RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 CEP152O94986 1710 aa9.41□□□□□ -0.9
FNDC3B-212ENST00000494000 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
FNDC3B-212ENST00000494000 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
FNDC3B-212ENST00000494000 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
FNDC3B-212ENST00000494000 ABCC3O15438 1527 aa9.4□□□□□ -0.91
FNDC3B-212ENST00000494000 CNTLNQ9NXG0 1405 aa9.4□□□□□ -0.91
FNDC3B-212ENST00000494000 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
FNDC3B-212ENST00000494000 CAMSAP1Q5T5Y3 1602 aa9.39□□□□□ -0.91
FNDC3B-212ENST00000494000 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
FNDC3B-212ENST00000494000 WASHC2CQ9Y4E1 1318 aa9.38□□□□□ -0.91
FNDC3B-212ENST00000494000 RALGAPBQ86X10 1494 aa9.38□□□□□ -0.91
FNDC3B-212ENST00000494000 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
FNDC3B-212ENST00000494000 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
FNDC3B-212ENST00000494000 KIF1BO60333 1816 aa9.37□□□□□ -0.91
FNDC3B-212ENST00000494000 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
FNDC3B-212ENST00000494000 GGT6Q6P531 493 aa9.36□□□□□ -0.91
FNDC3B-212ENST00000494000 LAMC1P11047 1609 aa9.36□□□□□ -0.91
FNDC3B-212ENST00000494000 CLTCL1P53675 1640 aa9.36□□□□□ -0.91
FNDC3B-212ENST00000494000 NOS1P29475 1434 aa9.35□□□□□ -0.91
FNDC3B-212ENST00000494000 NPATQ14207 1427 aa9.35□□□□□ -0.91
FNDC3B-212ENST00000494000 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
FNDC3B-212ENST00000494000 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
FNDC3B-212ENST00000494000 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
FNDC3B-212ENST00000494000 COL17A1Q9UMD9 1497 aaPredicted RBP9.34□□□□□ -0.91
FNDC3B-212ENST00000494000 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
FNDC3B-212ENST00000494000 SLC52A1Q9NWF4 448 aa9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 KIAA1210Q9ULL0 1709 aa9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 MYOM2P54296 1465 aa9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 ARID4BQ4LE39 1312 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
FNDC3B-212ENST00000494000 POLR1AO95602 1720 aaPredicted RBP9.32□□□□□ -0.92
FNDC3B-212ENST00000494000 ADGRB3O60242 1522 aa9.32□□□□□ -0.92
FNDC3B-212ENST00000494000 GPRASP1Q5JY77 1395 aa9.32□□□□□ -0.92
FNDC3B-212ENST00000494000 FGD1P98174 961 aa9.32□□□□□ -0.92
FNDC3B-212ENST00000494000 PREX1Q8TCU6 1659 aa9.31□□□□□ -0.92
FNDC3B-212ENST00000494000 A0A0U1RQG5 324 aaPredicted RBP9.31□□□□□ -0.92
FNDC3B-212ENST00000494000 HSPA5P11021 654 aaKnown RBP9.31□□□□□ -0.92
FNDC3B-212ENST00000494000 IFT172Q9UG01 1749 aa9.3□□□□□ -0.92
FNDC3B-212ENST00000494000 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
FNDC3B-212ENST00000494000 MROH2AA6NES4 1674 aa9.3□□□□□ -0.92
FNDC3B-212ENST00000494000 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
FNDC3B-212ENST00000494000 MADDQ8WXG6 1647 aa9.3□□□□□ -0.92
FNDC3B-212ENST00000494000 NEFLP07196 543 aa9.29□□□□□ -0.92
FNDC3B-212ENST00000494000 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
FNDC3B-212ENST00000494000 ROCK2O75116 1388 aaKnown RBP9.29□□□□□ -0.92
FNDC3B-212ENST00000494000 USP47Q96K76 1375 aa9.29□□□□□ -0.92
FNDC3B-212ENST00000494000 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
FNDC3B-212ENST00000494000 CLTCQ00610 1675 aaKnown RBP9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 SPATA31D1Q6ZQQ2 1576 aa9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 SYNMO15061 1565 aa9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 ZNF326Q5BKZ1 582 aaKnown RBP9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
FNDC3B-212ENST00000494000 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.92
FNDC3B-212ENST00000494000 PPLO60437 1756 aa9.27□□□□□ -0.93
FNDC3B-212ENST00000494000 ZFYVE9O95405 1425 aa9.27□□□□□ -0.93
FNDC3B-212ENST00000494000 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
FNDC3B-212ENST00000494000 BRPF3Q9ULD4 1205 aa9.27□□□□□ -0.93
FNDC3B-212ENST00000494000 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
FNDC3B-212ENST00000494000 SETBP1Q9Y6X0 1596 aa9.26□□□□□ -0.93
FNDC3B-212ENST00000494000 VGFO15240 615 aaPredicted RBP9.25□□□□□ -0.93
FNDC3B-212ENST00000494000 EIF3AQ14152 1382 aaKnown RBP9.25□□□□□ -0.93
FNDC3B-212ENST00000494000 UGGT1Q9NYU2 1555 aa9.25□□□□□ -0.93
FNDC3B-212ENST00000494000 CCDC7Q96M83 1385 aa9.24□□□□□ -0.93
FNDC3B-212ENST00000494000 TMEM131LA2VDJ0 1609 aa9.24□□□□□ -0.93
FNDC3B-212ENST00000494000 CFAP65Q6ZU64 1925 aaKnown RBP9.24□□□□□ -0.93
FNDC3B-212ENST00000494000 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
FNDC3B-212ENST00000494000 SCAF11Q99590 1463 aaKnown RBP9.23□□□□□ -0.93
FNDC3B-212ENST00000494000 IQGAP1P46940 1657 aa9.23□□□□□ -0.93
FNDC3B-212ENST00000494000 CENPBP07199 599 aaPredicted RBP9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 IDI1Q13907 227 aa9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 NEXMIFQ5QGS0 1516 aa9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 CHGAP10645 457 aaKnown RBP9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
FNDC3B-212ENST00000494000 CDCA8Q53HL2 280 aa9.21□□□□□ -0.93
FNDC3B-212ENST00000494000 WASHC2AQ641Q2 1341 aa9.21□□□□□ -0.93
FNDC3B-212ENST00000494000 NLRP1Q9C000 1473 aa9.21□□□□□ -0.94
FNDC3B-212ENST00000494000 ANP32CO43423 234 aa9.2□□□□□ -0.94
FNDC3B-212ENST00000494000 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.2□□□□□ -0.94
FNDC3B-212ENST00000494000 C14orf93Q9H972 538 aaKnown RBP9.2□□□□□ -0.94
FNDC3B-212ENST00000494000 TNRQ92752 1358 aa9.2□□□□□ -0.94
FNDC3B-212ENST00000494000 FER1L4A9Z1Z3 1794 aa9.2□□□□□ -0.94
FNDC3B-212ENST00000494000 MLECQ14165 292 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 MIER1Q8N108 512 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 HIRIP3Q9BW71 556 aaPredicted RBP9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 KIF7Q2M1P5 1343 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 ST20-MTHFSA0A0A6YYL1 179 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 TMF1P82094 1093 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 NBPF1Q3BBV0 1214 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 MYO3AQ8NEV4 1616 aa9.19□□□□□ -0.94
FNDC3B-212ENST00000494000 CCER2I3L3R5 266 aa9.18□□□□□ -0.94
FNDC3B-212ENST00000494000 TMED8Q6PL24 325 aaPredicted RBP9.18□□□□□ -0.94
FNDC3B-212ENST00000494000 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
FNDC3B-212ENST00000494000 SBNO2Q9Y2G9 1366 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms