RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 ZFRQ96KR1 1074 aaKnown RBP7.33□□□□□ -1.24
CLIP4-211ENST00000491701 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
CLIP4-211ENST00000491701 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
CLIP4-211ENST00000491701 RAD54L2Q9Y4B4 1467 aa7.32□□□□□ -1.24
CLIP4-211ENST00000491701 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
CLIP4-211ENST00000491701 LAPTM4BQ86VI4 370 aa7.32□□□□□ -1.24
CLIP4-211ENST00000491701 FGD5Q6ZNL6 1462 aa7.32□□□□□ -1.24
CLIP4-211ENST00000491701 CEP164Q9UPV0 1460 aa7.32□□□□□ -1.24
CLIP4-211ENST00000491701 PHF14O94880 888 aa7.31□□□□□ -1.24
CLIP4-211ENST00000491701 MLLT3P42568 568 aaPredicted RBP7.31□□□□□ -1.24
CLIP4-211ENST00000491701 PDIA6Q15084 440 aa7.31□□□□□ -1.24
CLIP4-211ENST00000491701 FBXW7Q969H0 707 aa7.31□□□□□ -1.24
CLIP4-211ENST00000491701 POLA1P09884 1462 aaPredicted RBP7.31□□□□□ -1.24
CLIP4-211ENST00000491701 TARBP1Q13395 1621 aaKnown RBP7.31□□□□□ -1.24
CLIP4-211ENST00000491701 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-211ENST00000491701 ARIH1Q9Y4X5 557 aaPredicted RBP7.3□□□□□ -1.24
CLIP4-211ENST00000491701 WDR97A6NE52 1622 aa7.29□□□□□ -1.24
CLIP4-211ENST00000491701 KCNC4Q03721 635 aa7.29□□□□□ -1.24
CLIP4-211ENST00000491701 NYAP1Q6ZVC0 841 aa7.29□□□□□ -1.24
CLIP4-211ENST00000491701 FAM9AQ8IZU1 332 aaPredicted RBP7.29□□□□□ -1.24
CLIP4-211ENST00000491701 WDR62O43379 1518 aa7.29□□□□□ -1.24
CLIP4-211ENST00000491701 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
CLIP4-211ENST00000491701 IGF1RP08069 1367 aa7.28□□□□□ -1.24
CLIP4-211ENST00000491701 C6orf132Q5T0Z8 1188 aa7.28□□□□□ -1.24
CLIP4-211ENST00000491701 SMYD5Q6GMV2 418 aa7.28□□□□□ -1.24
CLIP4-211ENST00000491701 RBM33Q96EV2 1170 aaKnown RBP7.28□□□□□ -1.24
CLIP4-211ENST00000491701 ONECUT3O60422 494 aaPredicted RBP7.27□□□□□ -1.24
CLIP4-211ENST00000491701 TESPA1A2RU30 521 aaPredicted RBP7.27□□□□□ -1.25
CLIP4-211ENST00000491701 LCE2BO14633 110 aa7.27□□□□□ -1.25
CLIP4-211ENST00000491701 LMOD2Q6P5Q4 547 aa7.27□□□□□ -1.25
CLIP4-211ENST00000491701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLIP4-211ENST00000491701 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
CLIP4-211ENST00000491701 TRIM6-TRIM34B2RNG4 842 aa7.26□□□□□ -1.25
CLIP4-211ENST00000491701 HRCP23327 699 aa7.26□□□□□ -1.25
CLIP4-211ENST00000491701 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
CLIP4-211ENST00000491701 RBM26Q5T8P6 1007 aaKnown RBP7.25□□□□□ -1.25
CLIP4-211ENST00000491701 TSR3Q9UJK0 312 aaKnown RBP7.25□□□□□ -1.25
CLIP4-211ENST00000491701 HPS5Q9UPZ3 1129 aa7.25□□□□□ -1.25
CLIP4-211ENST00000491701 PRXQ9BXM0 1461 aa7.25□□□□□ -1.25
CLIP4-211ENST00000491701 NUTM2FA1L443 756 aa7.24□□□□□ -1.25
CLIP4-211ENST00000491701 MAP3K7O43318 606 aa7.24□□□□□ -1.25
CLIP4-211ENST00000491701 EPAS1Q99814 870 aa7.24□□□□□ -1.25
CLIP4-211ENST00000491701 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.24□□□□□ -1.25
CLIP4-211ENST00000491701 ZNF608Q9ULD9 1512 aaPredicted RBP7.23□□□□□ -1.25
CLIP4-211ENST00000491701 ABCA5Q8WWZ7 1642 aa7.23□□□□□ -1.25
CLIP4-211ENST00000491701 NEUROD2Q15784 382 aa7.23□□□□□ -1.25
CLIP4-211ENST00000491701 TDRD9Q8NDG6 1382 aaKnown RBP7.23□□□□□ -1.25
CLIP4-211ENST00000491701 LRCH3Q96II8 777 aa7.22□□□□□ -1.25
CLIP4-211ENST00000491701 EEA1Q15075 1411 aa7.21□□□□□ -1.25
CLIP4-211ENST00000491701 AQRO60306 1485 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLIP4-211ENST00000491701 GFRA3O60609 400 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 OSBPP22059 807 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 TSKSQ9UJT2 592 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 RAPGEF2Q9Y4G8 1499 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 KIF27Q86VH2 1401 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 KIF21BO75037 1637 aa7.2□□□□□ -1.26
CLIP4-211ENST00000491701 LAPTM4AQ15012 233 aa7.19□□□□□ -1.26
CLIP4-211ENST00000491701 PRIM1P49642 420 aaKnown RBP7.18□□□□□ -1.26
CLIP4-211ENST00000491701 TSR1Q2NL82 804 aaKnown RBP7.18□□□□□ -1.26
CLIP4-211ENST00000491701 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
CLIP4-211ENST00000491701 GPIHBP1Q8IV16 184 aa7.18□□□□□ -1.26
CLIP4-211ENST00000491701 IFT140Q96RY7 1462 aa7.18□□□□□ -1.26
CLIP4-211ENST00000491701 TJAP1Q5JTD0 557 aa7.18□□□□□ -1.26
CLIP4-211ENST00000491701 ZMYND15Q9H091 742 aa7.18□□□□□ -1.26
CLIP4-211ENST00000491701 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
CLIP4-211ENST00000491701 TNIKQ9UKE5 1360 aa7.17□□□□□ -1.26
CLIP4-211ENST00000491701 PPP4CP60510 307 aa7.17□□□□□ -1.26
CLIP4-211ENST00000491701 EN1Q05925 392 aaPredicted RBP7.17□□□□□ -1.26
CLIP4-211ENST00000491701 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
CLIP4-211ENST00000491701 SMAPO00193 183 aa7.16□□□□□ -1.26
CLIP4-211ENST00000491701 PRKD2Q9BZL6 878 aa7.16□□□□□ -1.26
CLIP4-211ENST00000491701 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
CLIP4-211ENST00000491701 CDHR5Q9HBB8 845 aa7.16□□□□□ -1.26
CLIP4-211ENST00000491701 ERICH3Q5RHP9 1530 aa7.15□□□□□ -1.26
CLIP4-211ENST00000491701 PBRM1Q86U86 1689 aa7.15□□□□□ -1.26
CLIP4-211ENST00000491701 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.27
CLIP4-211ENST00000491701 PACS2Q86VP3 889 aa7.15□□□□□ -1.27
CLIP4-211ENST00000491701 FAM198AQ9UFP1 575 aa7.15□□□□□ -1.27
CLIP4-211ENST00000491701 C3orf80F5H4A9 247 aa7.14□□□□□ -1.27
CLIP4-211ENST00000491701 ZC3H15Q8WU90 426 aaKnown RBP7.14□□□□□ -1.27
CLIP4-211ENST00000491701 MTRQ99707 1265 aa7.14□□□□□ -1.27
CLIP4-211ENST00000491701 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
CLIP4-211ENST00000491701 PPP1R18Q6NYC8 613 aa7.13□□□□□ -1.27
CLIP4-211ENST00000491701 EIF4G3O43432 1585 aaKnown RBP7.13□□□□□ -1.27
CLIP4-211ENST00000491701 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
CLIP4-211ENST00000491701 KRI1Q8N9T8 703 aaKnown RBP7.12□□□□□ -1.27
CLIP4-211ENST00000491701 CDCA7LQ96GN5 454 aa7.12□□□□□ -1.27
CLIP4-211ENST00000491701 SLC24A3Q9HC58 644 aa7.12□□□□□ -1.27
CLIP4-211ENST00000491701 FCHSD2O94868 740 aa7.11□□□□□ -1.27
CLIP4-211ENST00000491701 ZNF516Q92618 1163 aa7.11□□□□□ -1.27
CLIP4-211ENST00000491701 IL21Q9HBE4 155 aa7.11□□□□□ -1.27
CLIP4-211ENST00000491701 GRIN2BQ13224 1484 aa7.11□□□□□ -1.27
CLIP4-211ENST00000491701 ADAMTS12P58397 1594 aa7.11□□□□□ -1.27
CLIP4-211ENST00000491701 PRSS12P56730 875 aa7.1□□□□□ -1.27
CLIP4-211ENST00000491701 CUL7Q14999 1698 aa7.1□□□□□ -1.27
CLIP4-211ENST00000491701 V9GY48 417 aaPredicted RBP7.1□□□□□ -1.27
CLIP4-211ENST00000491701 RIMBP3CA6NJZ7 1639 aa7.09□□□□□ -1.27
CLIP4-211ENST00000491701 RIMBP3BA6NNM3 1639 aa7.09□□□□□ -1.27
CLIP4-211ENST00000491701 RIMBP3Q9UFD9 1639 aa7.09□□□□□ -1.27
CLIP4-211ENST00000491701 PTGDRQ13258 359 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms