RNA–Protein interactions for RNA: ENST00000491674.1

FXR1-221, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-221ENST00000491674 VGFO15240 615 aaPredicted RBP23.05■■□□□ 1.28
FXR1-221ENST00000491674 PPP1R15AO75807 674 aaPredicted RBP23.05■■□□□ 1.28
FXR1-221ENST00000491674 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
FXR1-221ENST00000491674 TIMELESSQ9UNS1 1208 aa23.05■■□□□ 1.28
FXR1-221ENST00000491674 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
FXR1-221ENST00000491674 UBR1Q8IWV7 1749 aa23.05■■□□□ 1.28
FXR1-221ENST00000491674 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
FXR1-221ENST00000491674 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
FXR1-221ENST00000491674 SLIT1O75093 1534 aa23.02■■□□□ 1.28
FXR1-221ENST00000491674 ARHGAP23Q9P227 1491 aa23.01■■□□□ 1.27
FXR1-221ENST00000491674 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
FXR1-221ENST00000491674 NUTM2DQ5VT03 806 aaPredicted RBP23■■□□□ 1.27
FXR1-221ENST00000491674 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
FXR1-221ENST00000491674 LTKP29376 864 aa22.99■■□□□ 1.27
FXR1-221ENST00000491674 BCANQ96GW7 911 aa22.97■■□□□ 1.27
FXR1-221ENST00000491674 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
FXR1-221ENST00000491674 SCAF11Q99590 1463 aaKnown RBP22.97■■□□□ 1.27
FXR1-221ENST00000491674 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.26
FXR1-221ENST00000491674 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
FXR1-221ENST00000491674 MYO5BQ9ULV0 1848 aa22.93■■□□□ 1.26
FXR1-221ENST00000491674 PLEKHG1Q9ULL1 1385 aa22.92■■□□□ 1.26
FXR1-221ENST00000491674 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
FXR1-221ENST00000491674 MYOM2P54296 1465 aa22.92■■□□□ 1.26
FXR1-221ENST00000491674 DMRT2Q9Y5R5 561 aa22.91■■□□□ 1.26
FXR1-221ENST00000491674 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
FXR1-221ENST00000491674 MED14O60244 1454 aa22.87■■□□□ 1.25
FXR1-221ENST00000491674 PPLO60437 1756 aa22.86■■□□□ 1.25
FXR1-221ENST00000491674 ZEB1P37275 1124 aaPredicted RBP22.86■■□□□ 1.25
FXR1-221ENST00000491674 NRXN1Q9ULB1 1477 aa22.85■■□□□ 1.25
FXR1-221ENST00000491674 PRAG1Q86YV5 1406 aa22.84■■□□□ 1.25
FXR1-221ENST00000491674 SLC26A8Q96RN1 970 aa22.84■■□□□ 1.25
FXR1-221ENST00000491674 TBX22Q9Y458 520 aa22.84■■□□□ 1.25
FXR1-221ENST00000491674 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
FXR1-221ENST00000491674 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
FXR1-221ENST00000491674 IFT172Q9UG01 1749 aa22.82■■□□□ 1.24
FXR1-221ENST00000491674 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
FXR1-221ENST00000491674 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
FXR1-221ENST00000491674 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
FXR1-221ENST00000491674 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
FXR1-221ENST00000491674 ADAMTS13Q76LX8 1427 aa22.78■■□□□ 1.24
FXR1-221ENST00000491674 IQGAP1P46940 1657 aa22.76■■□□□ 1.23
FXR1-221ENST00000491674 STRCQ7RTU9 1775 aa22.76■■□□□ 1.23
FXR1-221ENST00000491674 DIP2AQ14689 1571 aa22.75■■□□□ 1.23
FXR1-221ENST00000491674 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
FXR1-221ENST00000491674 PIK3R4Q99570 1358 aa22.74■■□□□ 1.23
FXR1-221ENST00000491674 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
FXR1-221ENST00000491674 ROCK2O75116 1388 aaKnown RBP22.72■■□□□ 1.23
FXR1-221ENST00000491674 NBPF1Q3BBV0 1214 aa22.71■■□□□ 1.23
FXR1-221ENST00000491674 METP08581 1390 aa22.71■■□□□ 1.23
FXR1-221ENST00000491674 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
FXR1-221ENST00000491674 LAMC1P11047 1609 aa22.7■■□□□ 1.22
FXR1-221ENST00000491674 KCNA6P17658 529 aa22.69■■□□□ 1.22
FXR1-221ENST00000491674 RALGAPBQ86X10 1494 aa22.68■■□□□ 1.22
FXR1-221ENST00000491674 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
FXR1-221ENST00000491674 STK26Q9P289 416 aa22.68■■□□□ 1.22
FXR1-221ENST00000491674 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
FXR1-221ENST00000491674 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
FXR1-221ENST00000491674 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
FXR1-221ENST00000491674 KIAA1210Q9ULL0 1709 aa22.65■■□□□ 1.22
FXR1-221ENST00000491674 GPRASP1Q5JY77 1395 aa22.65■■□□□ 1.22
FXR1-221ENST00000491674 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
FXR1-221ENST00000491674 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
FXR1-221ENST00000491674 TRPM1Q7Z4N2 1603 aa22.63■■□□□ 1.21
FXR1-221ENST00000491674 ADGRB1O14514 1584 aa22.63■■□□□ 1.21
FXR1-221ENST00000491674 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
FXR1-221ENST00000491674 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
FXR1-221ENST00000491674 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
FXR1-221ENST00000491674 SIRT1Q96EB6 747 aa22.6■■□□□ 1.21
FXR1-221ENST00000491674 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
FXR1-221ENST00000491674 SETD1AO15047 1707 aaKnown RBP22.6■■□□□ 1.21
FXR1-221ENST00000491674 PROSER2Q86WR7 435 aaPredicted RBP22.59■■□□□ 1.21
FXR1-221ENST00000491674 POGKQ9P215 609 aa22.58■■□□□ 1.21
FXR1-221ENST00000491674 EIF3AQ14152 1382 aaKnown RBP22.58■■□□□ 1.21
FXR1-221ENST00000491674 TECPR2O15040 1411 aa22.57■■□□□ 1.2
FXR1-221ENST00000491674 NKTRP30414 1462 aaKnown RBP22.55■■□□□ 1.2
FXR1-221ENST00000491674 PRAM1Q96QH2 718 aa22.55■■□□□ 1.2
FXR1-221ENST00000491674 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
FXR1-221ENST00000491674 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
FXR1-221ENST00000491674 FAM135BQ49AJ0 1406 aa22.54■■□□□ 1.2
FXR1-221ENST00000491674 NWD1Q149M9 1564 aa22.54■■□□□ 1.2
FXR1-221ENST00000491674 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
FXR1-221ENST00000491674 WAPLQ7Z5K2 1190 aa22.53■■□□□ 1.2
FXR1-221ENST00000491674 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
FXR1-221ENST00000491674 DLC1Q96QB1 1528 aa22.52■■□□□ 1.2
FXR1-221ENST00000491674 USP47Q96K76 1375 aa22.52■■□□□ 1.2
FXR1-221ENST00000491674 CENPJQ9HC77 1338 aaPredicted RBP22.52■■□□□ 1.2
FXR1-221ENST00000491674 CPS1P31327 1500 aa22.52■■□□□ 1.19
FXR1-221ENST00000491674 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
FXR1-221ENST00000491674 SAFB2Q14151 953 aaKnown RBP eCLIP22.5■■□□□ 1.19
FXR1-221ENST00000491674 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
FXR1-221ENST00000491674 TMEM94Q12767 1356 aa22.48■■□□□ 1.19
FXR1-221ENST00000491674 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
FXR1-221ENST00000491674 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
FXR1-221ENST00000491674 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
FXR1-221ENST00000491674 KNDC1Q76NI1 1749 aa22.46■■□□□ 1.19
FXR1-221ENST00000491674 HSPA5P11021 654 aaKnown RBP22.46■■□□□ 1.19
FXR1-221ENST00000491674 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
FXR1-221ENST00000491674 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
FXR1-221ENST00000491674 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
FXR1-221ENST00000491674 LTBP4Q8N2S1 1624 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms