RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
SMG7-208ENST00000493609 PNMA3Q9UL41 463 aa12.6□□□□□ -0.39
SMG7-208ENST00000493609 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
SMG7-208ENST00000493609 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
SMG7-208ENST00000493609 CLCN1P35523 988 aa12.58□□□□□ -0.4
SMG7-208ENST00000493609 TMUB1Q9BVT8 246 aa12.58□□□□□ -0.4
SMG7-208ENST00000493609 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
SMG7-208ENST00000493609 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
SMG7-208ENST00000493609 FAM117AQ9C073 453 aa12.57□□□□□ -0.4
SMG7-208ENST00000493609 RCCD1A6NED2 376 aa12.56□□□□□ -0.4
SMG7-208ENST00000493609 MS4A1P11836 297 aa12.55□□□□□ -0.4
SMG7-208ENST00000493609 ANKK1Q8NFD2 765 aa12.55□□□□□ -0.4
SMG7-208ENST00000493609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
SMG7-208ENST00000493609 BCAMP50895 628 aa12.53□□□□□ -0.4
SMG7-208ENST00000493609 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
SMG7-208ENST00000493609 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
SMG7-208ENST00000493609 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
SMG7-208ENST00000493609 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
SMG7-208ENST00000493609 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
SMG7-208ENST00000493609 DNAJB2P25686 324 aa12.5□□□□□ -0.41
SMG7-208ENST00000493609 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
SMG7-208ENST00000493609 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
SMG7-208ENST00000493609 SOWAHBA6NEL2 793 aa12.49□□□□□ -0.41
SMG7-208ENST00000493609 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
SMG7-208ENST00000493609 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
SMG7-208ENST00000493609 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
SMG7-208ENST00000493609 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
SMG7-208ENST00000493609 A0A0G2JS52 829 aa12.44□□□□□ -0.42
SMG7-208ENST00000493609 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
SMG7-208ENST00000493609 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
SMG7-208ENST00000493609 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
SMG7-208ENST00000493609 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
SMG7-208ENST00000493609 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
SMG7-208ENST00000493609 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
SMG7-208ENST00000493609 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
SMG7-208ENST00000493609 RGS20O76081 388 aa12.38□□□□□ -0.43
SMG7-208ENST00000493609 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
SMG7-208ENST00000493609 CD46P15529 392 aa12.37□□□□□ -0.43
SMG7-208ENST00000493609 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
SMG7-208ENST00000493609 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
SMG7-208ENST00000493609 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
SMG7-208ENST00000493609 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
SMG7-208ENST00000493609 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
SMG7-208ENST00000493609 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
SMG7-208ENST00000493609 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
SMG7-208ENST00000493609 SLC10A3P09131 477 aa12.33□□□□□ -0.44
SMG7-208ENST00000493609 RNF40O75150 1001 aa12.31□□□□□ -0.44
SMG7-208ENST00000493609 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
SMG7-208ENST00000493609 KCNC4Q03721 635 aa12.3□□□□□ -0.44
SMG7-208ENST00000493609 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
SMG7-208ENST00000493609 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
SMG7-208ENST00000493609 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
SMG7-208ENST00000493609 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
SMG7-208ENST00000493609 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
SMG7-208ENST00000493609 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
SMG7-208ENST00000493609 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
SMG7-208ENST00000493609 PPP4CP60510 307 aa12.28□□□□□ -0.44
SMG7-208ENST00000493609 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
SMG7-208ENST00000493609 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
SMG7-208ENST00000493609 GCGRP47871 477 aa12.27□□□□□ -0.45
SMG7-208ENST00000493609 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
SMG7-208ENST00000493609 SKIV2LQ15477 1246 aaKnown RBP12.27□□□□□ -0.45
SMG7-208ENST00000493609 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
SMG7-208ENST00000493609 IRX2Q9BZI1 471 aaPredicted RBP12.26□□□□□ -0.45
SMG7-208ENST00000493609 PROCA1Q8NCQ7 364 aaPredicted RBP12.25□□□□□ -0.45
SMG7-208ENST00000493609 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
SMG7-208ENST00000493609 KDM4AO75164 1064 aa12.24□□□□□ -0.45
SMG7-208ENST00000493609 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
SMG7-208ENST00000493609 MOXD2PA6NHM9 499 aa12.22□□□□□ -0.45
SMG7-208ENST00000493609 CFHP08603 1231 aa12.22□□□□□ -0.45
SMG7-208ENST00000493609 NDUFV2P19404 249 aa12.22□□□□□ -0.45
SMG7-208ENST00000493609 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
SMG7-208ENST00000493609 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.45
SMG7-208ENST00000493609 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
SMG7-208ENST00000493609 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
SMG7-208ENST00000493609 FUT2Q10981 343 aa12.18□□□□□ -0.46
SMG7-208ENST00000493609 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
SMG7-208ENST00000493609 HLA-CQ95604 372 aa12.18□□□□□ -0.46
SMG7-208ENST00000493609 SPTLC1O15269 473 aa12.17□□□□□ -0.46
SMG7-208ENST00000493609 HOXA2O43364 376 aa12.17□□□□□ -0.46
SMG7-208ENST00000493609 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
SMG7-208ENST00000493609 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMG7-208ENST00000493609 USP46P62068 366 aa12.16□□□□□ -0.46
SMG7-208ENST00000493609 GUCA2AQ02747 115 aa12.16□□□□□ -0.46
SMG7-208ENST00000493609 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.46
SMG7-208ENST00000493609 MTRQ99707 1265 aa12.15□□□□□ -0.46
SMG7-208ENST00000493609 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
SMG7-208ENST00000493609 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
SMG7-208ENST00000493609 APLP1P51693 650 aa12.13□□□□□ -0.47
SMG7-208ENST00000493609 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
SMG7-208ENST00000493609 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
SMG7-208ENST00000493609 FDX1P10109 184 aa12.12□□□□□ -0.47
SMG7-208ENST00000493609 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
SMG7-208ENST00000493609 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
SMG7-208ENST00000493609 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
SMG7-208ENST00000493609 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
SMG7-208ENST00000493609 QPCTQ16769 361 aa12.11□□□□□ -0.47
SMG7-208ENST00000493609 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
SMG7-208ENST00000493609 PCDHGC3Q9UN70 934 aa12.11□□□□□ -0.47
SMG7-208ENST00000493609 GJA5P36382 358 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms