RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 TMEM131LA2VDJ0 1609 aa36.66■■■■□ 3.46
TTC3-224ENST00000494243 TMEM94Q12767 1356 aa36.66■■■■□ 3.46
TTC3-224ENST00000494243 ITGAEP38570 1179 aa36.65■■■■□ 3.46
TTC3-224ENST00000494243 SENP3Q9H4L4 574 aaPredicted RBP36.65■■■■□ 3.46
TTC3-224ENST00000494243 IQGAP3Q86VI3 1631 aa36.64■■■■□ 3.46
TTC3-224ENST00000494243 RIMS2Q9UQ26 1411 aa36.62■■■■□ 3.45
TTC3-224ENST00000494243 PROSER2Q86WR7 435 aaPredicted RBP36.6■■■■□ 3.45
TTC3-224ENST00000494243 BCANQ96GW7 911 aa36.6■■■■□ 3.45
TTC3-224ENST00000494243 PLEKHG1Q9ULL1 1385 aa36.6■■■■□ 3.45
TTC3-224ENST00000494243 NWD1Q149M9 1564 aa36.59■■■■□ 3.45
TTC3-224ENST00000494243 NUP155O75694 1391 aa36.59■■■■□ 3.45
TTC3-224ENST00000494243 RBM33Q96EV2 1170 aaKnown RBP36.59■■■■□ 3.45
TTC3-224ENST00000494243 HDGFP51858 240 aaKnown RBP36.57■■■■□ 3.44
TTC3-224ENST00000494243 NKTRP30414 1462 aaKnown RBP36.56■■■■□ 3.44
TTC3-224ENST00000494243 FAM135BQ49AJ0 1406 aa36.54■■■■□ 3.44
TTC3-224ENST00000494243 PPP1R15AO75807 674 aaPredicted RBP36.54■■■■□ 3.44
TTC3-224ENST00000494243 CHGAP10645 457 aaKnown RBP36.54■■■■□ 3.44
TTC3-224ENST00000494243 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.5■■■■□ 3.43
TTC3-224ENST00000494243 TBX22Q9Y458 520 aa36.49■■■■□ 3.43
TTC3-224ENST00000494243 CHD2O14647 1828 aaKnown RBP36.48■■■■□ 3.43
TTC3-224ENST00000494243 NUTM2DQ5VT03 806 aaPredicted RBP36.46■■■■□ 3.43
TTC3-224ENST00000494243 ADAMTS13Q76LX8 1427 aa36.44■■■■□ 3.42
TTC3-224ENST00000494243 PHF23Q9BUL5 403 aaPredicted RBP36.42■■■■□ 3.42
TTC3-224ENST00000494243 RRBP1Q9P2E9 1410 aaKnown RBP36.42■■■■□ 3.42
TTC3-224ENST00000494243 MSH6P52701 1360 aa36.4■■■■□ 3.42
TTC3-224ENST00000494243 ROBO1Q9Y6N7 1651 aa36.39■■■■□ 3.42
TTC3-224ENST00000494243 SLAIN2Q9P270 581 aa36.34■■■■□ 3.41
TTC3-224ENST00000494243 DIP2AQ14689 1571 aa36.34■■■■□ 3.41
TTC3-224ENST00000494243 PIK3R4Q99570 1358 aa36.32■■■■□ 3.4
TTC3-224ENST00000494243 SPHKAPQ2M3C7 1700 aa36.32■■■■□ 3.4
TTC3-224ENST00000494243 NCOA3Q9Y6Q9 1424 aa36.32■■■■□ 3.4
TTC3-224ENST00000494243 NAIPQ13075 1403 aa36.31■■■■□ 3.4
TTC3-224ENST00000494243 RGS17Q9UGC6 210 aaPredicted RBP36.28■■■■□ 3.4
TTC3-224ENST00000494243 PTPRUQ92729 1446 aa36.25■■■■□ 3.39
TTC3-224ENST00000494243 TRPM2O94759 1503 aa36.24■■■■□ 3.39
TTC3-224ENST00000494243 AMOTL2Q9Y2J4 779 aa36.23■■■■□ 3.39
TTC3-224ENST00000494243 NRXN3Q9Y4C0 1643 aa36.22■■■■□ 3.39
TTC3-224ENST00000494243 ZNF326Q5BKZ1 582 aaKnown RBP36.2■■■■□ 3.39
TTC3-224ENST00000494243 C14orf37Q86TY3 774 aa36.2■■■■□ 3.39
TTC3-224ENST00000494243 C19orf44Q9H6X5 657 aa36.2■■■■□ 3.39
TTC3-224ENST00000494243 CLTCL1P53675 1640 aa36.19■■■■□ 3.38
TTC3-224ENST00000494243 SETBP1Q9Y6X0 1596 aa36.19■■■■□ 3.38
TTC3-224ENST00000494243 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.18■■■■□ 3.38
TTC3-224ENST00000494243 PHLPP1O60346 1717 aa36.17■■■■□ 3.38
TTC3-224ENST00000494243 CADPS2Q86UW7 1296 aa36.15■■■■□ 3.38
TTC3-224ENST00000494243 HFM1A2PYH4 1435 aa36.14■■■■□ 3.38
TTC3-224ENST00000494243 ATF3P18847 181 aa36.12■■■■□ 3.37
TTC3-224ENST00000494243 NEXMIFQ5QGS0 1516 aa36.12■■■■□ 3.37
TTC3-224ENST00000494243 METP08581 1390 aa36.12■■■■□ 3.37
TTC3-224ENST00000494243 XRN1Q8IZH2 1706 aaKnown RBP36.11■■■■□ 3.37
TTC3-224ENST00000494243 JCADQ9P266 1359 aa36.09■■■■□ 3.37
TTC3-224ENST00000494243 COL16A1Q07092 1604 aaPredicted RBP36.08■■■■□ 3.37
TTC3-224ENST00000494243 TRIM52Q96A61 297 aa36.08■■■■□ 3.37
TTC3-224ENST00000494243 KIF1BO60333 1816 aa36.04■■■■□ 3.36
TTC3-224ENST00000494243 POTEAQ6S8J7 498 aa36.04■■■■□ 3.36
TTC3-224ENST00000494243 DCCP43146 1447 aa36.01■■■■□ 3.36
TTC3-224ENST00000494243 SLC4A1APQ9BWU0 796 aaKnown RBP36.01■■■■□ 3.36
TTC3-224ENST00000494243 AHDC1Q5TGY3 1603 aaPredicted RBP36.01■■■■□ 3.35
TTC3-224ENST00000494243 BRINP3Q76B58 766 aa35.99■■■■□ 3.35
TTC3-224ENST00000494243 VGFO15240 615 aaPredicted RBP35.93■■■■□ 3.34
TTC3-224ENST00000494243 MST1RQ04912 1400 aa35.92■■■■□ 3.34
TTC3-224ENST00000494243 SPATA31A6Q5VVP1 1343 aa35.91■■■■□ 3.34
TTC3-224ENST00000494243 LRP6O75581 1613 aa35.9■■■■□ 3.34
TTC3-224ENST00000494243 RPGRIP1LQ68CZ1 1315 aa35.9■■■■□ 3.34
TTC3-224ENST00000494243 ADGRL3Q9HAR2 1447 aa35.9■■■■□ 3.34
TTC3-224ENST00000494243 FOXD1Q16676 465 aa35.88■■■■□ 3.33
TTC3-224ENST00000494243 SETD1AO15047 1707 aaKnown RBP35.88■■■■□ 3.33
TTC3-224ENST00000494243 ASXL1Q8IXJ9 1541 aa35.88■■■■□ 3.33
TTC3-224ENST00000494243 SHPRHQ149N8 1683 aa35.87■■■■□ 3.33
TTC3-224ENST00000494243 NALCNQ8IZF0 1738 aa35.85■■■■□ 3.33
TTC3-224ENST00000494243 PPLO60437 1756 aa35.81■■■■□ 3.32
TTC3-224ENST00000494243 PTCH1Q13635 1447 aa35.81■■■■□ 3.32
TTC3-224ENST00000494243 ROBO2Q9HCK4 1378 aa35.8■■■■□ 3.32
TTC3-224ENST00000494243 NHSL1Q5SYE7 1610 aa35.79■■■■□ 3.32
TTC3-224ENST00000494243 SETD5Q9C0A6 1442 aa35.79■■■■□ 3.32
TTC3-224ENST00000494243 PRAG1Q86YV5 1406 aa35.78■■■■□ 3.32
TTC3-224ENST00000494243 MEX3CQ5U5Q3 659 aaKnown RBP35.76■■■■□ 3.32
TTC3-224ENST00000494243 MPHOSPH9Q99550 1183 aa35.76■■■■□ 3.32
TTC3-224ENST00000494243 DDX17Q92841 729 aaKnown RBP35.75■■■■□ 3.31
TTC3-224ENST00000494243 C1orf167Q5SNV9 1468 aa35.73■■■■□ 3.31
TTC3-224ENST00000494243 CCDC144AA2RUR9 1427 aa35.72■■■■□ 3.31
TTC3-224ENST00000494243 LRRC59Q96AG4 307 aaKnown RBP35.71■■■■□ 3.31
TTC3-224ENST00000494243 SPATA31E1Q6ZUB1 1445 aa35.71■■■■□ 3.31
TTC3-224ENST00000494243 NUTM2BA6NNL0 878 aaPredicted RBP35.7■■■■□ 3.31
TTC3-224ENST00000494243 NUTM2EB1AL46 878 aaPredicted RBP35.7■■■■□ 3.31
TTC3-224ENST00000494243 NUTM2AQ8IVF1 878 aaPredicted RBP35.7■■■■□ 3.31
TTC3-224ENST00000494243 ADGRF5Q8IZF2 1346 aa35.7■■■■□ 3.31
TTC3-224ENST00000494243 ZNF772Q68DY9 489 aaPredicted RBP35.69■■■■□ 3.3
TTC3-224ENST00000494243 RGL3Q3MIN7 710 aa35.68■■■■□ 3.3
TTC3-224ENST00000494243 ORAI2Q96SN7 254 aa35.64■■■■□ 3.3
TTC3-224ENST00000494243 PNPLA6Q8IY17 1366 aa35.63■■■■□ 3.29
TTC3-224ENST00000494243 LAMC1P11047 1609 aa35.62■■■■□ 3.29
TTC3-224ENST00000494243 ANKRD30BQ9BXX2 1392 aa35.62■■■■□ 3.29
TTC3-224ENST00000494243 IFT172Q9UG01 1749 aa35.6■■■■□ 3.29
TTC3-224ENST00000494243 SOS2Q07890 1332 aaPredicted RBP35.57■■■■□ 3.28
TTC3-224ENST00000494243 AFF2P51816 1311 aa35.56■■■■□ 3.28
TTC3-224ENST00000494243 TECPR2O15040 1411 aa35.54■■■■□ 3.28
TTC3-224ENST00000494243 ACIN1Q9UKV3 1341 aaKnown RBP35.54■■■■□ 3.28
TTC3-224ENST00000494243 LRPPRCP42704 1394 aaKnown RBP35.53■■■■□ 3.28
TTC3-224ENST00000494243 STK26Q9P289 416 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms