RNA–Protein interactions for RNA: ENST00000493489.1

ATP11A-214, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 3

Gene ATP11A, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-214ENST00000493489 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
ATP11A-214ENST00000493489 APLP2Q06481 763 aa16.86■□□□□ 0.29
ATP11A-214ENST00000493489 RBM33Q96EV2 1170 aaKnown RBP16.86■□□□□ 0.29
ATP11A-214ENST00000493489 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
ATP11A-214ENST00000493489 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
ATP11A-214ENST00000493489 POTEAQ6S8J7 498 aa16.85■□□□□ 0.29
ATP11A-214ENST00000493489 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
ATP11A-214ENST00000493489 MSH6P52701 1360 aa16.85■□□□□ 0.29
ATP11A-214ENST00000493489 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
ATP11A-214ENST00000493489 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
ATP11A-214ENST00000493489 ANKRD50Q9ULJ7 1429 aa16.82■□□□□ 0.28
ATP11A-214ENST00000493489 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
ATP11A-214ENST00000493489 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
ATP11A-214ENST00000493489 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
ATP11A-214ENST00000493489 UNC13BO14795 1591 aa16.8■□□□□ 0.28
ATP11A-214ENST00000493489 JCADQ9P266 1359 aa16.79■□□□□ 0.28
ATP11A-214ENST00000493489 BCANQ96GW7 911 aa16.79■□□□□ 0.28
ATP11A-214ENST00000493489 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
ATP11A-214ENST00000493489 E9PCH4 1651 aa16.77■□□□□ 0.28
ATP11A-214ENST00000493489 NCOA3Q9Y6Q9 1424 aa16.77■□□□□ 0.27
ATP11A-214ENST00000493489 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
ATP11A-214ENST00000493489 PPP1R15AO75807 674 aaPredicted RBP16.76■□□□□ 0.27
ATP11A-214ENST00000493489 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
ATP11A-214ENST00000493489 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.75■□□□□ 0.27
ATP11A-214ENST00000493489 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
ATP11A-214ENST00000493489 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
ATP11A-214ENST00000493489 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
ATP11A-214ENST00000493489 TBX22Q9Y458 520 aa16.74■□□□□ 0.27
ATP11A-214ENST00000493489 LRP6O75581 1613 aa16.74■□□□□ 0.27
ATP11A-214ENST00000493489 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
ATP11A-214ENST00000493489 IQGAP3Q86VI3 1631 aa16.73■□□□□ 0.27
ATP11A-214ENST00000493489 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
ATP11A-214ENST00000493489 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATP11A-214ENST00000493489 TRPM2O94759 1503 aa16.7■□□□□ 0.26
ATP11A-214ENST00000493489 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
ATP11A-214ENST00000493489 CHGAP10645 457 aaKnown RBP16.68■□□□□ 0.26
ATP11A-214ENST00000493489 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
ATP11A-214ENST00000493489 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
ATP11A-214ENST00000493489 C19orf44Q9H6X5 657 aa16.67■□□□□ 0.26
ATP11A-214ENST00000493489 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
ATP11A-214ENST00000493489 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
ATP11A-214ENST00000493489 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
ATP11A-214ENST00000493489 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
ATP11A-214ENST00000493489 DCCP43146 1447 aa16.65■□□□□ 0.26
ATP11A-214ENST00000493489 PTPRUQ92729 1446 aa16.65■□□□□ 0.26
ATP11A-214ENST00000493489 ATF3P18847 181 aa16.65■□□□□ 0.26
ATP11A-214ENST00000493489 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
ATP11A-214ENST00000493489 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
ATP11A-214ENST00000493489 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
ATP11A-214ENST00000493489 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
ATP11A-214ENST00000493489 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
ATP11A-214ENST00000493489 ASXL1Q8IXJ9 1541 aa16.62■□□□□ 0.25
ATP11A-214ENST00000493489 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
ATP11A-214ENST00000493489 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
ATP11A-214ENST00000493489 NUP155O75694 1391 aa16.61■□□□□ 0.25
ATP11A-214ENST00000493489 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■□□□□ 9.5
ATP11A-214ENST00000493489 MST1RQ04912 1400 aa16.59■□□□□ 0.25
ATP11A-214ENST00000493489 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
ATP11A-214ENST00000493489 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
ATP11A-214ENST00000493489 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
ATP11A-214ENST00000493489 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
ATP11A-214ENST00000493489 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
ATP11A-214ENST00000493489 METP08581 1390 aa16.54■□□□□ 0.24
ATP11A-214ENST00000493489 NUTM2BA6NNL0 878 aaPredicted RBP16.54■□□□□ 0.24
ATP11A-214ENST00000493489 NUTM2EB1AL46 878 aaPredicted RBP16.54■□□□□ 0.24
ATP11A-214ENST00000493489 RXRBP28702 533 aa16.54■□□□□ 0.24
ATP11A-214ENST00000493489 NUTM2AQ8IVF1 878 aaPredicted RBP16.54■□□□□ 0.24
ATP11A-214ENST00000493489 AFF2P51816 1311 aa16.53■□□□□ 0.24
ATP11A-214ENST00000493489 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
ATP11A-214ENST00000493489 CLTCL1P53675 1640 aa16.52■□□□□ 0.24
ATP11A-214ENST00000493489 LAMC1P11047 1609 aa16.51■□□□□ 0.23
ATP11A-214ENST00000493489 KIF1BO60333 1816 aa16.5■□□□□ 0.23
ATP11A-214ENST00000493489 ZNF326Q5BKZ1 582 aaKnown RBP16.5■□□□□ 0.23
ATP11A-214ENST00000493489 PNPLA6Q8IY17 1366 aa16.5■□□□□ 0.23
ATP11A-214ENST00000493489 RGS12O14924 1447 aa16.49■□□□□ 0.23
ATP11A-214ENST00000493489 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
ATP11A-214ENST00000493489 ITGAEP38570 1179 aa16.48■□□□□ 0.23
ATP11A-214ENST00000493489 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
ATP11A-214ENST00000493489 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
ATP11A-214ENST00000493489 C1orf167Q5SNV9 1468 aa16.46■□□□□ 0.23
ATP11A-214ENST00000493489 SRCAPQ6ZRS2 3230 aa16.45■□□□□ 0.22
ATP11A-214ENST00000493489 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
ATP11A-214ENST00000493489 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
ATP11A-214ENST00000493489 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
ATP11A-214ENST00000493489 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
ATP11A-214ENST00000493489 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
ATP11A-214ENST00000493489 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
ATP11A-214ENST00000493489 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
ATP11A-214ENST00000493489 PPLO60437 1756 aa16.39■□□□□ 0.21
ATP11A-214ENST00000493489 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
ATP11A-214ENST00000493489 NAIPQ13075 1403 aa16.38■□□□□ 0.21
ATP11A-214ENST00000493489 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
ATP11A-214ENST00000493489 EP400Q96L91 3159 aa16.37■□□□□ 0.21
ATP11A-214ENST00000493489 ORAI2Q96SN7 254 aa16.37■□□□□ 0.21
ATP11A-214ENST00000493489 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
ATP11A-214ENST00000493489 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
ATP11A-214ENST00000493489 CDC42BPGQ6DT37 1551 aa16.36■□□□□ 0.21
ATP11A-214ENST00000493489 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
ATP11A-214ENST00000493489 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
ATP11A-214ENST00000493489 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms