RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 SHPRHQ149N8 1683 aa21.83■■□□□ 1.09
NCK1-211ENST00000491539 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
NCK1-211ENST00000491539 EID1Q9Y6B2 187 aa21.83■■□□□ 1.09
NCK1-211ENST00000491539 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.08
NCK1-211ENST00000491539 APLP2Q06481 763 aa21.82■■□□□ 1.08
NCK1-211ENST00000491539 ADGRL2O95490 1459 aa21.82■■□□□ 1.08
NCK1-211ENST00000491539 IDI1Q13907 227 aa21.81■■□□□ 1.08
NCK1-211ENST00000491539 KANK1Q14678 1352 aa21.81■■□□□ 1.08
NCK1-211ENST00000491539 KCNA6P17658 529 aa21.78■■□□□ 1.08
NCK1-211ENST00000491539 AHDC1Q5TGY3 1603 aaPredicted RBP21.77■■□□□ 1.07
NCK1-211ENST00000491539 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
NCK1-211ENST00000491539 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
NCK1-211ENST00000491539 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
NCK1-211ENST00000491539 DIP2AQ14689 1571 aa21.75■■□□□ 1.07
NCK1-211ENST00000491539 CHIC2Q9UKJ5 165 aa21.75■■□□□ 1.07
NCK1-211ENST00000491539 MSH6P52701 1360 aa21.74■■□□□ 1.07
NCK1-211ENST00000491539 NRXN3Q9Y4C0 1643 aa21.74■■□□□ 1.07
NCK1-211ENST00000491539 PROSER2Q86WR7 435 aaPredicted RBP21.74■■□□□ 1.07
NCK1-211ENST00000491539 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
NCK1-211ENST00000491539 PLEKHG1Q9ULL1 1385 aa21.73■■□□□ 1.07
NCK1-211ENST00000491539 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
NCK1-211ENST00000491539 XRN1Q8IZH2 1706 aaKnown RBP21.72■■□□□ 1.07
NCK1-211ENST00000491539 NHSL1Q5SYE7 1610 aa21.7■■□□□ 1.06
NCK1-211ENST00000491539 JCADQ9P266 1359 aa21.7■■□□□ 1.06
NCK1-211ENST00000491539 ADAMTS13Q76LX8 1427 aa21.7■■□□□ 1.06
NCK1-211ENST00000491539 ANKRD50Q9ULJ7 1429 aa21.66■■□□□ 1.06
NCK1-211ENST00000491539 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
NCK1-211ENST00000491539 SPHKAPQ2M3C7 1700 aa21.65■■□□□ 1.06
NCK1-211ENST00000491539 TRPM2O94759 1503 aa21.64■■□□□ 1.05
NCK1-211ENST00000491539 SLAIN2Q9P270 581 aa21.63■■□□□ 1.05
NCK1-211ENST00000491539 PTPRUQ92729 1446 aa21.62■■□□□ 1.05
NCK1-211ENST00000491539 BCANQ96GW7 911 aa21.61■■□□□ 1.05
NCK1-211ENST00000491539 ASXL1Q8IXJ9 1541 aa21.6■■□□□ 1.05
NCK1-211ENST00000491539 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
NCK1-211ENST00000491539 SETBP1Q9Y6X0 1596 aa21.57■■□□□ 1.04
NCK1-211ENST00000491539 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
NCK1-211ENST00000491539 NCOA3Q9Y6Q9 1424 aa21.56■■□□□ 1.04
NCK1-211ENST00000491539 PPP1R15AO75807 674 aaPredicted RBP21.56■■□□□ 1.04
NCK1-211ENST00000491539 SPATA31A6Q5VVP1 1343 aa21.53■■□□□ 1.04
NCK1-211ENST00000491539 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
NCK1-211ENST00000491539 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
NCK1-211ENST00000491539 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
NCK1-211ENST00000491539 MST1RQ04912 1400 aa21.51■■□□□ 1.03
NCK1-211ENST00000491539 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
NCK1-211ENST00000491539 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
NCK1-211ENST00000491539 DCCP43146 1447 aa21.49■■□□□ 1.03
NCK1-211ENST00000491539 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
NCK1-211ENST00000491539 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
NCK1-211ENST00000491539 LAMC1P11047 1609 aa21.48■■□□□ 1.03
NCK1-211ENST00000491539 RGS12O14924 1447 aa21.48■■□□□ 1.03
NCK1-211ENST00000491539 CHGAP10645 457 aaKnown RBP21.48■■□□□ 1.03
NCK1-211ENST00000491539 MEX3CQ5U5Q3 659 aaKnown RBP21.48■■□□□ 1.03
NCK1-211ENST00000491539 NEXMIFQ5QGS0 1516 aa21.48■■□□□ 1.03
NCK1-211ENST00000491539 CDK12Q9NYV4 1490 aaPredicted RBP21.47■■□□□ 1.03
NCK1-211ENST00000491539 BRINP3Q76B58 766 aa21.47■■□□□ 1.03
NCK1-211ENST00000491539 KIF1BO60333 1816 aa21.45■■□□□ 1.02
NCK1-211ENST00000491539 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
NCK1-211ENST00000491539 CADPS2Q86UW7 1296 aa21.43■■□□□ 1.02
NCK1-211ENST00000491539 ZNF772Q68DY9 489 aaPredicted RBP21.42■■□□□ 1.02
NCK1-211ENST00000491539 C19orf44Q9H6X5 657 aa21.42■■□□□ 1.02
NCK1-211ENST00000491539 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
NCK1-211ENST00000491539 ROCK1Q13464 1354 aa21.41■■□□□ 1.02
NCK1-211ENST00000491539 NUTM2BA6NNL0 878 aaPredicted RBP21.41■■□□□ 1.02
NCK1-211ENST00000491539 NUTM2EB1AL46 878 aaPredicted RBP21.41■■□□□ 1.02
NCK1-211ENST00000491539 ATF3P18847 181 aa21.41■■□□□ 1.02
NCK1-211ENST00000491539 NUTM2AQ8IVF1 878 aaPredicted RBP21.41■■□□□ 1.02
NCK1-211ENST00000491539 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.41■■□□□ 1.02
NCK1-211ENST00000491539 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
NCK1-211ENST00000491539 METP08581 1390 aa21.4■■□□□ 1.02
NCK1-211ENST00000491539 AFF2P51816 1311 aa21.4■■□□□ 1.02
NCK1-211ENST00000491539 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
NCK1-211ENST00000491539 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
NCK1-211ENST00000491539 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
NCK1-211ENST00000491539 COL22A1Q8NFW1 1626 aaPredicted RBP21.37■■□□□ 1.01
NCK1-211ENST00000491539 PPLO60437 1756 aa21.36■■□□□ 1.01
NCK1-211ENST00000491539 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
NCK1-211ENST00000491539 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
NCK1-211ENST00000491539 NUP155O75694 1391 aa21.36■■□□□ 1.01
NCK1-211ENST00000491539 EP400Q96L91 3159 aa21.35■■□□□ 1.01
NCK1-211ENST00000491539 SRCAPQ6ZRS2 3230 aa21.34■■□□□ 1.01
NCK1-211ENST00000491539 RXRBP28702 533 aa21.34■■□□□ 1.01
NCK1-211ENST00000491539 C1orf167Q5SNV9 1468 aa21.3■■□□□ 1
NCK1-211ENST00000491539 PTCH1Q13635 1447 aa21.29■■□□□ 1
NCK1-211ENST00000491539 RRBP1Q9P2E9 1410 aaKnown RBP21.29■■□□□ 1
NCK1-211ENST00000491539 C8orf37Q96NL8 207 aa21.28■■□□□ 1
NCK1-211ENST00000491539 CDC42BPGQ6DT37 1551 aa21.25■□□□□ 0.99
NCK1-211ENST00000491539 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.25■□□□□ 0.99
NCK1-211ENST00000491539 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
NCK1-211ENST00000491539 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
NCK1-211ENST00000491539 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
NCK1-211ENST00000491539 BRWD3Q6RI45 1802 aa21.23■□□□□ 0.99
NCK1-211ENST00000491539 ITGAEP38570 1179 aa21.23■□□□□ 0.99
NCK1-211ENST00000491539 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
NCK1-211ENST00000491539 ABCA3Q99758 1704 aa21.21■□□□□ 0.99
NCK1-211ENST00000491539 MYOM2P54296 1465 aa21.2■□□□□ 0.98
NCK1-211ENST00000491539 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
NCK1-211ENST00000491539 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
NCK1-211ENST00000491539 KNDC1Q76NI1 1749 aa21.2■□□□□ 0.98
NCK1-211ENST00000491539 PXDNQ92626 1479 aa21.2■□□□□ 0.98
NCK1-211ENST00000491539 RBM6P78332 1123 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms