RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
COL6A4P1-203ENST00000491915 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
COL6A4P1-203ENST00000491915 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
COL6A4P1-203ENST00000491915 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
COL6A4P1-203ENST00000491915 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
COL6A4P1-203ENST00000491915 KDM5AP29375 1690 aaKnown RBP13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 HSPA1LP34931 641 aa13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
COL6A4P1-203ENST00000491915 FOXD1Q16676 465 aa13.39□□□□□ -0.27
COL6A4P1-203ENST00000491915 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
COL6A4P1-203ENST00000491915 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
COL6A4P1-203ENST00000491915 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
COL6A4P1-203ENST00000491915 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
COL6A4P1-203ENST00000491915 ZNF326Q5BKZ1 582 aaKnown RBP13.36□□□□□ -0.27
COL6A4P1-203ENST00000491915 MPHOSPH9Q99550 1183 aa13.35□□□□□ -0.27
COL6A4P1-203ENST00000491915 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
COL6A4P1-203ENST00000491915 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
COL6A4P1-203ENST00000491915 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
COL6A4P1-203ENST00000491915 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
COL6A4P1-203ENST00000491915 DISP3Q9P2K9 1392 aa13.31□□□□□ -0.28
COL6A4P1-203ENST00000491915 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
COL6A4P1-203ENST00000491915 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
COL6A4P1-203ENST00000491915 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
COL6A4P1-203ENST00000491915 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
COL6A4P1-203ENST00000491915 CHD2O14647 1828 aaKnown RBP13.28□□□□□ -0.28
COL6A4P1-203ENST00000491915 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
COL6A4P1-203ENST00000491915 METP08581 1390 aa13.28□□□□□ -0.28
COL6A4P1-203ENST00000491915 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
COL6A4P1-203ENST00000491915 TRPM2O94759 1503 aa13.27□□□□□ -0.29
COL6A4P1-203ENST00000491915 VGFO15240 615 aaPredicted RBP13.26□□□□□ -0.29
COL6A4P1-203ENST00000491915 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
COL6A4P1-203ENST00000491915 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
COL6A4P1-203ENST00000491915 NWD1Q149M9 1564 aa13.25□□□□□ -0.29
COL6A4P1-203ENST00000491915 RPGRIP1LQ68CZ1 1315 aa13.25□□□□□ -0.29
COL6A4P1-203ENST00000491915 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
COL6A4P1-203ENST00000491915 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
COL6A4P1-203ENST00000491915 RAB3GAP2Q9H2M9 1393 aa13.24□□□□□ -0.29
COL6A4P1-203ENST00000491915 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
COL6A4P1-203ENST00000491915 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
COL6A4P1-203ENST00000491915 MSH6P52701 1360 aa13.23□□□□□ -0.29
COL6A4P1-203ENST00000491915 ADGRF5Q8IZF2 1346 aa13.23□□□□□ -0.29
COL6A4P1-203ENST00000491915 NRXN3Q9Y4C0 1643 aa13.23□□□□□ -0.29
COL6A4P1-203ENST00000491915 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
COL6A4P1-203ENST00000491915 KIF1BO60333 1816 aa13.21□□□□□ -0.29
COL6A4P1-203ENST00000491915 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
COL6A4P1-203ENST00000491915 ATF3P18847 181 aa13.2□□□□□ -0.3
COL6A4P1-203ENST00000491915 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
COL6A4P1-203ENST00000491915 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
COL6A4P1-203ENST00000491915 HRCP23327 699 aa13.19□□□□□ -0.3
COL6A4P1-203ENST00000491915 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
COL6A4P1-203ENST00000491915 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
COL6A4P1-203ENST00000491915 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
COL6A4P1-203ENST00000491915 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
COL6A4P1-203ENST00000491915 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
COL6A4P1-203ENST00000491915 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
COL6A4P1-203ENST00000491915 STK26Q9P289 416 aa13.15□□□□□ -0.3
COL6A4P1-203ENST00000491915 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
COL6A4P1-203ENST00000491915 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.15□□□□□ -0.3
COL6A4P1-203ENST00000491915 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
COL6A4P1-203ENST00000491915 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.31
COL6A4P1-203ENST00000491915 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 PPLO60437 1756 aa13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
COL6A4P1-203ENST00000491915 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
COL6A4P1-203ENST00000491915 SETD1AO15047 1707 aaKnown RBP13.1□□□□□ -0.31
COL6A4P1-203ENST00000491915 SOCS7O14512 581 aa13.1□□□□□ -0.31
COL6A4P1-203ENST00000491915 PHF23Q9BUL5 403 aaPredicted RBP13.1□□□□□ -0.31
COL6A4P1-203ENST00000491915 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
COL6A4P1-203ENST00000491915 MST1RQ04912 1400 aa13.1□□□□□ -0.31
COL6A4P1-203ENST00000491915 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
COL6A4P1-203ENST00000491915 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
COL6A4P1-203ENST00000491915 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
COL6A4P1-203ENST00000491915 PLEKHH1Q9ULM0 1364 aa13.08□□□□□ -0.31
COL6A4P1-203ENST00000491915 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
COL6A4P1-203ENST00000491915 JCADQ9P266 1359 aa13.07□□□□□ -0.32
COL6A4P1-203ENST00000491915 DCCP43146 1447 aa13.07□□□□□ -0.32
COL6A4P1-203ENST00000491915 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
COL6A4P1-203ENST00000491915 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
COL6A4P1-203ENST00000491915 PIK3C2GO75747 1445 aa13.06□□□□□ -0.32
COL6A4P1-203ENST00000491915 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
COL6A4P1-203ENST00000491915 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
COL6A4P1-203ENST00000491915 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 DHX57Q6P158 1386 aaKnown RBP13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
COL6A4P1-203ENST00000491915 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
COL6A4P1-203ENST00000491915 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
COL6A4P1-203ENST00000491915 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
COL6A4P1-203ENST00000491915 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms