RNA–Protein interactions for RNA: ENST00000493606.1

ARFGAP3-206, Transcript of ADP ribosylation factor GTPase activating protein 3, humanhuman

TSL 2

Gene ARFGAP3, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3-206ENST00000493606 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
ARFGAP3-206ENST00000493606 ZFYVE9O95405 1425 aa21.42■■□□□ 1.02
ARFGAP3-206ENST00000493606 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
ARFGAP3-206ENST00000493606 SLC52A1Q9NWF4 448 aa21.42■■□□□ 1.02
ARFGAP3-206ENST00000493606 NUP155O75694 1391 aa21.4■■□□□ 1.02
ARFGAP3-206ENST00000493606 SLC26A8Q96RN1 970 aa21.4■■□□□ 1.02
ARFGAP3-206ENST00000493606 CHD2O14647 1828 aaKnown RBP21.39■■□□□ 1.01
ARFGAP3-206ENST00000493606 SPHKAPQ2M3C7 1700 aa21.38■■□□□ 1.01
ARFGAP3-206ENST00000493606 TMEM94Q12767 1356 aa21.38■■□□□ 1.01
ARFGAP3-206ENST00000493606 ROBO1Q9Y6N7 1651 aa21.35■■□□□ 1.01
ARFGAP3-206ENST00000493606 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
ARFGAP3-206ENST00000493606 KCNA6P17658 529 aa21.35■■□□□ 1.01
ARFGAP3-206ENST00000493606 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
ARFGAP3-206ENST00000493606 RIMS2Q9UQ26 1411 aa21.35■■□□□ 1.01
ARFGAP3-206ENST00000493606 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
ARFGAP3-206ENST00000493606 NAIPQ13075 1403 aa21.3■■□□□ 1
ARFGAP3-206ENST00000493606 FAM135BQ49AJ0 1406 aa21.3■■□□□ 1
ARFGAP3-206ENST00000493606 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
ARFGAP3-206ENST00000493606 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
ARFGAP3-206ENST00000493606 PROSER2Q86WR7 435 aaPredicted RBP21.28■■□□□ 1
ARFGAP3-206ENST00000493606 BCANQ96GW7 911 aa21.28■■□□□ 1
ARFGAP3-206ENST00000493606 ADAMTS13Q76LX8 1427 aa21.28■■□□□ 1
ARFGAP3-206ENST00000493606 KIF1BO60333 1816 aa21.25■□□□□ 0.99
ARFGAP3-206ENST00000493606 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
ARFGAP3-206ENST00000493606 DIP2AQ14689 1571 aa21.24■□□□□ 0.99
ARFGAP3-206ENST00000493606 HDGFP51858 240 aaKnown RBP21.24■□□□□ 0.99
ARFGAP3-206ENST00000493606 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
ARFGAP3-206ENST00000493606 NRXN3Q9Y4C0 1643 aa21.24■□□□□ 0.99
ARFGAP3-206ENST00000493606 CLTCL1P53675 1640 aa21.22■□□□□ 0.99
ARFGAP3-206ENST00000493606 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
ARFGAP3-206ENST00000493606 RGS17Q9UGC6 210 aaPredicted RBP21.22■□□□□ 0.99
ARFGAP3-206ENST00000493606 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
ARFGAP3-206ENST00000493606 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
ARFGAP3-206ENST00000493606 TRPM2O94759 1503 aa21.2■□□□□ 0.98
ARFGAP3-206ENST00000493606 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.2■□□□□ 0.98
ARFGAP3-206ENST00000493606 MSH6P52701 1360 aa21.2■□□□□ 0.98
ARFGAP3-206ENST00000493606 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
ARFGAP3-206ENST00000493606 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
ARFGAP3-206ENST00000493606 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
ARFGAP3-206ENST00000493606 COL16A1Q07092 1604 aaPredicted RBP21.17■□□□□ 0.98
ARFGAP3-206ENST00000493606 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
ARFGAP3-206ENST00000493606 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.98
ARFGAP3-206ENST00000493606 SLAIN2Q9P270 581 aa21.14■□□□□ 0.97
ARFGAP3-206ENST00000493606 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
ARFGAP3-206ENST00000493606 NCOA3Q9Y6Q9 1424 aa21.12■□□□□ 0.97
ARFGAP3-206ENST00000493606 PIK3R4Q99570 1358 aa21.12■□□□□ 0.97
ARFGAP3-206ENST00000493606 NEXMIFQ5QGS0 1516 aa21.12■□□□□ 0.97
ARFGAP3-206ENST00000493606 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
ARFGAP3-206ENST00000493606 AHDC1Q5TGY3 1603 aaPredicted RBP21.08■□□□□ 0.97
ARFGAP3-206ENST00000493606 SETD1AO15047 1707 aaKnown RBP21.07■□□□□ 0.96
ARFGAP3-206ENST00000493606 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
ARFGAP3-206ENST00000493606 AMOTL2Q9Y2J4 779 aa21.06■□□□□ 0.96
ARFGAP3-206ENST00000493606 PPLO60437 1756 aa21.05■□□□□ 0.96
ARFGAP3-206ENST00000493606 LRP6O75581 1613 aa21.05■□□□□ 0.96
ARFGAP3-206ENST00000493606 METP08581 1390 aa21.05■□□□□ 0.96
ARFGAP3-206ENST00000493606 NALCNQ8IZF0 1738 aa21.04■□□□□ 0.96
ARFGAP3-206ENST00000493606 JCADQ9P266 1359 aa21.04■□□□□ 0.96
ARFGAP3-206ENST00000493606 SHPRHQ149N8 1683 aa21.04■□□□□ 0.96
ARFGAP3-206ENST00000493606 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
ARFGAP3-206ENST00000493606 C19orf44Q9H6X5 657 aa21.03■□□□□ 0.96
ARFGAP3-206ENST00000493606 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
ARFGAP3-206ENST00000493606 FOXD1Q16676 465 aa21■□□□□ 0.95
ARFGAP3-206ENST00000493606 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
ARFGAP3-206ENST00000493606 DCCP43146 1447 aa21■□□□□ 0.95
ARFGAP3-206ENST00000493606 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
ARFGAP3-206ENST00000493606 MST1RQ04912 1400 aa20.98■□□□□ 0.95
ARFGAP3-206ENST00000493606 ATF3P18847 181 aa20.98■□□□□ 0.95
ARFGAP3-206ENST00000493606 BRINP3Q76B58 766 aa20.97■□□□□ 0.95
ARFGAP3-206ENST00000493606 CCDC144AA2RUR9 1427 aa20.96■□□□□ 0.95
ARFGAP3-206ENST00000493606 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
ARFGAP3-206ENST00000493606 SETD5Q9C0A6 1442 aa20.95■□□□□ 0.95
ARFGAP3-206ENST00000493606 MPHOSPH9Q99550 1183 aa20.95■□□□□ 0.94
ARFGAP3-206ENST00000493606 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
ARFGAP3-206ENST00000493606 RPGRIP1LQ68CZ1 1315 aa20.93■□□□□ 0.94
ARFGAP3-206ENST00000493606 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
ARFGAP3-206ENST00000493606 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
ARFGAP3-206ENST00000493606 PTCH1Q13635 1447 aa20.89■□□□□ 0.94
ARFGAP3-206ENST00000493606 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.93
ARFGAP3-206ENST00000493606 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
ARFGAP3-206ENST00000493606 ROBO2Q9HCK4 1378 aa20.88■□□□□ 0.93
ARFGAP3-206ENST00000493606 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
ARFGAP3-206ENST00000493606 LAMC1P11047 1609 aa20.87■□□□□ 0.93
ARFGAP3-206ENST00000493606 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
ARFGAP3-206ENST00000493606 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
ARFGAP3-206ENST00000493606 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
ARFGAP3-206ENST00000493606 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
ARFGAP3-206ENST00000493606 MEX3CQ5U5Q3 659 aaKnown RBP20.81■□□□□ 0.92
ARFGAP3-206ENST00000493606 ANKRD30BQ9BXX2 1392 aa20.81■□□□□ 0.92
ARFGAP3-206ENST00000493606 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 NUTM2BA6NNL0 878 aaPredicted RBP20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 NUTM2EB1AL46 878 aaPredicted RBP20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 NUTM2AQ8IVF1 878 aaPredicted RBP20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 PNPLA6Q8IY17 1366 aa20.8■□□□□ 0.92
ARFGAP3-206ENST00000493606 PIK3C2GO75747 1445 aa20.77■□□□□ 0.91
ARFGAP3-206ENST00000493606 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
ARFGAP3-206ENST00000493606 ZNF772Q68DY9 489 aaPredicted RBP20.76■□□□□ 0.91
ARFGAP3-206ENST00000493606 ORAI2Q96SN7 254 aa20.76■□□□□ 0.91
ARFGAP3-206ENST00000493606 LRRC59Q96AG4 307 aaKnown RBP20.75■□□□□ 0.91
ARFGAP3-206ENST00000493606 AFF2P51816 1311 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms