RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 SYNMO15061 1565 aa19.12■□□□□ 0.65
PABPC4-216ENST00000492468 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
PABPC4-216ENST00000492468 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
PABPC4-216ENST00000492468 IFT140Q96RY7 1462 aa19.11■□□□□ 0.65
PABPC4-216ENST00000492468 BECN1Q14457 450 aa19.1■□□□□ 0.65
PABPC4-216ENST00000492468 IQGAP1P46940 1657 aa19.1■□□□□ 0.65
PABPC4-216ENST00000492468 PLXNC1O60486 1568 aa19.09■□□□□ 0.65
PABPC4-216ENST00000492468 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
PABPC4-216ENST00000492468 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
PABPC4-216ENST00000492468 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
PABPC4-216ENST00000492468 ANTXR1Q9H6X2 564 aa19.09■□□□□ 0.65
PABPC4-216ENST00000492468 IGHDP01880 384 aa19.08■□□□□ 0.65
PABPC4-216ENST00000492468 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
PABPC4-216ENST00000492468 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
PABPC4-216ENST00000492468 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.64
PABPC4-216ENST00000492468 SEC24BO95487 1268 aa19.07■□□□□ 0.64
PABPC4-216ENST00000492468 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
PABPC4-216ENST00000492468 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
PABPC4-216ENST00000492468 ATP10AO60312 1499 aa19.06■□□□□ 0.64
PABPC4-216ENST00000492468 MYOM1P52179 1685 aa19.06■□□□□ 0.64
PABPC4-216ENST00000492468 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
PABPC4-216ENST00000492468 CGNL1Q0VF96 1302 aa19.05■□□□□ 0.64
PABPC4-216ENST00000492468 BCAR3O75815 825 aa19.05■□□□□ 0.64
PABPC4-216ENST00000492468 MAST1Q9Y2H9 1570 aa19.05■□□□□ 0.64
PABPC4-216ENST00000492468 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
PABPC4-216ENST00000492468 PLEKHD1A6NEE1 506 aa19.04■□□□□ 0.64
PABPC4-216ENST00000492468 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.641e-6■□□□□ 10.4
PABPC4-216ENST00000492468 ATP10BO94823 1461 aa19.04■□□□□ 0.64
PABPC4-216ENST00000492468 CDC42BPBQ9Y5S2 1711 aa19.04■□□□□ 0.64
PABPC4-216ENST00000492468 SLKQ9H2G2 1235 aaPredicted RBP19.04■□□□□ 0.64
PABPC4-216ENST00000492468 ZMYM3Q14202 1370 aa19.04■□□□□ 0.64
PABPC4-216ENST00000492468 PDE3AQ14432 1141 aa19.03■□□□□ 0.64
PABPC4-216ENST00000492468 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
PABPC4-216ENST00000492468 MADDQ8WXG6 1647 aa19.02■□□□□ 0.64
PABPC4-216ENST00000492468 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.64
PABPC4-216ENST00000492468 E9PSI1 815 aa19.01■□□□□ 0.63
PABPC4-216ENST00000492468 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
PABPC4-216ENST00000492468 FSD2A1L4K1 749 aa19■□□□□ 0.63
PABPC4-216ENST00000492468 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
PABPC4-216ENST00000492468 TBC1D32Q96NH3 1257 aa18.98■□□□□ 0.63
PABPC4-216ENST00000492468 APAF1O14727 1248 aa18.98■□□□□ 0.63
PABPC4-216ENST00000492468 XRCC6P12956 609 aaKnown RBP eCLIP18.98■□□□□ 0.631e-9■□□□□ 8
PABPC4-216ENST00000492468 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
PABPC4-216ENST00000492468 TBC1D2Q9BYX2 928 aa18.96■□□□□ 0.63
PABPC4-216ENST00000492468 CLCN1P35523 988 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 RSPH4AQ5TD94 716 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 GOLGA6L3A6NEY3 463 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
PABPC4-216ENST00000492468 CENPJQ9HC77 1338 aaPredicted RBP18.94■□□□□ 0.62
PABPC4-216ENST00000492468 CDCA8Q53HL2 280 aa18.94■□□□□ 0.62
PABPC4-216ENST00000492468 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
PABPC4-216ENST00000492468 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
PABPC4-216ENST00000492468 COG6Q9Y2V7 657 aa18.93■□□□□ 0.62
PABPC4-216ENST00000492468 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
PABPC4-216ENST00000492468 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
PABPC4-216ENST00000492468 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
PABPC4-216ENST00000492468 CEP152O94986 1710 aa18.92■□□□□ 0.62
PABPC4-216ENST00000492468 DUOX2Q9NRD8 1548 aa18.92■□□□□ 0.62
PABPC4-216ENST00000492468 MCM4P33991 863 aa18.91■□□□□ 0.62
PABPC4-216ENST00000492468 AAMPQ13685 434 aa18.91■□□□□ 0.62
PABPC4-216ENST00000492468 PMFBP1Q8TBY8 1022 aa18.91■□□□□ 0.62
PABPC4-216ENST00000492468 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
PABPC4-216ENST00000492468 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
PABPC4-216ENST00000492468 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
PABPC4-216ENST00000492468 PANK2Q9BZ23 570 aa18.9■□□□□ 0.62
PABPC4-216ENST00000492468 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.61
PABPC4-216ENST00000492468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.613e-6■■□□□ 12.4
PABPC4-216ENST00000492468 CANXP27824 592 aaKnown RBP18.88■□□□□ 0.61
PABPC4-216ENST00000492468 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
PABPC4-216ENST00000492468 NAP1L5Q96NT1 182 aaPredicted RBP18.88■□□□□ 0.61
PABPC4-216ENST00000492468 PKNOX2Q96KN3 472 aa18.87■□□□□ 0.61
PABPC4-216ENST00000492468 SHPRHQ149N8 1683 aa18.86■□□□□ 0.61
PABPC4-216ENST00000492468 PDZRN3Q9UPQ7 1066 aa18.86■□□□□ 0.61
PABPC4-216ENST00000492468 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
PABPC4-216ENST00000492468 KIAA1210Q9ULL0 1709 aa18.85■□□□□ 0.61
PABPC4-216ENST00000492468 WWC1Q8IX03 1113 aa18.85■□□□□ 0.61
PABPC4-216ENST00000492468 MRE11P49959 708 aa18.84■□□□□ 0.61
PABPC4-216ENST00000492468 ARXQ96QS3 562 aa18.84■□□□□ 0.61
PABPC4-216ENST00000492468 CHMP5Q9NZZ3 219 aa18.84■□□□□ 0.61
PABPC4-216ENST00000492468 RRP9O43818 475 aaKnown RBP18.84■□□□□ 0.61
PABPC4-216ENST00000492468 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
PABPC4-216ENST00000492468 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.61
PABPC4-216ENST00000492468 POLR3AO14802 1390 aaPredicted RBP18.83■□□□□ 0.6
PABPC4-216ENST00000492468 TRPM2O94759 1503 aa18.83■□□□□ 0.6
PABPC4-216ENST00000492468 TRAK2O60296 914 aa18.83■□□□□ 0.6
PABPC4-216ENST00000492468 RARSP54136 660 aaKnown RBP18.83■□□□□ 0.6
PABPC4-216ENST00000492468 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-216ENST00000492468 ARHGAP5Q13017 1502 aa18.82■□□□□ 0.6
PABPC4-216ENST00000492468 RLBP1P12271 317 aa18.81■□□□□ 0.6
PABPC4-216ENST00000492468 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
PABPC4-216ENST00000492468 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
PABPC4-216ENST00000492468 ISY1Q9ULR0 285 aaKnown RBP18.81■□□□□ 0.6
PABPC4-216ENST00000492468 HSP90AA2PQ14568 343 aaPredicted RBP18.8■□□□□ 0.6
PABPC4-216ENST00000492468 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
PABPC4-216ENST00000492468 ERVK-7P63135 1459 aa18.79■□□□□ 0.6
PABPC4-216ENST00000492468 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-216ENST00000492468 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-216ENST00000492468 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms