-205ENST00000494595 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
CNNM3-205ENST00000494595 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
CNNM3-205ENST00000494595 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
CNNM3-205ENST00000494595 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
CNNM3-205ENST00000494595 CPS1P31327 1500 aa20.03■□□□□ 0.8
CNNM3-205ENST00000494595 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
CNNM3-205ENST00000494595 PLEKHH1Q9ULM0 1364 aa20.01■□□□□ 0.79
CNNM3-205ENST00000494595 LRRC7Q96NW7 1537 aa20.01■□□□□ 0.79
CNNM3-205ENST00000494595 KNDC1Q76NI1 1749 aa20■□□□□ 0.79
CNNM3-205ENST00000494595 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
CNNM3-205ENST00000494595 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
CNNM3-205ENST00000494595 TMEM94Q12767 1356 aa19.99■□□□□ 0.79
CNNM3-205ENST00000494595 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
CNNM3-205ENST00000494595 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
CNNM3-205ENST00000494595 USP47Q96K76 1375 aa19.96■□□□□ 0.79
CNNM3-205ENST00000494595 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
CNNM3-205ENST00000494595 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
CNNM3-205ENST00000494595 EIF3AQ14152 1382 aaKnown RBP19.95■□□□□ 0.78
CNNM3-205ENST00000494595 POGKQ9P215 609 aa19.94■□□□□ 0.78
CNNM3-205ENST00000494595 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
CNNM3-205ENST00000494595 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
CNNM3-205ENST00000494595 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
CNNM3-205ENST00000494595 SAFB2Q14151 953 aaKnown RBP eCLIP19.92■□□□□ 0.78
CNNM3-205ENST00000494595 SBNO2Q9Y2G9 1366 aa19.92■□□□□ 0.78
CNNM3-205ENST00000494595 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms