RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 CLTCL1P53675 1640 aa13.56□□□□□ -0.24
TM4SF1-203ENST00000493298 NRXN3Q9Y4C0 1643 aa13.56□□□□□ -0.24
TM4SF1-203ENST00000493298 NUP155O75694 1391 aa13.55□□□□□ -0.24
TM4SF1-203ENST00000493298 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
TM4SF1-203ENST00000493298 TRPM2O94759 1503 aa13.53□□□□□ -0.24
TM4SF1-203ENST00000493298 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
TM4SF1-203ENST00000493298 SETD1AO15047 1707 aaKnown RBP13.5□□□□□ -0.25
TM4SF1-203ENST00000493298 KIF1BO60333 1816 aa13.5□□□□□ -0.25
TM4SF1-203ENST00000493298 ADAMTS13Q76LX8 1427 aa13.49□□□□□ -0.25
TM4SF1-203ENST00000493298 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
TM4SF1-203ENST00000493298 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
TM4SF1-203ENST00000493298 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
TM4SF1-203ENST00000493298 SETBP1Q9Y6X0 1596 aa13.46□□□□□ -0.25
TM4SF1-203ENST00000493298 PPLO60437 1756 aa13.46□□□□□ -0.25
TM4SF1-203ENST00000493298 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.25
TM4SF1-203ENST00000493298 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
TM4SF1-203ENST00000493298 DIP2AQ14689 1571 aa13.45□□□□□ -0.26
TM4SF1-203ENST00000493298 NKTRP30414 1462 aaKnown RBP13.44□□□□□ -0.26
TM4SF1-203ENST00000493298 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
TM4SF1-203ENST00000493298 FOXD1Q16676 465 aa13.42□□□□□ -0.26
TM4SF1-203ENST00000493298 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
TM4SF1-203ENST00000493298 EID1Q9Y6B2 187 aa13.42□□□□□ -0.26
TM4SF1-203ENST00000493298 PTPRUQ92729 1446 aa13.41□□□□□ -0.26
TM4SF1-203ENST00000493298 UBAP1LF5GYI3 381 aa13.4□□□□□ -0.26
TM4SF1-203ENST00000493298 KCNA6P17658 529 aa13.39□□□□□ -0.27
TM4SF1-203ENST00000493298 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
TM4SF1-203ENST00000493298 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
TM4SF1-203ENST00000493298 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 CCER1Q8TC90 406 aaPredicted RBP13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
TM4SF1-203ENST00000493298 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
TM4SF1-203ENST00000493298 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
TM4SF1-203ENST00000493298 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
TM4SF1-203ENST00000493298 PIK3R4Q99570 1358 aa13.35□□□□□ -0.27
TM4SF1-203ENST00000493298 NALCNQ8IZF0 1738 aa13.35□□□□□ -0.27
TM4SF1-203ENST00000493298 PRAG1Q86YV5 1406 aa13.34□□□□□ -0.27
TM4SF1-203ENST00000493298 HSPA1LP34931 641 aa13.34□□□□□ -0.27
TM4SF1-203ENST00000493298 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
TM4SF1-203ENST00000493298 METP08581 1390 aa13.33□□□□□ -0.27
TM4SF1-203ENST00000493298 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.33□□□□□ -0.28
TM4SF1-203ENST00000493298 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
TM4SF1-203ENST00000493298 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
TM4SF1-203ENST00000493298 TOM1O60784 492 aa13.32□□□□□ -0.28
TM4SF1-203ENST00000493298 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
TM4SF1-203ENST00000493298 CLSPNQ9HAW4 1339 aa13.32□□□□□ -0.28
TM4SF1-203ENST00000493298 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
TM4SF1-203ENST00000493298 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
TM4SF1-203ENST00000493298 NCOA3Q9Y6Q9 1424 aa13.31□□□□□ -0.28
TM4SF1-203ENST00000493298 CHGAP10645 457 aaKnown RBP13.31□□□□□ -0.28
TM4SF1-203ENST00000493298 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
TM4SF1-203ENST00000493298 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
TM4SF1-203ENST00000493298 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
TM4SF1-203ENST00000493298 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
TM4SF1-203ENST00000493298 NRXN1Q9ULB1 1477 aa13.28□□□□□ -0.28
TM4SF1-203ENST00000493298 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
TM4SF1-203ENST00000493298 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
TM4SF1-203ENST00000493298 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
TM4SF1-203ENST00000493298 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
TM4SF1-203ENST00000493298 LAMC1P11047 1609 aa13.26□□□□□ -0.29
TM4SF1-203ENST00000493298 NHSL1Q5SYE7 1610 aa13.26□□□□□ -0.29
TM4SF1-203ENST00000493298 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
TM4SF1-203ENST00000493298 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 PTCH1Q13635 1447 aa13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
TM4SF1-203ENST00000493298 DCCP43146 1447 aa13.24□□□□□ -0.29
TM4SF1-203ENST00000493298 MSH6P52701 1360 aa13.23□□□□□ -0.29
TM4SF1-203ENST00000493298 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
TM4SF1-203ENST00000493298 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
TM4SF1-203ENST00000493298 NEUROD1Q13562 356 aa13.23□□□□□ -0.29
TM4SF1-203ENST00000493298 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
TM4SF1-203ENST00000493298 TECPR2O15040 1411 aa13.22□□□□□ -0.29
TM4SF1-203ENST00000493298 MST1RQ04912 1400 aa13.22□□□□□ -0.29
TM4SF1-203ENST00000493298 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
TM4SF1-203ENST00000493298 MYOM2P54296 1465 aa13.22□□□□□ -0.29
TM4SF1-203ENST00000493298 DISP3Q9P2K9 1392 aa13.21□□□□□ -0.29
TM4SF1-203ENST00000493298 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
TM4SF1-203ENST00000493298 BCANQ96GW7 911 aa13.21□□□□□ -0.29
TM4SF1-203ENST00000493298 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
TM4SF1-203ENST00000493298 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
TM4SF1-203ENST00000493298 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
TM4SF1-203ENST00000493298 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
TM4SF1-203ENST00000493298 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
TM4SF1-203ENST00000493298 ADGRB1O14514 1584 aa13.19□□□□□ -0.3
TM4SF1-203ENST00000493298 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
TM4SF1-203ENST00000493298 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
TM4SF1-203ENST00000493298 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
TM4SF1-203ENST00000493298 RGS17Q9UGC6 210 aaPredicted RBP13.16□□□□□ -0.3
TM4SF1-203ENST00000493298 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
TM4SF1-203ENST00000493298 LRP6O75581 1613 aa13.15□□□□□ -0.3
TM4SF1-203ENST00000493298 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
TM4SF1-203ENST00000493298 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
TM4SF1-203ENST00000493298 BRINP3Q76B58 766 aa13.14□□□□□ -0.31
TM4SF1-203ENST00000493298 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
TM4SF1-203ENST00000493298 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms