RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 GCC2Q8IWJ2 1684 aa22.35■■□□□ 1.17
SS18L1-205ENST00000492466 E9PCH4 1651 aa22.33■■□□□ 1.17
SS18L1-205ENST00000492466 ITGAEP38570 1179 aa22.32■■□□□ 1.16
SS18L1-205ENST00000492466 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
SS18L1-205ENST00000492466 NWD1Q149M9 1564 aa22.32■■□□□ 1.16
SS18L1-205ENST00000492466 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
SS18L1-205ENST00000492466 IQGAP3Q86VI3 1631 aa22.31■■□□□ 1.16
SS18L1-205ENST00000492466 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
SS18L1-205ENST00000492466 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
SS18L1-205ENST00000492466 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
SS18L1-205ENST00000492466 PROSER2Q86WR7 435 aaPredicted RBP22.29■■□□□ 1.16
SS18L1-205ENST00000492466 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
SS18L1-205ENST00000492466 NUP155O75694 1391 aa22.26■■□□□ 1.15
SS18L1-205ENST00000492466 RRBP1Q9P2E9 1410 aaKnown RBP22.26■■□□□ 1.15
SS18L1-205ENST00000492466 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
SS18L1-205ENST00000492466 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
SS18L1-205ENST00000492466 BCANQ96GW7 911 aa22.24■■□□□ 1.15
SS18L1-205ENST00000492466 TBX22Q9Y458 520 aa22.24■■□□□ 1.15
SS18L1-205ENST00000492466 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
SS18L1-205ENST00000492466 PPP1R15AO75807 674 aaPredicted RBP22.21■■□□□ 1.15
SS18L1-205ENST00000492466 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
SS18L1-205ENST00000492466 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
SS18L1-205ENST00000492466 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
SS18L1-205ENST00000492466 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.14
SS18L1-205ENST00000492466 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
SS18L1-205ENST00000492466 RGS17Q9UGC6 210 aaPredicted RBP22.18■■□□□ 1.14
SS18L1-205ENST00000492466 MSH6P52701 1360 aa22.17■■□□□ 1.14
SS18L1-205ENST00000492466 SLAIN2Q9P270 581 aa22.16■■□□□ 1.14
SS18L1-205ENST00000492466 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
SS18L1-205ENST00000492466 PIK3R4Q99570 1358 aa22.14■■□□□ 1.14
SS18L1-205ENST00000492466 DIP2AQ14689 1571 aa22.13■■□□□ 1.13
SS18L1-205ENST00000492466 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
SS18L1-205ENST00000492466 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
SS18L1-205ENST00000492466 NAIPQ13075 1403 aa22.11■■□□□ 1.13
SS18L1-205ENST00000492466 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
SS18L1-205ENST00000492466 AMOTL2Q9Y2J4 779 aa22.07■■□□□ 1.12
SS18L1-205ENST00000492466 TRPM2O94759 1503 aa22.06■■□□□ 1.12
SS18L1-205ENST00000492466 C19orf44Q9H6X5 657 aa22.06■■□□□ 1.12
SS18L1-205ENST00000492466 SETBP1Q9Y6X0 1596 aa22.06■■□□□ 1.12
SS18L1-205ENST00000492466 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
SS18L1-205ENST00000492466 CLTCL1P53675 1640 aa22.04■■□□□ 1.12
SS18L1-205ENST00000492466 PHLPP1O60346 1717 aa22.03■■□□□ 1.12
SS18L1-205ENST00000492466 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.12
SS18L1-205ENST00000492466 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
SS18L1-205ENST00000492466 XRN1Q8IZH2 1706 aaKnown RBP22.02■■□□□ 1.12
SS18L1-205ENST00000492466 METP08581 1390 aa22.01■■□□□ 1.11
SS18L1-205ENST00000492466 POTEAQ6S8J7 498 aa22.01■■□□□ 1.11
SS18L1-205ENST00000492466 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
SS18L1-205ENST00000492466 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
SS18L1-205ENST00000492466 JCADQ9P266 1359 aa22■■□□□ 1.11
SS18L1-205ENST00000492466 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
SS18L1-205ENST00000492466 HFM1A2PYH4 1435 aa21.99■■□□□ 1.11
SS18L1-205ENST00000492466 ATF3P18847 181 aa21.98■■□□□ 1.11
SS18L1-205ENST00000492466 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
SS18L1-205ENST00000492466 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
SS18L1-205ENST00000492466 DCCP43146 1447 aa21.95■■□□□ 1.1
SS18L1-205ENST00000492466 KIF1BO60333 1816 aa21.93■■□□□ 1.1
SS18L1-205ENST00000492466 LRP6O75581 1613 aa21.92■■□□□ 1.1
SS18L1-205ENST00000492466 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
SS18L1-205ENST00000492466 MST1RQ04912 1400 aa21.91■■□□□ 1.1
SS18L1-205ENST00000492466 SPATA31A6Q5VVP1 1343 aa21.89■■□□□ 1.1
SS18L1-205ENST00000492466 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
SS18L1-205ENST00000492466 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.09
SS18L1-205ENST00000492466 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
SS18L1-205ENST00000492466 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
SS18L1-205ENST00000492466 ASXL1Q8IXJ9 1541 aa21.87■■□□□ 1.09
SS18L1-205ENST00000492466 VGFO15240 615 aaPredicted RBP21.86■■□□□ 1.09
SS18L1-205ENST00000492466 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
SS18L1-205ENST00000492466 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
SS18L1-205ENST00000492466 FOXD1Q16676 465 aa21.84■■□□□ 1.09
SS18L1-205ENST00000492466 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
SS18L1-205ENST00000492466 PRAG1Q86YV5 1406 aa21.83■■□□□ 1.09
SS18L1-205ENST00000492466 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.09
SS18L1-205ENST00000492466 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.08
SS18L1-205ENST00000492466 PTCH1Q13635 1447 aa21.82■■□□□ 1.08
SS18L1-205ENST00000492466 PPLO60437 1756 aa21.82■■□□□ 1.08
SS18L1-205ENST00000492466 DDX17Q92841 729 aaKnown RBP21.8■■□□□ 1.08
SS18L1-205ENST00000492466 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
SS18L1-205ENST00000492466 SPATA31E1Q6ZUB1 1445 aa21.77■■□□□ 1.08
SS18L1-205ENST00000492466 MEX3CQ5U5Q3 659 aaKnown RBP21.76■■□□□ 1.07
SS18L1-205ENST00000492466 LRRC59Q96AG4 307 aaKnown RBP21.76■■□□□ 1.07
SS18L1-205ENST00000492466 MPHOSPH9Q99550 1183 aa21.76■■□□□ 1.07
SS18L1-205ENST00000492466 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
SS18L1-205ENST00000492466 ZNF772Q68DY9 489 aaPredicted RBP21.75■■□□□ 1.07
SS18L1-205ENST00000492466 LAMC1P11047 1609 aa21.74■■□□□ 1.07
SS18L1-205ENST00000492466 NUTM2BA6NNL0 878 aaPredicted RBP21.74■■□□□ 1.07
SS18L1-205ENST00000492466 NUTM2EB1AL46 878 aaPredicted RBP21.74■■□□□ 1.07
SS18L1-205ENST00000492466 NUTM2AQ8IVF1 878 aaPredicted RBP21.74■■□□□ 1.07
SS18L1-205ENST00000492466 ORAI2Q96SN7 254 aa21.73■■□□□ 1.07
SS18L1-205ENST00000492466 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
SS18L1-205ENST00000492466 RAB3GAP2Q9H2M9 1393 aa21.73■■□□□ 1.07
SS18L1-205ENST00000492466 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
SS18L1-205ENST00000492466 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
SS18L1-205ENST00000492466 RGL3Q3MIN7 710 aa21.7■■□□□ 1.06
SS18L1-205ENST00000492466 SOS2Q07890 1332 aaPredicted RBP21.7■■□□□ 1.06
SS18L1-205ENST00000492466 IFT172Q9UG01 1749 aa21.69■■□□□ 1.06
SS18L1-205ENST00000492466 AFF2P51816 1311 aa21.68■■□□□ 1.06
SS18L1-205ENST00000492466 ANKRD30BQ9BXX2 1392 aa21.67■■□□□ 1.06
SS18L1-205ENST00000492466 TECPR2O15040 1411 aa21.66■■□□□ 1.06
SS18L1-205ENST00000492466 PIK3C2GO75747 1445 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms