RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
NUDCD3-210ENST00000493613 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
NUDCD3-210ENST00000493613 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
NUDCD3-210ENST00000493613 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
NUDCD3-210ENST00000493613 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
NUDCD3-210ENST00000493613 ZFYVE9O95405 1425 aa15.82■□□□□ 0.12
NUDCD3-210ENST00000493613 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
NUDCD3-210ENST00000493613 KCNA6P17658 529 aa15.81■□□□□ 0.12
NUDCD3-210ENST00000493613 BCANQ96GW7 911 aa15.8■□□□□ 0.12
NUDCD3-210ENST00000493613 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
NUDCD3-210ENST00000493613 RIMS2Q9UQ26 1411 aa15.79■□□□□ 0.12
NUDCD3-210ENST00000493613 PLEKHG1Q9ULL1 1385 aa15.78■□□□□ 0.12
NUDCD3-210ENST00000493613 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
NUDCD3-210ENST00000493613 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
NUDCD3-210ENST00000493613 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.12
NUDCD3-210ENST00000493613 PPP1R15AO75807 674 aaPredicted RBP15.77■□□□□ 0.12
NUDCD3-210ENST00000493613 RBM33Q96EV2 1170 aaKnown RBP15.77■□□□□ 0.12
NUDCD3-210ENST00000493613 DIP2AQ14689 1571 aa15.77■□□□□ 0.11
NUDCD3-210ENST00000493613 ITGAEP38570 1179 aa15.75■□□□□ 0.11
NUDCD3-210ENST00000493613 HDGFP51858 240 aaKnown RBP15.75■□□□□ 0.11
NUDCD3-210ENST00000493613 MSH6P52701 1360 aa15.75■□□□□ 0.11
NUDCD3-210ENST00000493613 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
NUDCD3-210ENST00000493613 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.74■□□□□ 0.11
NUDCD3-210ENST00000493613 NUP155O75694 1391 aa15.74■□□□□ 0.11
NUDCD3-210ENST00000493613 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
NUDCD3-210ENST00000493613 KIF1BO60333 1816 aa15.73■□□□□ 0.11
NUDCD3-210ENST00000493613 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUDCD3-210ENST00000493613 TRPM2O94759 1503 aa15.72■□□□□ 0.11
NUDCD3-210ENST00000493613 ADAMTS13Q76LX8 1427 aa15.7■□□□□ 0.1
NUDCD3-210ENST00000493613 NRXN3Q9Y4C0 1643 aa15.7■□□□□ 0.1
NUDCD3-210ENST00000493613 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
NUDCD3-210ENST00000493613 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
NUDCD3-210ENST00000493613 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
NUDCD3-210ENST00000493613 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
NUDCD3-210ENST00000493613 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
NUDCD3-210ENST00000493613 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
NUDCD3-210ENST00000493613 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
NUDCD3-210ENST00000493613 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
NUDCD3-210ENST00000493613 PIK3R4Q99570 1358 aa15.66■□□□□ 0.1
NUDCD3-210ENST00000493613 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
NUDCD3-210ENST00000493613 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
NUDCD3-210ENST00000493613 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
NUDCD3-210ENST00000493613 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
NUDCD3-210ENST00000493613 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
NUDCD3-210ENST00000493613 SETD1AO15047 1707 aaKnown RBP15.63■□□□□ 0.09
NUDCD3-210ENST00000493613 AHDC1Q5TGY3 1603 aaPredicted RBP15.62■□□□□ 0.09
NUDCD3-210ENST00000493613 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
NUDCD3-210ENST00000493613 NALCNQ8IZF0 1738 aa15.61■□□□□ 0.09
NUDCD3-210ENST00000493613 NAIPQ13075 1403 aa15.6■□□□□ 0.09
NUDCD3-210ENST00000493613 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
NUDCD3-210ENST00000493613 AMOTL2Q9Y2J4 779 aa15.6■□□□□ 0.09
NUDCD3-210ENST00000493613 JCADQ9P266 1359 aa15.6■□□□□ 0.09
NUDCD3-210ENST00000493613 NHSL1Q5SYE7 1610 aa15.59■□□□□ 0.09
NUDCD3-210ENST00000493613 ATF3P18847 181 aa15.59■□□□□ 0.09
NUDCD3-210ENST00000493613 CADPS2Q86UW7 1296 aa15.59■□□□□ 0.09
NUDCD3-210ENST00000493613 C19orf44Q9H6X5 657 aa15.59■□□□□ 0.09
NUDCD3-210ENST00000493613 PPLO60437 1756 aa15.59■□□□□ 0.09
NUDCD3-210ENST00000493613 DCCP43146 1447 aa15.57■□□□□ 0.08
NUDCD3-210ENST00000493613 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
NUDCD3-210ENST00000493613 LRP6O75581 1613 aa15.54■□□□□ 0.08
NUDCD3-210ENST00000493613 ASXL1Q8IXJ9 1541 aa15.54■□□□□ 0.08
NUDCD3-210ENST00000493613 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
NUDCD3-210ENST00000493613 METP08581 1390 aa15.54■□□□□ 0.08
NUDCD3-210ENST00000493613 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.08
NUDCD3-210ENST00000493613 MST1RQ04912 1400 aa15.51■□□□□ 0.07
NUDCD3-210ENST00000493613 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
NUDCD3-210ENST00000493613 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
NUDCD3-210ENST00000493613 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
NUDCD3-210ENST00000493613 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
NUDCD3-210ENST00000493613 MEX3CQ5U5Q3 659 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-210ENST00000493613 LAMC1P11047 1609 aa15.47■□□□□ 0.07
NUDCD3-210ENST00000493613 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
NUDCD3-210ENST00000493613 PTCH1Q13635 1447 aa15.46■□□□□ 0.07
NUDCD3-210ENST00000493613 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.07
NUDCD3-210ENST00000493613 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.07
NUDCD3-210ENST00000493613 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 NUTM2BA6NNL0 878 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 NUTM2EB1AL46 878 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 ZNF772Q68DY9 489 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 NUTM2AQ8IVF1 878 aaPredicted RBP15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
NUDCD3-210ENST00000493613 KNDC1Q76NI1 1749 aa15.42■□□□□ 0.06
NUDCD3-210ENST00000493613 C1orf167Q5SNV9 1468 aa15.41■□□□□ 0.06
NUDCD3-210ENST00000493613 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
NUDCD3-210ENST00000493613 LRRC59Q96AG4 307 aaKnown RBP15.41■□□□□ 0.06
NUDCD3-210ENST00000493613 FOXD1Q16676 465 aa15.4■□□□□ 0.06
NUDCD3-210ENST00000493613 DDX17Q92841 729 aaKnown RBP15.4■□□□□ 0.06
NUDCD3-210ENST00000493613 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
NUDCD3-210ENST00000493613 CDC42BPGQ6DT37 1551 aa15.4■□□□□ 0.06
NUDCD3-210ENST00000493613 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
NUDCD3-210ENST00000493613 PNPLA6Q8IY17 1366 aa15.38■□□□□ 0.05
NUDCD3-210ENST00000493613 COL22A1Q8NFW1 1626 aaPredicted RBP15.38■□□□□ 0.05
NUDCD3-210ENST00000493613 AFF2P51816 1311 aa15.37■□□□□ 0.05
NUDCD3-210ENST00000493613 RGPD8O14715 1765 aaPredicted RBP15.36■□□□□ 0.05
NUDCD3-210ENST00000493613 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
NUDCD3-210ENST00000493613 CDK12Q9NYV4 1490 aaPredicted RBP15.35■□□□□ 0.05
NUDCD3-210ENST00000493613 FMN2Q9NZ56 1722 aa15.35■□□□□ 0.05
NUDCD3-210ENST00000493613 RXRBP28702 533 aa15.35■□□□□ 0.05
NUDCD3-210ENST00000493613 ORAI2Q96SN7 254 aa15.35■□□□□ 0.05
NUDCD3-210ENST00000493613 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms