RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 SLC26A8Q96RN1 970 aa31.19■■■□□ 2.58
CLTA-208ENST00000493185 RIMS2Q9UQ26 1411 aa31.18■■■□□ 2.58
CLTA-208ENST00000493185 ALKQ9UM73 1620 aa31.17■■■□□ 2.58
CLTA-208ENST00000493185 PPP1R15AO75807 674 aaPredicted RBP31.17■■■□□ 2.58
CLTA-208ENST00000493185 KCNA6P17658 529 aa31.14■■■□□ 2.58
CLTA-208ENST00000493185 HSPA1LP34931 641 aa31.14■■■□□ 2.58
CLTA-208ENST00000493185 XIRP1Q702N8 1843 aaKnown RBP31.14■■■□□ 2.58
CLTA-208ENST00000493185 PLEKHG1Q9ULL1 1385 aa31.14■■■□□ 2.58
CLTA-208ENST00000493185 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.12■■■□□ 2.57
CLTA-208ENST00000493185 NAIPQ13075 1403 aa31.12■■■□□ 2.57
CLTA-208ENST00000493185 SPHKAPQ2M3C7 1700 aa31.11■■■□□ 2.57
CLTA-208ENST00000493185 SENP3Q9H4L4 574 aaPredicted RBP31.08■■■□□ 2.57
CLTA-208ENST00000493185 NWD1Q149M9 1564 aa31.08■■■□□ 2.57
CLTA-208ENST00000493185 NKTRP30414 1462 aaKnown RBP31.07■■■□□ 2.56
CLTA-208ENST00000493185 TMEM94Q12767 1356 aa31.05■■■□□ 2.56
CLTA-208ENST00000493185 PROSER2Q86WR7 435 aaPredicted RBP31.05■■■□□ 2.56
CLTA-208ENST00000493185 HFM1A2PYH4 1435 aa31.04■■■□□ 2.56
CLTA-208ENST00000493185 CHD2O14647 1828 aaKnown RBP31.01■■■□□ 2.56
CLTA-208ENST00000493185 NUTM2DQ5VT03 806 aaPredicted RBP31.01■■■□□ 2.55
CLTA-208ENST00000493185 TBX22Q9Y458 520 aa31■■■□□ 2.55
CLTA-208ENST00000493185 DIP2AQ14689 1571 aa30.98■■■□□ 2.55
CLTA-208ENST00000493185 TRIM52Q96A61 297 aa30.98■■■□□ 2.55
CLTA-208ENST00000493185 RBM33Q96EV2 1170 aaKnown RBP30.96■■■□□ 2.55
CLTA-208ENST00000493185 TRPM2O94759 1503 aa30.95■■■□□ 2.55
CLTA-208ENST00000493185 ILDR2Q71H61 639 aa30.95■■■□□ 2.55
CLTA-208ENST00000493185 ADAMTS13Q76LX8 1427 aa30.95■■■□□ 2.54
CLTA-208ENST00000493185 ZNF326Q5BKZ1 582 aaKnown RBP30.93■■■□□ 2.54
CLTA-208ENST00000493185 CLTCL1P53675 1640 aa30.93■■■□□ 2.54
CLTA-208ENST00000493185 MSH6P52701 1360 aa30.92■■■□□ 2.54
CLTA-208ENST00000493185 MED1Q15648 1581 aaPredicted RBP30.92■■■□□ 2.54
CLTA-208ENST00000493185 PIK3R4Q99570 1358 aa30.92■■■□□ 2.54
CLTA-208ENST00000493185 FAM135BQ49AJ0 1406 aa30.9■■■□□ 2.54
CLTA-208ENST00000493185 KIF1BO60333 1816 aa30.89■■■□□ 2.54
CLTA-208ENST00000493185 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
CLTA-208ENST00000493185 SETBP1Q9Y6X0 1596 aa30.84■■■□□ 2.53
CLTA-208ENST00000493185 NCOA3Q9Y6Q9 1424 aa30.84■■■□□ 2.53
CLTA-208ENST00000493185 ROBO1Q9Y6N7 1651 aa30.83■■■□□ 2.53
CLTA-208ENST00000493185 NRXN3Q9Y4C0 1643 aa30.82■■■□□ 2.52
CLTA-208ENST00000493185 C14orf37Q86TY3 774 aa30.81■■■□□ 2.52
CLTA-208ENST00000493185 NEXMIFQ5QGS0 1516 aa30.81■■■□□ 2.52
CLTA-208ENST00000493185 AMOTL2Q9Y2J4 779 aa30.79■■■□□ 2.52
CLTA-208ENST00000493185 SLAIN2Q9P270 581 aa30.77■■■□□ 2.52
CLTA-208ENST00000493185 PTPRUQ92729 1446 aa30.76■■■□□ 2.51
CLTA-208ENST00000493185 SOCS7O14512 581 aa30.75■■■□□ 2.51
CLTA-208ENST00000493185 PHF23Q9BUL5 403 aaPredicted RBP30.74■■■□□ 2.51
CLTA-208ENST00000493185 XRN1Q8IZH2 1706 aaKnown RBP30.73■■■□□ 2.51
CLTA-208ENST00000493185 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.73■■■□□ 2.51
CLTA-208ENST00000493185 C19orf44Q9H6X5 657 aa30.72■■■□□ 2.51
CLTA-208ENST00000493185 CADPS2Q86UW7 1296 aa30.71■■■□□ 2.51
CLTA-208ENST00000493185 ATF3P18847 181 aa30.7■■■□□ 2.51
CLTA-208ENST00000493185 METP08581 1390 aa30.69■■■□□ 2.5
CLTA-208ENST00000493185 VGFO15240 615 aaPredicted RBP30.69■■■□□ 2.5
CLTA-208ENST00000493185 RPGRIP1LQ68CZ1 1315 aa30.69■■■□□ 2.5
CLTA-208ENST00000493185 FOXD1Q16676 465 aa30.68■■■□□ 2.5
CLTA-208ENST00000493185 MPHOSPH9Q99550 1183 aa30.66■■■□□ 2.5
CLTA-208ENST00000493185 PHLPP1O60346 1717 aa30.66■■■□□ 2.5
CLTA-208ENST00000493185 ACIN1Q9UKV3 1341 aaKnown RBP30.66■■■□□ 2.5
CLTA-208ENST00000493185 PPLO60437 1756 aa30.64■■■□□ 2.49
CLTA-208ENST00000493185 CCDC144AA2RUR9 1427 aa30.64■■■□□ 2.49
CLTA-208ENST00000493185 DCCP43146 1447 aa30.62■■■□□ 2.49
CLTA-208ENST00000493185 SETD5Q9C0A6 1442 aa30.61■■■□□ 2.49
CLTA-208ENST00000493185 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
CLTA-208ENST00000493185 COL16A1Q07092 1604 aaPredicted RBP30.55■■■□□ 2.48
CLTA-208ENST00000493185 ADGRL3Q9HAR2 1447 aa30.54■■■□□ 2.48
CLTA-208ENST00000493185 JCADQ9P266 1359 aa30.54■■■□□ 2.48
CLTA-208ENST00000493185 AHDC1Q5TGY3 1603 aaPredicted RBP30.52■■■□□ 2.48
CLTA-208ENST00000493185 RGL3Q3MIN7 710 aa30.52■■■□□ 2.48
CLTA-208ENST00000493185 PTCH1Q13635 1447 aa30.52■■■□□ 2.48
CLTA-208ENST00000493185 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
CLTA-208ENST00000493185 NALCNQ8IZF0 1738 aa30.5■■■□□ 2.47
CLTA-208ENST00000493185 BRINP3Q76B58 766 aa30.49■■■□□ 2.47
CLTA-208ENST00000493185 RAB3GAP2Q9H2M9 1393 aa30.49■■■□□ 2.47
CLTA-208ENST00000493185 MST1RQ04912 1400 aa30.48■■■□□ 2.47
CLTA-208ENST00000493185 ANKRD30BQ9BXX2 1392 aa30.48■■■□□ 2.47
CLTA-208ENST00000493185 IFT172Q9UG01 1749 aa30.47■■■□□ 2.47
CLTA-208ENST00000493185 PRAG1Q86YV5 1406 aa30.46■■■□□ 2.47
CLTA-208ENST00000493185 ROBO2Q9HCK4 1378 aa30.45■■■□□ 2.47
CLTA-208ENST00000493185 ASXL1Q8IXJ9 1541 aa30.45■■■□□ 2.47
CLTA-208ENST00000493185 ADGRF5Q8IZF2 1346 aa30.45■■■□□ 2.46
CLTA-208ENST00000493185 RGS17Q9UGC6 210 aaPredicted RBP30.44■■■□□ 2.46
CLTA-208ENST00000493185 SPATA31A6Q5VVP1 1343 aa30.4■■■□□ 2.46
CLTA-208ENST00000493185 SHPRHQ149N8 1683 aa30.39■■■□□ 2.46
CLTA-208ENST00000493185 NHSL1Q5SYE7 1610 aa30.38■■■□□ 2.45
CLTA-208ENST00000493185 PIK3C2GO75747 1445 aa30.35■■■□□ 2.45
CLTA-208ENST00000493185 C1orf167Q5SNV9 1468 aa30.34■■■□□ 2.45
CLTA-208ENST00000493185 LRPPRCP42704 1394 aaKnown RBP30.31■■■□□ 2.44
CLTA-208ENST00000493185 MEX3CQ5U5Q3 659 aaKnown RBP30.31■■■□□ 2.44
CLTA-208ENST00000493185 STK26Q9P289 416 aa30.31■■■□□ 2.44
CLTA-208ENST00000493185 TECPR2O15040 1411 aa30.3■■■□□ 2.44
CLTA-208ENST00000493185 LRP6O75581 1613 aa30.3■■■□□ 2.44
CLTA-208ENST00000493185 POTEAQ6S8J7 498 aa30.29■■■□□ 2.44
CLTA-208ENST00000493185 KNDC1Q76NI1 1749 aa30.29■■■□□ 2.44
CLTA-208ENST00000493185 MYOM2P54296 1465 aa30.28■■■□□ 2.44
CLTA-208ENST00000493185 LRRC59Q96AG4 307 aaKnown RBP30.28■■■□□ 2.44
CLTA-208ENST00000493185 HRCP23327 699 aa30.27■■■□□ 2.44
CLTA-208ENST00000493185 TMEM132EQ6IEE7 984 aa30.27■■■□□ 2.44
CLTA-208ENST00000493185 ABCC11Q96J66 1382 aa30.27■■■□□ 2.44
CLTA-208ENST00000493185 CDC42BPGQ6DT37 1551 aa30.26■■■□□ 2.43
CLTA-208ENST00000493185 DDX17Q92841 729 aaKnown RBP30.26■■■□□ 2.43
CLTA-208ENST00000493185 LAMC1P11047 1609 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms