RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	RIMS2	Q9UQ26	1411 aa		28.35	■■■□□ 2.13
ABCA2-222	ENST00000494046	ZFYVE9	O95405	1425 aa		28.35	■■■□□ 2.13
ABCA2-222	ENST00000494046	PPP1R15A	O75807	674 aa	Predicted RBP	28.34	■■■□□ 2.13
ABCA2-222	ENST00000494046	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.33	■■■□□ 2.13
ABCA2-222	ENST00000494046	ALK	Q9UM73	1620 aa		28.3	■■■□□ 2.12
ABCA2-222	ENST00000494046	HDGF	P51858	240 aa	Known RBP	28.29	■■■□□ 2.12
ABCA2-222	ENST00000494046	KCNA6	P17658	529 aa		28.29	■■■□□ 2.12
ABCA2-222	ENST00000494046	HSPA1L	P34931	641 aa		28.29	■■■□□ 2.12
ABCA2-222	ENST00000494046	DISP3	Q9P2K9	1392 aa		28.28	■■■□□ 2.12
ABCA2-222	ENST00000494046	TRIM52	Q96A61	297 aa		28.28	■■■□□ 2.12
ABCA2-222	ENST00000494046	PLEKHG1	Q9ULL1	1385 aa		28.27	■■■□□ 2.12
ABCA2-222	ENST00000494046	HFM1	A2PYH4	1435 aa		28.27	■■■□□ 2.12
ABCA2-222	ENST00000494046	RBM33	Q96EV2	1170 aa	Known RBP	28.26	■■■□□ 2.11
ABCA2-222	ENST00000494046	PCGF6	Q9BYE7	350 aa		28.26	■■■□□ 2.11
ABCA2-222	ENST00000494046	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.25	■■■□□ 2.11
ABCA2-222	ENST00000494046	SPHKAP	Q2M3C7	1700 aa		28.23	■■■□□ 2.11
ABCA2-222	ENST00000494046	PROSER2	Q86WR7	435 aa	Predicted RBP	28.22	■■■□□ 2.11
ABCA2-222	ENST00000494046	TMEM94	Q12767	1356 aa		28.22	■■■□□ 2.11
ABCA2-222	ENST00000494046	XIRP1	Q702N8	1843 aa	Known RBP	28.22	■■■□□ 2.11
ABCA2-222	ENST00000494046	ZNF326	Q5BKZ1	582 aa	Known RBP	28.18	■■■□□ 2.1
ABCA2-222	ENST00000494046	TRIM26	Q12899	539 aa	Predicted RBP	28.17	■■■□□ 2.1
ABCA2-222	ENST00000494046	TBX22	Q9Y458	520 aa		28.17	■■■□□ 2.1
ABCA2-222	ENST00000494046	NWD1	Q149M9	1564 aa		28.16	■■■□□ 2.1
ABCA2-222	ENST00000494046	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.15	■■■□□ 2.1
ABCA2-222	ENST00000494046	ADAMTS13	Q76LX8	1427 aa		28.15	■■■□□ 2.1
ABCA2-222	ENST00000494046	CLTCL1	P53675	1640 aa		28.14	■■■□□ 2.1
ABCA2-222	ENST00000494046	NKTR	P30414	1462 aa	Known RBP	28.13	■■■□□ 2.09
ABCA2-222	ENST00000494046	TRPM2	O94759	1503 aa		28.13	■■■□□ 2.09
ABCA2-222	ENST00000494046	CHD2	O14647	1828 aa	Known RBP	28.1	■■■□□ 2.09
ABCA2-222	ENST00000494046	ILDR2	Q71H61	639 aa		28.1	■■■□□ 2.09
ABCA2-222	ENST00000494046	FOXD1	Q16676	465 aa		28.09	■■■□□ 2.09
ABCA2-222	ENST00000494046	DIP2A	Q14689	1571 aa		28.06	■■■□□ 2.08
ABCA2-222	ENST00000494046	MSH6	P52701	1360 aa		28.04	■■■□□ 2.08
ABCA2-222	ENST00000494046	AMOTL2	Q9Y2J4	779 aa		28.02	■■■□□ 2.08
ABCA2-222	ENST00000494046	PIK3R4	Q99570	1358 aa		28.02	■■■□□ 2.08
ABCA2-222	ENST00000494046	PTPRU	Q92729	1446 aa		28.02	■■■□□ 2.08
ABCA2-222	ENST00000494046	NEXMIF	Q5QGS0	1516 aa		28.01	■■■□□ 2.07
ABCA2-222	ENST00000494046	C14orf37	Q86TY3	774 aa		28.01	■■■□□ 2.07
ABCA2-222	ENST00000494046	NRXN3	Q9Y4C0	1643 aa		28.01	■■■□□ 2.07
ABCA2-222	ENST00000494046	KIF1B	O60333	1816 aa		28.01	■■■□□ 2.07
ABCA2-222	ENST00000494046	FAM135B	Q49AJ0	1406 aa		28	■■■□□ 2.07
ABCA2-222	ENST00000494046	SETBP1	Q9Y6X0	1596 aa		27.99	■■■□□ 2.07
ABCA2-222	ENST00000494046	MED1	Q15648	1581 aa	Predicted RBP	27.97	■■■□□ 2.07
ABCA2-222	ENST00000494046	MPHOSPH9	Q99550	1183 aa		27.97	■■■□□ 2.07
ABCA2-222	ENST00000494046	MET	P08581	1390 aa		27.96	■■■□□ 2.07
ABCA2-222	ENST00000494046	SLAIN2	Q9P270	581 aa		27.96	■■■□□ 2.07
ABCA2-222	ENST00000494046	ROBO1	Q9Y6N7	1651 aa		27.95	■■■□□ 2.06
ABCA2-222	ENST00000494046	SETD5	Q9C0A6	1442 aa		27.93	■■■□□ 2.06
ABCA2-222	ENST00000494046	NCOA3	Q9Y6Q9	1424 aa		27.92	■■■□□ 2.06
ABCA2-222	ENST00000494046	VGF	O15240	615 aa	Predicted RBP	27.9	■■■□□ 2.06
ABCA2-222	ENST00000494046	C19orf44	Q9H6X5	657 aa		27.9	■■■□□ 2.06
ABCA2-222	ENST00000494046	CCDC144A	A2RUR9	1427 aa		27.88	■■■□□ 2.05
ABCA2-222	ENST00000494046	RPGRIP1L	Q68CZ1	1315 aa		27.87	■■■□□ 2.05
ABCA2-222	ENST00000494046	XRN1	Q8IZH2	1706 aa	Known RBP	27.87	■■■□□ 2.05
ABCA2-222	ENST00000494046	ATF3	P18847	181 aa		27.87	■■■□□ 2.05
ABCA2-222	ENST00000494046	HRC	P23327	699 aa		27.86	■■■□□ 2.05
ABCA2-222	ENST00000494046	RGL3	Q3MIN7	710 aa		27.86	■■■□□ 2.05
ABCA2-222	ENST00000494046	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.86	■■■□□ 2.05
ABCA2-222	ENST00000494046	CADPS2	Q86UW7	1296 aa		27.85	■■■□□ 2.05
ABCA2-222	ENST00000494046	RAB3GAP2	Q9H2M9	1393 aa		27.84	■■■□□ 2.05
ABCA2-222	ENST00000494046	PHF23	Q9BUL5	403 aa	Predicted RBP	27.84	■■■□□ 2.05
ABCA2-222	ENST00000494046	PPL	O60437	1756 aa		27.81	■■■□□ 2.04
ABCA2-222	ENST00000494046	SPATA31E1	Q6ZUB1	1445 aa		27.79	■■■□□ 2.04
ABCA2-222	ENST00000494046	ADGRF5	Q8IZF2	1346 aa		27.78	■■■□□ 2.04
ABCA2-222	ENST00000494046	SOCS7	O14512	581 aa		27.78	■■■□□ 2.04
ABCA2-222	ENST00000494046	ACIN1	Q9UKV3	1341 aa	Known RBP	27.78	■■■□□ 2.04
ABCA2-222	ENST00000494046	SETD1A	O15047	1707 aa	Known RBP	27.76	■■■□□ 2.03
ABCA2-222	ENST00000494046	PHLPP1	O60346	1717 aa		27.76	■■■□□ 2.03
ABCA2-222	ENST00000494046	DCC	P43146	1447 aa		27.73	■■■□□ 2.03
ABCA2-222	ENST00000494046	BRINP3	Q76B58	766 aa		27.73	■■■□□ 2.03
ABCA2-222	ENST00000494046	ROBO2	Q9HCK4	1378 aa		27.73	■■■□□ 2.03
ABCA2-222	ENST00000494046	ADGRL3	Q9HAR2	1447 aa		27.72	■■■□□ 2.03
ABCA2-222	ENST00000494046	ANKRD30B	Q9BXX2	1392 aa		27.7	■■■□□ 2.02
ABCA2-222	ENST00000494046	MST1R	Q04912	1400 aa		27.69	■■■□□ 2.02
ABCA2-222	ENST00000494046	PTCH1	Q13635	1447 aa		27.69	■■■□□ 2.02
ABCA2-222	ENST00000494046	COL16A1	Q07092	1604 aa	Predicted RBP	27.68	■■■□□ 2.02
ABCA2-222	ENST00000494046	NALCN	Q8IZF0	1738 aa		27.68	■■■□□ 2.02
ABCA2-222	ENST00000494046	JCAD	Q9P266	1359 aa		27.68	■■■□□ 2.02
ABCA2-222	ENST00000494046	RGS17	Q9UGC6	210 aa	Predicted RBP	27.67	■■■□□ 2.02
ABCA2-222	ENST00000494046	IFT172	Q9UG01	1749 aa		27.66	■■■□□ 2.02
ABCA2-222	ENST00000494046	STK26	Q9P289	416 aa		27.65	■■■□□ 2.02
ABCA2-222	ENST00000494046	TMEM132E	Q6IEE7	984 aa		27.64	■■■□□ 2.02
ABCA2-222	ENST00000494046	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.64	■■■□□ 2.02
ABCA2-222	ENST00000494046	ASXL1	Q8IXJ9	1541 aa		27.63	■■■□□ 2.01
ABCA2-222	ENST00000494046	DDX17	Q92841	729 aa	Known RBP	27.62	■■■□□ 2.01
ABCA2-222	ENST00000494046	PIK3C2G	O75747	1445 aa		27.61	■■■□□ 2.01
ABCA2-222	ENST00000494046	PRAG1	Q86YV5	1406 aa		27.61	■■■□□ 2.01
ABCA2-222	ENST00000494046	WAPL	Q7Z5K2	1190 aa		27.58	■■■□□ 2.01
ABCA2-222	ENST00000494046	C1orf167	Q5SNV9	1468 aa		27.57	■■■□□ 2
ABCA2-222	ENST00000494046	LRPPRC	P42704	1394 aa	Known RBP	27.56	■■■□□ 2
ABCA2-222	ENST00000494046	CFAP70	Q5T0N1	1121 aa		27.55	■■■□□ 2
ABCA2-222	ENST00000494046	ORAI2	Q96SN7	254 aa		27.54	■■■□□ 2
ABCA2-222	ENST00000494046	POTEA	Q6S8J7	498 aa		27.53	■■■□□ 2
ABCA2-222	ENST00000494046	C14orf93	Q9H972	538 aa	Known RBP	27.53	■■■□□ 2
ABCA2-222	ENST00000494046	LRP6	O75581	1613 aa		27.53	■■■□□ 2
ABCA2-222	ENST00000494046	SPATA31A6	Q5VVP1	1343 aa		27.53	■■■□□ 2
ABCA2-222	ENST00000494046	PLEKHH1	Q9ULM0	1364 aa		27.52	■■■□□ 2
ABCA2-222	ENST00000494046	NHSL1	Q5SYE7	1610 aa		27.52	■■■□□ 2
ABCA2-222	ENST00000494046	ABCC11	Q96J66	1382 aa		27.52	■■■□□ 2
ABCA2-222	ENST00000494046	TECPR2	O15040	1411 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms