RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
HCLS1-210ENST00000491824 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
HCLS1-210ENST00000491824 MPHOSPH9Q99550 1183 aa24.43■■□□□ 1.5
HCLS1-210ENST00000491824 LTBP4Q8N2S1 1624 aa24.42■■□□□ 1.5
HCLS1-210ENST00000491824 CPS1P31327 1500 aa24.41■■□□□ 1.5
HCLS1-210ENST00000491824 IQSEC2Q5JU85 1478 aa24.41■■□□□ 1.5
HCLS1-210ENST00000491824 ZFYVE9O95405 1425 aa24.39■■□□□ 1.5
HCLS1-210ENST00000491824 MYO5BQ9ULV0 1848 aa24.39■■□□□ 1.49
HCLS1-210ENST00000491824 CLTCL1P53675 1640 aa24.38■■□□□ 1.49
HCLS1-210ENST00000491824 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
HCLS1-210ENST00000491824 PLEKHG1Q9ULL1 1385 aa24.37■■□□□ 1.49
HCLS1-210ENST00000491824 HRCP23327 699 aa24.36■■□□□ 1.49
HCLS1-210ENST00000491824 KIF1BO60333 1816 aa24.35■■□□□ 1.49
HCLS1-210ENST00000491824 FOXD1Q16676 465 aa24.34■■□□□ 1.49
HCLS1-210ENST00000491824 SLC26A8Q96RN1 970 aa24.32■■□□□ 1.48
HCLS1-210ENST00000491824 NUTM2DQ5VT03 806 aaPredicted RBP24.29■■□□□ 1.48
HCLS1-210ENST00000491824 DIP2AQ14689 1571 aa24.28■■□□□ 1.48
HCLS1-210ENST00000491824 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
HCLS1-210ENST00000491824 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
HCLS1-210ENST00000491824 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
HCLS1-210ENST00000491824 TBX22Q9Y458 520 aa24.25■■□□□ 1.47
HCLS1-210ENST00000491824 KCNA6P17658 529 aa24.24■■□□□ 1.47
HCLS1-210ENST00000491824 UBAP1LF5GYI3 381 aa24.23■■□□□ 1.47
HCLS1-210ENST00000491824 NEXMIFQ5QGS0 1516 aa24.23■■□□□ 1.47
HCLS1-210ENST00000491824 NKTRP30414 1462 aaKnown RBP24.21■■□□□ 1.47
HCLS1-210ENST00000491824 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
HCLS1-210ENST00000491824 TOM1O60784 492 aa24.2■■□□□ 1.46
HCLS1-210ENST00000491824 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.46
HCLS1-210ENST00000491824 SETBP1Q9Y6X0 1596 aa24.19■■□□□ 1.46
HCLS1-210ENST00000491824 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
HCLS1-210ENST00000491824 NWD1Q149M9 1564 aa24.17■■□□□ 1.46
HCLS1-210ENST00000491824 STRCP1A6NGW2 1772 aa24.17■■□□□ 1.46
HCLS1-210ENST00000491824 RGL3Q3MIN7 710 aa24.17■■□□□ 1.46
HCLS1-210ENST00000491824 PROSER2Q86WR7 435 aaPredicted RBP24.17■■□□□ 1.46
HCLS1-210ENST00000491824 ADAMTS13Q76LX8 1427 aa24.17■■□□□ 1.46
HCLS1-210ENST00000491824 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
HCLS1-210ENST00000491824 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
HCLS1-210ENST00000491824 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.45
HCLS1-210ENST00000491824 TMEM94Q12767 1356 aa24.12■■□□□ 1.45
HCLS1-210ENST00000491824 PPLO60437 1756 aa24.11■■□□□ 1.45
HCLS1-210ENST00000491824 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
HCLS1-210ENST00000491824 C14orf37Q86TY3 774 aa24.1■■□□□ 1.45
HCLS1-210ENST00000491824 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
HCLS1-210ENST00000491824 MSH6P52701 1360 aa24.08■■□□□ 1.45
HCLS1-210ENST00000491824 PIP4K2BP78356 416 aa24.08■■□□□ 1.45
HCLS1-210ENST00000491824 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
HCLS1-210ENST00000491824 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
HCLS1-210ENST00000491824 METP08581 1390 aa24.03■■□□□ 1.44
HCLS1-210ENST00000491824 IFT172Q9UG01 1749 aa24.02■■□□□ 1.44
HCLS1-210ENST00000491824 ALKQ9UM73 1620 aa24.02■■□□□ 1.44
HCLS1-210ENST00000491824 ADGRF5Q8IZF2 1346 aa24.01■■□□□ 1.43
HCLS1-210ENST00000491824 MYOM2P54296 1465 aa24■■□□□ 1.43
HCLS1-210ENST00000491824 RBM33Q96EV2 1170 aaKnown RBP24■■□□□ 1.43
HCLS1-210ENST00000491824 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
HCLS1-210ENST00000491824 STAC3Q96MF2 364 aa23.99■■□□□ 1.43
HCLS1-210ENST00000491824 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
HCLS1-210ENST00000491824 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
HCLS1-210ENST00000491824 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
HCLS1-210ENST00000491824 ATF3P18847 181 aa23.97■■□□□ 1.43
HCLS1-210ENST00000491824 CADPS2Q86UW7 1296 aa23.95■■□□□ 1.42
HCLS1-210ENST00000491824 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
HCLS1-210ENST00000491824 C19orf44Q9H6X5 657 aa23.95■■□□□ 1.42
HCLS1-210ENST00000491824 LAMC1P11047 1609 aa23.95■■□□□ 1.42
HCLS1-210ENST00000491824 PTCH1Q13635 1447 aa23.94■■□□□ 1.42
HCLS1-210ENST00000491824 DISP3Q9P2K9 1392 aa23.94■■□□□ 1.42
HCLS1-210ENST00000491824 SETD1AO15047 1707 aaKnown RBP23.93■■□□□ 1.42
HCLS1-210ENST00000491824 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
HCLS1-210ENST00000491824 ILDR2Q71H61 639 aa23.91■■□□□ 1.42
HCLS1-210ENST00000491824 NRXN1Q9ULB1 1477 aa23.91■■□□□ 1.42
HCLS1-210ENST00000491824 DCCP43146 1447 aa23.9■■□□□ 1.42
HCLS1-210ENST00000491824 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.41
HCLS1-210ENST00000491824 C14orf93Q9H972 538 aaKnown RBP23.88■■□□□ 1.41
HCLS1-210ENST00000491824 SLAIN2Q9P270 581 aa23.88■■□□□ 1.41
HCLS1-210ENST00000491824 STK26Q9P289 416 aa23.88■■□□□ 1.41
HCLS1-210ENST00000491824 LRPPRCP42704 1394 aaKnown RBP23.88■■□□□ 1.41
HCLS1-210ENST00000491824 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
HCLS1-210ENST00000491824 FAM135BQ49AJ0 1406 aa23.87■■□□□ 1.41
HCLS1-210ENST00000491824 ADGRL3Q9HAR2 1447 aa23.87■■□□□ 1.41
HCLS1-210ENST00000491824 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.85■■□□□ 1.41
HCLS1-210ENST00000491824 HSPA1LP34931 641 aa23.85■■□□□ 1.41
HCLS1-210ENST00000491824 ROBO2Q9HCK4 1378 aa23.85■■□□□ 1.41
HCLS1-210ENST00000491824 CFAP70Q5T0N1 1121 aa23.84■■□□□ 1.41
HCLS1-210ENST00000491824 TMEM132EQ6IEE7 984 aa23.84■■□□□ 1.41
HCLS1-210ENST00000491824 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
HCLS1-210ENST00000491824 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
HCLS1-210ENST00000491824 TECPR2O15040 1411 aa23.83■■□□□ 1.4
HCLS1-210ENST00000491824 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
HCLS1-210ENST00000491824 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
HCLS1-210ENST00000491824 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
HCLS1-210ENST00000491824 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
HCLS1-210ENST00000491824 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
HCLS1-210ENST00000491824 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
HCLS1-210ENST00000491824 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
HCLS1-210ENST00000491824 SIN3AQ96ST3 1273 aa23.75■■□□□ 1.39
HCLS1-210ENST00000491824 POGKQ9P215 609 aa23.75■■□□□ 1.39
HCLS1-210ENST00000491824 SOCS7O14512 581 aa23.74■■□□□ 1.39
HCLS1-210ENST00000491824 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
HCLS1-210ENST00000491824 MST1RQ04912 1400 aa23.72■■□□□ 1.39
HCLS1-210ENST00000491824 CDC42BPGQ6DT37 1551 aa23.72■■□□□ 1.39
HCLS1-210ENST00000491824 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms