RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 PIP4K2BP78356 416 aa21.79■■□□□ 1.08
PMP22-206ENST00000494511 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
PMP22-206ENST00000494511 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
PMP22-206ENST00000494511 HFM1A2PYH4 1435 aa21.75■■□□□ 1.07
PMP22-206ENST00000494511 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
PMP22-206ENST00000494511 BCANQ96GW7 911 aa21.75■■□□□ 1.07
PMP22-206ENST00000494511 SLC26A8Q96RN1 970 aa21.74■■□□□ 1.07
PMP22-206ENST00000494511 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
PMP22-206ENST00000494511 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
PMP22-206ENST00000494511 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
PMP22-206ENST00000494511 SPHKAPQ2M3C7 1700 aa21.71■■□□□ 1.07
PMP22-206ENST00000494511 ZFYVE9O95405 1425 aa21.71■■□□□ 1.07
PMP22-206ENST00000494511 LRRC7Q96NW7 1537 aa21.7■■□□□ 1.07
PMP22-206ENST00000494511 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
PMP22-206ENST00000494511 PLEKHG1Q9ULL1 1385 aa21.65■■□□□ 1.06
PMP22-206ENST00000494511 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.65■■□□□ 1.06
PMP22-206ENST00000494511 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.06
PMP22-206ENST00000494511 SLC4A1APQ9BWU0 796 aaKnown RBP21.64■■□□□ 1.05
PMP22-206ENST00000494511 KCNA6P17658 529 aa21.63■■□□□ 1.05
PMP22-206ENST00000494511 ZNF326Q5BKZ1 582 aaKnown RBP21.62■■□□□ 1.05
PMP22-206ENST00000494511 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
PMP22-206ENST00000494511 RBM33Q96EV2 1170 aaKnown RBP21.61■■□□□ 1.05
PMP22-206ENST00000494511 TRPM2O94759 1503 aa21.6■■□□□ 1.05
PMP22-206ENST00000494511 PROSER2Q86WR7 435 aaPredicted RBP21.59■■□□□ 1.05
PMP22-206ENST00000494511 FOXD1Q16676 465 aa21.58■■□□□ 1.05
PMP22-206ENST00000494511 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
PMP22-206ENST00000494511 TMEM94Q12767 1356 aa21.57■■□□□ 1.04
PMP22-206ENST00000494511 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
PMP22-206ENST00000494511 KIF1BO60333 1816 aa21.56■■□□□ 1.04
PMP22-206ENST00000494511 ADAMTS13Q76LX8 1427 aa21.55■■□□□ 1.04
PMP22-206ENST00000494511 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
PMP22-206ENST00000494511 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
PMP22-206ENST00000494511 NKTRP30414 1462 aaKnown RBP21.52■■□□□ 1.04
PMP22-206ENST00000494511 MPHOSPH9Q99550 1183 aa21.51■■□□□ 1.03
PMP22-206ENST00000494511 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
PMP22-206ENST00000494511 DIP2AQ14689 1571 aa21.5■■□□□ 1.03
PMP22-206ENST00000494511 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
PMP22-206ENST00000494511 NRXN3Q9Y4C0 1643 aa21.47■■□□□ 1.03
PMP22-206ENST00000494511 SETBP1Q9Y6X0 1596 aa21.45■■□□□ 1.02
PMP22-206ENST00000494511 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
PMP22-206ENST00000494511 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
PMP22-206ENST00000494511 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
PMP22-206ENST00000494511 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
PMP22-206ENST00000494511 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
PMP22-206ENST00000494511 MSH6P52701 1360 aa21.44■■□□□ 1.02
PMP22-206ENST00000494511 CCDC144AA2RUR9 1427 aa21.42■■□□□ 1.02
PMP22-206ENST00000494511 FAM135BQ49AJ0 1406 aa21.42■■□□□ 1.02
PMP22-206ENST00000494511 RGS17Q9UGC6 210 aaPredicted RBP21.42■■□□□ 1.02
PMP22-206ENST00000494511 ROBO1Q9Y6N7 1651 aa21.42■■□□□ 1.02
PMP22-206ENST00000494511 METP08581 1390 aa21.41■■□□□ 1.02
PMP22-206ENST00000494511 VGFO15240 615 aaPredicted RBP21.4■■□□□ 1.02
PMP22-206ENST00000494511 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
PMP22-206ENST00000494511 RPGRIP1LQ68CZ1 1315 aa21.39■■□□□ 1.01
PMP22-206ENST00000494511 PPLO60437 1756 aa21.38■■□□□ 1.01
PMP22-206ENST00000494511 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
PMP22-206ENST00000494511 XRN1Q8IZH2 1706 aaKnown RBP21.36■■□□□ 1.01
PMP22-206ENST00000494511 SLAIN2Q9P270 581 aa21.36■■□□□ 1.01
PMP22-206ENST00000494511 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
PMP22-206ENST00000494511 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.35■■□□□ 1.01
PMP22-206ENST00000494511 SPATA31E1Q6ZUB1 1445 aa21.33■■□□□ 1.01
PMP22-206ENST00000494511 C19orf44Q9H6X5 657 aa21.33■■□□□ 1.01
PMP22-206ENST00000494511 ATF3P18847 181 aa21.32■■□□□ 1
PMP22-206ENST00000494511 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
PMP22-206ENST00000494511 ADGRF5Q8IZF2 1346 aa21.31■■□□□ 1
PMP22-206ENST00000494511 PHLPP1O60346 1717 aa21.3■■□□□ 1
PMP22-206ENST00000494511 CADPS2Q86UW7 1296 aa21.3■■□□□ 1
PMP22-206ENST00000494511 IFT172Q9UG01 1749 aa21.28■■□□□ 1
PMP22-206ENST00000494511 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
PMP22-206ENST00000494511 POTEAQ6S8J7 498 aa21.26■□□□□ 0.99
PMP22-206ENST00000494511 HRCP23327 699 aa21.24■□□□□ 0.99
PMP22-206ENST00000494511 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
PMP22-206ENST00000494511 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
PMP22-206ENST00000494511 COL16A1Q07092 1604 aaPredicted RBP21.22■□□□□ 0.99
PMP22-206ENST00000494511 ADGRL3Q9HAR2 1447 aa21.22■□□□□ 0.99
PMP22-206ENST00000494511 DCCP43146 1447 aa21.21■□□□□ 0.99
PMP22-206ENST00000494511 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
PMP22-206ENST00000494511 STK26Q9P289 416 aa21.21■□□□□ 0.99
PMP22-206ENST00000494511 TMEM132EQ6IEE7 984 aa21.2■□□□□ 0.98
PMP22-206ENST00000494511 BRINP3Q76B58 766 aa21.19■□□□□ 0.98
PMP22-206ENST00000494511 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
PMP22-206ENST00000494511 JCADQ9P266 1359 aa21.18■□□□□ 0.98
PMP22-206ENST00000494511 MST1RQ04912 1400 aa21.18■□□□□ 0.98
PMP22-206ENST00000494511 ASXL1Q8IXJ9 1541 aa21.16■□□□□ 0.98
PMP22-206ENST00000494511 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
PMP22-206ENST00000494511 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.97
PMP22-206ENST00000494511 WAPLQ7Z5K2 1190 aa21.14■□□□□ 0.97
PMP22-206ENST00000494511 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
PMP22-206ENST00000494511 MYOM2P54296 1465 aa21.13■□□□□ 0.97
PMP22-206ENST00000494511 LRPPRCP42704 1394 aaKnown RBP21.13■□□□□ 0.97
PMP22-206ENST00000494511 SHPRHQ149N8 1683 aa21.13■□□□□ 0.97
PMP22-206ENST00000494511 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
PMP22-206ENST00000494511 C14orf93Q9H972 538 aaKnown RBP21.12■□□□□ 0.97
PMP22-206ENST00000494511 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
PMP22-206ENST00000494511 DCAF11Q8TEB1 546 aa21.11■□□□□ 0.97
PMP22-206ENST00000494511 DDX17Q92841 729 aaKnown RBP21.11■□□□□ 0.97
PMP22-206ENST00000494511 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
PMP22-206ENST00000494511 LRP6O75581 1613 aa21.11■□□□□ 0.97
PMP22-206ENST00000494511 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
PMP22-206ENST00000494511 ABCC11Q96J66 1382 aa21.1■□□□□ 0.97
PMP22-206ENST00000494511 TECPR2O15040 1411 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms