RNA–Protein interactions for RNA: ENST00000491831.5

AFF4-209, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-209ENST00000491831 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
AFF4-209ENST00000491831 SLIT1O75093 1534 aa24.65■■□□□ 1.54
AFF4-209ENST00000491831 LTKP29376 864 aa24.65■■□□□ 1.54
AFF4-209ENST00000491831 STRCQ7RTU9 1775 aa24.64■■□□□ 1.54
AFF4-209ENST00000491831 NCKAP5LQ9HCH0 1330 aa24.63■■□□□ 1.53
AFF4-209ENST00000491831 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
AFF4-209ENST00000491831 NEURL4Q96JN8 1562 aa24.63■■□□□ 1.53
AFF4-209ENST00000491831 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
AFF4-209ENST00000491831 L3MBTL2Q969R5 705 aa24.6■■□□□ 1.53
AFF4-209ENST00000491831 TXNDC2Q86VQ3 553 aa24.59■■□□□ 1.53
AFF4-209ENST00000491831 KDM2AQ9Y2K7 1162 aa24.59■■□□□ 1.53
AFF4-209ENST00000491831 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.53
AFF4-209ENST00000491831 DCAF11Q8TEB1 546 aa24.58■■□□□ 1.53
AFF4-209ENST00000491831 ADGRF5Q8IZF2 1346 aa24.57■■□□□ 1.52
AFF4-209ENST00000491831 TONSLQ96HA7 1378 aa24.56■■□□□ 1.52
AFF4-209ENST00000491831 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
AFF4-209ENST00000491831 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
AFF4-209ENST00000491831 NRXN3Q9Y4C0 1643 aa24.54■■□□□ 1.52
AFF4-209ENST00000491831 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
AFF4-209ENST00000491831 EID1Q9Y6B2 187 aa24.52■■□□□ 1.52
AFF4-209ENST00000491831 RPGRIP1LQ68CZ1 1315 aa24.52■■□□□ 1.52
AFF4-209ENST00000491831 MYOM2P54296 1465 aa24.51■■□□□ 1.51
AFF4-209ENST00000491831 NPHP4O75161 1426 aaPredicted RBP24.49■■□□□ 1.51
AFF4-209ENST00000491831 NRXN1Q9ULB1 1477 aa24.48■■□□□ 1.51
AFF4-209ENST00000491831 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.47■■□□□ 1.51
AFF4-209ENST00000491831 PLEKHG1Q9ULL1 1385 aa24.47■■□□□ 1.51
AFF4-209ENST00000491831 MED14O60244 1454 aa24.47■■□□□ 1.51
AFF4-209ENST00000491831 BCANQ96GW7 911 aa24.46■■□□□ 1.51
AFF4-209ENST00000491831 SLC26A8Q96RN1 970 aa24.46■■□□□ 1.51
AFF4-209ENST00000491831 PIK3C2GO75747 1445 aa24.46■■□□□ 1.51
AFF4-209ENST00000491831 SETD1AO15047 1707 aaKnown RBP24.46■■□□□ 1.51
AFF4-209ENST00000491831 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
AFF4-209ENST00000491831 ADAMTS13Q76LX8 1427 aa24.46■■□□□ 1.51
AFF4-209ENST00000491831 SETBP1Q9Y6X0 1596 aa24.45■■□□□ 1.5
AFF4-209ENST00000491831 PRAG1Q86YV5 1406 aa24.44■■□□□ 1.5
AFF4-209ENST00000491831 NBPF8Q3BBV2 869 aa24.44■■□□□ 1.5
AFF4-209ENST00000491831 ALKQ9UM73 1620 aa24.42■■□□□ 1.5
AFF4-209ENST00000491831 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
AFF4-209ENST00000491831 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
AFF4-209ENST00000491831 ASXL1Q8IXJ9 1541 aa24.41■■□□□ 1.5
AFF4-209ENST00000491831 METP08581 1390 aa24.38■■□□□ 1.49
AFF4-209ENST00000491831 TRPM1Q7Z4N2 1603 aa24.38■■□□□ 1.49
AFF4-209ENST00000491831 TMEM132EQ6IEE7 984 aa24.36■■□□□ 1.49
AFF4-209ENST00000491831 NBPF1Q3BBV0 1214 aa24.35■■□□□ 1.49
AFF4-209ENST00000491831 STRCP1A6NGW2 1772 aa24.35■■□□□ 1.49
AFF4-209ENST00000491831 C14orf93Q9H972 538 aaKnown RBP24.34■■□□□ 1.49
AFF4-209ENST00000491831 LAMC1P11047 1609 aa24.33■■□□□ 1.49
AFF4-209ENST00000491831 DIP2AQ14689 1571 aa24.33■■□□□ 1.49
AFF4-209ENST00000491831 ADGRB1O14514 1584 aa24.32■■□□□ 1.48
AFF4-209ENST00000491831 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
AFF4-209ENST00000491831 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
AFF4-209ENST00000491831 KIAA1210Q9ULL0 1709 aa24.31■■□□□ 1.48
AFF4-209ENST00000491831 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
AFF4-209ENST00000491831 TBX22Q9Y458 520 aa24.3■■□□□ 1.48
AFF4-209ENST00000491831 ZNF335Q9H4Z2 1342 aaPredicted RBP24.3■■□□□ 1.48
AFF4-209ENST00000491831 STAC3Q96MF2 364 aa24.29■■□□□ 1.48
AFF4-209ENST00000491831 ZEB1P37275 1124 aaPredicted RBP24.27■■□□□ 1.48
AFF4-209ENST00000491831 STK26Q9P289 416 aa24.27■■□□□ 1.48
AFF4-209ENST00000491831 RALGAPBQ86X10 1494 aa24.27■■□□□ 1.48
AFF4-209ENST00000491831 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
AFF4-209ENST00000491831 DMRT2Q9Y5R5 561 aa24.24■■□□□ 1.47
AFF4-209ENST00000491831 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
AFF4-209ENST00000491831 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
AFF4-209ENST00000491831 RBM33Q96EV2 1170 aaKnown RBP24.23■■□□□ 1.47
AFF4-209ENST00000491831 YTHDC2Q9H6S0 1430 aaKnown RBP24.23■■□□□ 1.47
AFF4-209ENST00000491831 KCNA6P17658 529 aa24.22■■□□□ 1.47
AFF4-209ENST00000491831 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
AFF4-209ENST00000491831 TRAK1Q9UPV9 953 aa24.19■■□□□ 1.46
AFF4-209ENST00000491831 KNDC1Q76NI1 1749 aa24.19■■□□□ 1.46
AFF4-209ENST00000491831 ARHGEF28Q8N1W1 1705 aaKnown RBP24.19■■□□□ 1.46
AFF4-209ENST00000491831 LRPPRCP42704 1394 aaKnown RBP24.18■■□□□ 1.46
AFF4-209ENST00000491831 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
AFF4-209ENST00000491831 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
AFF4-209ENST00000491831 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
AFF4-209ENST00000491831 LTBP4Q8N2S1 1624 aa24.16■■□□□ 1.46
AFF4-209ENST00000491831 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
AFF4-209ENST00000491831 CARD11Q9BXL7 1154 aa24.15■■□□□ 1.46
AFF4-209ENST00000491831 XIRP1Q702N8 1843 aaKnown RBP24.15■■□□□ 1.46
AFF4-209ENST00000491831 CPS1P31327 1500 aa24.15■■□□□ 1.46
AFF4-209ENST00000491831 WAPLQ7Z5K2 1190 aa24.14■■□□□ 1.45
AFF4-209ENST00000491831 TECPR2O15040 1411 aa24.12■■□□□ 1.45
AFF4-209ENST00000491831 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
AFF4-209ENST00000491831 ABCC11Q96J66 1382 aa24.12■■□□□ 1.45
AFF4-209ENST00000491831 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
AFF4-209ENST00000491831 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
AFF4-209ENST00000491831 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
AFF4-209ENST00000491831 PRAM1Q96QH2 718 aa24.09■■□□□ 1.45
AFF4-209ENST00000491831 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.09■■□□□ 1.45
AFF4-209ENST00000491831 DLC1Q96QB1 1528 aa24.08■■□□□ 1.45
AFF4-209ENST00000491831 NALCNQ8IZF0 1738 aa24.08■■□□□ 1.45
AFF4-209ENST00000491831 PROSER2Q86WR7 435 aaPredicted RBP24.08■■□□□ 1.44
AFF4-209ENST00000491831 TMEM94Q12767 1356 aa24.07■■□□□ 1.44
AFF4-209ENST00000491831 QRICH2Q9H0J4 1663 aa24.07■■□□□ 1.44
AFF4-209ENST00000491831 USP47Q96K76 1375 aa24.06■■□□□ 1.44
AFF4-209ENST00000491831 HIRIP3Q9BW71 556 aaPredicted RBP24.05■■□□□ 1.44
AFF4-209ENST00000491831 POGKQ9P215 609 aa24.02■■□□□ 1.44
AFF4-209ENST00000491831 FAM135BQ49AJ0 1406 aa24.02■■□□□ 1.44
AFF4-209ENST00000491831 MINK1Q8N4C8 1332 aaPredicted RBP24.01■■□□□ 1.43
AFF4-209ENST00000491831 ST20-MTHFSA0A0A6YYL1 179 aa24■■□□□ 1.43
AFF4-209ENST00000491831 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms