RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
TREX1-204ENST00000492235 MYO5BQ9ULV0 1848 aa19.47■□□□□ 0.71
TREX1-204ENST00000492235 MSH6P52701 1360 aa19.46■□□□□ 0.71
TREX1-204ENST00000492235 POTEAQ6S8J7 498 aa19.46■□□□□ 0.71
TREX1-204ENST00000492235 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
TREX1-204ENST00000492235 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
TREX1-204ENST00000492235 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
TREX1-204ENST00000492235 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
TREX1-204ENST00000492235 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
TREX1-204ENST00000492235 PHLPP1O60346 1717 aa19.43■□□□□ 0.7
TREX1-204ENST00000492235 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
TREX1-204ENST00000492235 CHD2O14647 1828 aaKnown RBP19.43■□□□□ 0.7
TREX1-204ENST00000492235 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
TREX1-204ENST00000492235 PLEKHG1Q9ULL1 1385 aa19.42■□□□□ 0.7
TREX1-204ENST00000492235 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
TREX1-204ENST00000492235 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
TREX1-204ENST00000492235 CHGAP10645 457 aaKnown RBP19.38■□□□□ 0.69
TREX1-204ENST00000492235 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
TREX1-204ENST00000492235 JCADQ9P266 1359 aa19.36■□□□□ 0.69
TREX1-204ENST00000492235 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
TREX1-204ENST00000492235 UNC13BO14795 1591 aa19.36■□□□□ 0.69
TREX1-204ENST00000492235 NUTM2DQ5VT03 806 aaPredicted RBP19.35■□□□□ 0.69
TREX1-204ENST00000492235 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
TREX1-204ENST00000492235 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
TREX1-204ENST00000492235 E9PCH4 1651 aa19.34■□□□□ 0.69
TREX1-204ENST00000492235 COL16A1Q07092 1604 aaPredicted RBP19.34■□□□□ 0.69
TREX1-204ENST00000492235 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.68
TREX1-204ENST00000492235 ADAMTS13Q76LX8 1427 aa19.32■□□□□ 0.68
TREX1-204ENST00000492235 NCOA3Q9Y6Q9 1424 aa19.31■□□□□ 0.68
TREX1-204ENST00000492235 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.31■□□□□ 0.68
TREX1-204ENST00000492235 DIP2AQ14689 1571 aa19.3■□□□□ 0.68
TREX1-204ENST00000492235 LRP6O75581 1613 aa19.29■□□□□ 0.68
TREX1-204ENST00000492235 IQGAP3Q86VI3 1631 aa19.29■□□□□ 0.68
TREX1-204ENST00000492235 CADPS2Q86UW7 1296 aa19.28■□□□□ 0.68
TREX1-204ENST00000492235 ATF3P18847 181 aa19.27■□□□□ 0.68
TREX1-204ENST00000492235 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
TREX1-204ENST00000492235 C19orf44Q9H6X5 657 aa19.27■□□□□ 0.68
TREX1-204ENST00000492235 PIK3R4Q99570 1358 aa19.26■□□□□ 0.67
TREX1-204ENST00000492235 SPATA31A6Q5VVP1 1343 aa19.25■□□□□ 0.67
TREX1-204ENST00000492235 TRPM2O94759 1503 aa19.25■□□□□ 0.67
TREX1-204ENST00000492235 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
TREX1-204ENST00000492235 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
TREX1-204ENST00000492235 ROCK1Q13464 1354 aa19.24■□□□□ 0.67
TREX1-204ENST00000492235 AMOTL2Q9Y2J4 779 aa19.24■□□□□ 0.67
TREX1-204ENST00000492235 PTPRUQ92729 1446 aa19.24■□□□□ 0.67
TREX1-204ENST00000492235 NUP155O75694 1391 aa19.23■□□□□ 0.67
TREX1-204ENST00000492235 ZNF772Q68DY9 489 aaPredicted RBP19.21■□□□□ 0.67
TREX1-204ENST00000492235 ITGAEP38570 1179 aa19.2■□□□□ 0.66
TREX1-204ENST00000492235 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
TREX1-204ENST00000492235 TRIM52Q96A61 297 aa19.2■□□□□ 0.66
TREX1-204ENST00000492235 NRXN3Q9Y4C0 1643 aa19.19■□□□□ 0.66
TREX1-204ENST00000492235 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
TREX1-204ENST00000492235 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
TREX1-204ENST00000492235 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
TREX1-204ENST00000492235 XRN1Q8IZH2 1706 aaKnown RBP19.17■□□□□ 0.66
TREX1-204ENST00000492235 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
TREX1-204ENST00000492235 DCCP43146 1447 aa19.16■□□□□ 0.66
TREX1-204ENST00000492235 ASXL1Q8IXJ9 1541 aa19.15■□□□□ 0.66
TREX1-204ENST00000492235 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
TREX1-204ENST00000492235 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
TREX1-204ENST00000492235 UPF1Q92900 1129 aaKnown RBP eCLIP19.15■□□□□ 0.66
TREX1-204ENST00000492235 RXRBP28702 533 aa19.13■□□□□ 0.65
TREX1-204ENST00000492235 MST1RQ04912 1400 aa19.13■□□□□ 0.65
TREX1-204ENST00000492235 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
TREX1-204ENST00000492235 METP08581 1390 aa19.12■□□□□ 0.65
TREX1-204ENST00000492235 SETD5Q9C0A6 1442 aa19.11■□□□□ 0.65
TREX1-204ENST00000492235 AFF2P51816 1311 aa19.1■□□□□ 0.65
TREX1-204ENST00000492235 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
TREX1-204ENST00000492235 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
TREX1-204ENST00000492235 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
TREX1-204ENST00000492235 CLTCL1P53675 1640 aa19.08■□□□□ 0.65
TREX1-204ENST00000492235 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
TREX1-204ENST00000492235 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
TREX1-204ENST00000492235 NEXMIFQ5QGS0 1516 aa19.07■□□□□ 0.64
TREX1-204ENST00000492235 CDK12Q9NYV4 1490 aaPredicted RBP19.06■□□□□ 0.64
TREX1-204ENST00000492235 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
TREX1-204ENST00000492235 KIF1BO60333 1816 aa19.04■□□□□ 0.64
TREX1-204ENST00000492235 PNPLA6Q8IY17 1366 aa19.04■□□□□ 0.64
TREX1-204ENST00000492235 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
TREX1-204ENST00000492235 C1orf167Q5SNV9 1468 aa19■□□□□ 0.63
TREX1-204ENST00000492235 RGS12O14924 1447 aa19■□□□□ 0.63
TREX1-204ENST00000492235 ADAMTS2O95450 1211 aa18.99■□□□□ 0.63
TREX1-204ENST00000492235 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
TREX1-204ENST00000492235 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
TREX1-204ENST00000492235 PTCH1Q13635 1447 aa18.97■□□□□ 0.63
TREX1-204ENST00000492235 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
TREX1-204ENST00000492235 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
TREX1-204ENST00000492235 LAMC1P11047 1609 aa18.96■□□□□ 0.63
TREX1-204ENST00000492235 NAIPQ13075 1403 aa18.95■□□□□ 0.62
TREX1-204ENST00000492235 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
TREX1-204ENST00000492235 SOS2Q07890 1332 aaPredicted RBP18.93■□□□□ 0.62
TREX1-204ENST00000492235 USP21Q9UK80 565 aa18.91■□□□□ 0.62
TREX1-204ENST00000492235 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
TREX1-204ENST00000492235 PPLO60437 1756 aa18.9■□□□□ 0.62
TREX1-204ENST00000492235 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
TREX1-204ENST00000492235 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
TREX1-204ENST00000492235 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
TREX1-204ENST00000492235 COL22A1Q8NFW1 1626 aaPredicted RBP18.87■□□□□ 0.61
TREX1-204ENST00000492235 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
TREX1-204ENST00000492235 TRPC5Q9UL62 973 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms