RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 RGL3Q3MIN7 710 aa21.36■■□□□ 1.01
COPS7B-222ENST00000492423 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
COPS7B-222ENST00000492423 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
COPS7B-222ENST00000492423 MYOM2P54296 1465 aa21.35■■□□□ 1.01
COPS7B-222ENST00000492423 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
COPS7B-222ENST00000492423 UBR1Q8IWV7 1749 aa21.35■■□□□ 1.01
COPS7B-222ENST00000492423 TNRQ92752 1358 aa21.35■■□□□ 1.01
COPS7B-222ENST00000492423 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
COPS7B-222ENST00000492423 IDI1Q13907 227 aa21.34■■□□□ 1.01
COPS7B-222ENST00000492423 DCAF11Q8TEB1 546 aa21.33■■□□□ 1.01
COPS7B-222ENST00000492423 RALGAPBQ86X10 1494 aa21.32■■□□□ 1
COPS7B-222ENST00000492423 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
COPS7B-222ENST00000492423 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
COPS7B-222ENST00000492423 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
COPS7B-222ENST00000492423 A2ML1A8K2U0 1454 aa21.29■■□□□ 1
COPS7B-222ENST00000492423 NLRP1Q9C000 1473 aa21.29■■□□□ 1
COPS7B-222ENST00000492423 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
COPS7B-222ENST00000492423 CHGAP10645 457 aaKnown RBP21.28■■□□□ 1
COPS7B-222ENST00000492423 LAMC1P11047 1609 aa21.28■■□□□ 1
COPS7B-222ENST00000492423 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
COPS7B-222ENST00000492423 C1QBPQ07021 282 aaKnown RBP21.25■□□□□ 0.99
COPS7B-222ENST00000492423 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
COPS7B-222ENST00000492423 PTPRMP28827 1452 aa21.25■□□□□ 0.99
COPS7B-222ENST00000492423 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
COPS7B-222ENST00000492423 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
COPS7B-222ENST00000492423 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
COPS7B-222ENST00000492423 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
COPS7B-222ENST00000492423 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
COPS7B-222ENST00000492423 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
COPS7B-222ENST00000492423 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
COPS7B-222ENST00000492423 ADGRF5Q8IZF2 1346 aa21.2■□□□□ 0.98
COPS7B-222ENST00000492423 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
COPS7B-222ENST00000492423 RIMS2Q9UQ26 1411 aa21.18■□□□□ 0.98
COPS7B-222ENST00000492423 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
COPS7B-222ENST00000492423 SETBP1Q9Y6X0 1596 aa21.16■□□□□ 0.98
COPS7B-222ENST00000492423 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
COPS7B-222ENST00000492423 SLIT1O75093 1534 aa21.15■□□□□ 0.98
COPS7B-222ENST00000492423 STAG3Q9UJ98 1225 aa21.15■□□□□ 0.98
COPS7B-222ENST00000492423 ARHGAP23Q9P227 1491 aa21.14■□□□□ 0.98
COPS7B-222ENST00000492423 ROCK2O75116 1388 aaKnown RBP21.14■□□□□ 0.98
COPS7B-222ENST00000492423 ZNF316A6NFI3 1004 aaPredicted RBP21.14■□□□□ 0.97
COPS7B-222ENST00000492423 POLR1AO95602 1720 aaPredicted RBP21.13■□□□□ 0.97
COPS7B-222ENST00000492423 ADGRB1O14514 1584 aa21.12■□□□□ 0.97
COPS7B-222ENST00000492423 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
COPS7B-222ENST00000492423 ASXL1Q8IXJ9 1541 aa21.12■□□□□ 0.97
COPS7B-222ENST00000492423 TMEM2Q9UHN6 1383 aa21.11■□□□□ 0.97
COPS7B-222ENST00000492423 VGFO15240 615 aaPredicted RBP21.11■□□□□ 0.97
COPS7B-222ENST00000492423 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
COPS7B-222ENST00000492423 USP47Q96K76 1375 aa21.1■□□□□ 0.97
COPS7B-222ENST00000492423 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
COPS7B-222ENST00000492423 HSPA5P11021 654 aaKnown RBP21.09■□□□□ 0.97
COPS7B-222ENST00000492423 CARD11Q9BXL7 1154 aa21.08■□□□□ 0.97
COPS7B-222ENST00000492423 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
COPS7B-222ENST00000492423 CFAP70Q5T0N1 1121 aa21.07■□□□□ 0.96
COPS7B-222ENST00000492423 C14orf93Q9H972 538 aaKnown RBP21.06■□□□□ 0.96
COPS7B-222ENST00000492423 ARHGEF28Q8N1W1 1705 aaKnown RBP21.05■□□□□ 0.96
COPS7B-222ENST00000492423 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
COPS7B-222ENST00000492423 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
COPS7B-222ENST00000492423 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
COPS7B-222ENST00000492423 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
COPS7B-222ENST00000492423 PLEKHG1Q9ULL1 1385 aa21■□□□□ 0.95
COPS7B-222ENST00000492423 ILDR1Q86SU0 546 aaPredicted RBP21■□□□□ 0.95
COPS7B-222ENST00000492423 THEMISQ8N1K5 641 aaPredicted RBP21■□□□□ 0.95
COPS7B-222ENST00000492423 KNDC1Q76NI1 1749 aa20.99■□□□□ 0.95
COPS7B-222ENST00000492423 LTKP29376 864 aa20.99■□□□□ 0.95
COPS7B-222ENST00000492423 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
COPS7B-222ENST00000492423 HDGFP51858 240 aaKnown RBP20.98■□□□□ 0.95
COPS7B-222ENST00000492423 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
COPS7B-222ENST00000492423 MED14O60244 1454 aa20.97■□□□□ 0.95
COPS7B-222ENST00000492423 DIP2AQ14689 1571 aa20.97■□□□□ 0.95
COPS7B-222ENST00000492423 TXNDC2Q86VQ3 553 aa20.95■□□□□ 0.94
COPS7B-222ENST00000492423 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
COPS7B-222ENST00000492423 TMEM132EQ6IEE7 984 aa20.94■□□□□ 0.94
COPS7B-222ENST00000492423 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
COPS7B-222ENST00000492423 EIF3AQ14152 1382 aaKnown RBP20.93■□□□□ 0.94
COPS7B-222ENST00000492423 YTHDC2Q9H6S0 1430 aaKnown RBP20.93■□□□□ 0.94
COPS7B-222ENST00000492423 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
COPS7B-222ENST00000492423 CPS1P31327 1500 aa20.9■□□□□ 0.94
COPS7B-222ENST00000492423 LMTK3Q96Q04 1460 aa20.9■□□□□ 0.94
COPS7B-222ENST00000492423 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
COPS7B-222ENST00000492423 METP08581 1390 aa20.89■□□□□ 0.93
COPS7B-222ENST00000492423 CCDC7Q96M83 1385 aa20.89■□□□□ 0.93
COPS7B-222ENST00000492423 TESK2Q96S53 571 aa20.89■□□□□ 0.93
COPS7B-222ENST00000492423 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
COPS7B-222ENST00000492423 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
COPS7B-222ENST00000492423 XRN1Q8IZH2 1706 aaKnown RBP20.88■□□□□ 0.93
COPS7B-222ENST00000492423 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
COPS7B-222ENST00000492423 TECPR2O15040 1411 aa20.86■□□□□ 0.93
COPS7B-222ENST00000492423 SBNO2Q9Y2G9 1366 aa20.85■□□□□ 0.93
COPS7B-222ENST00000492423 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
COPS7B-222ENST00000492423 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
COPS7B-222ENST00000492423 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
COPS7B-222ENST00000492423 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
COPS7B-222ENST00000492423 NPHP4O75161 1426 aaPredicted RBP20.84■□□□□ 0.93
COPS7B-222ENST00000492423 PTPRUQ92729 1446 aa20.84■□□□□ 0.93
COPS7B-222ENST00000492423 ABCC11Q96J66 1382 aa20.83■□□□□ 0.92
COPS7B-222ENST00000492423 MYOM1P52179 1685 aa20.83■□□□□ 0.92
COPS7B-222ENST00000492423 STRCQ7RTU9 1775 aa20.82■□□□□ 0.92
COPS7B-222ENST00000492423 CENPJQ9HC77 1338 aaPredicted RBP20.82■□□□□ 0.92
COPS7B-222ENST00000492423 BCANQ96GW7 911 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms