RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ZNF326Q5BKZ1 582 aaKnown RBP31.23■■■□□ 2.59
VCPKMT-204ENST00000491402 PPLO60437 1756 aa31.22■■■□□ 2.59
VCPKMT-204ENST00000491402 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
VCPKMT-204ENST00000491402 KDM2AQ9Y2K7 1162 aa31.19■■■□□ 2.58
VCPKMT-204ENST00000491402 RPGRIP1LQ68CZ1 1315 aa31.17■■■□□ 2.58
VCPKMT-204ENST00000491402 MYOM2P54296 1465 aa31.15■■■□□ 2.58
VCPKMT-204ENST00000491402 TMEM2Q9UHN6 1383 aa31.15■■■□□ 2.58
VCPKMT-204ENST00000491402 STAC3Q96MF2 364 aa31.14■■■□□ 2.58
VCPKMT-204ENST00000491402 NCKAP5LQ9HCH0 1330 aa31.12■■■□□ 2.57
VCPKMT-204ENST00000491402 PRAG1Q86YV5 1406 aa31.12■■■□□ 2.57
VCPKMT-204ENST00000491402 ANKLE2Q86XL3 938 aa31.12■■■□□ 2.57
VCPKMT-204ENST00000491402 TXNDC2Q86VQ3 553 aa31.11■■■□□ 2.57
VCPKMT-204ENST00000491402 LTKP29376 864 aa31.1■■■□□ 2.57
VCPKMT-204ENST00000491402 NBPF8Q3BBV2 869 aa31.1■■■□□ 2.57
VCPKMT-204ENST00000491402 NUTM2DQ5VT03 806 aaPredicted RBP31.1■■■□□ 2.57
VCPKMT-204ENST00000491402 SLIT1O75093 1534 aa31.1■■■□□ 2.57
VCPKMT-204ENST00000491402 ARHGAP23Q9P227 1491 aa31.1■■■□□ 2.57
VCPKMT-204ENST00000491402 EID1Q9Y6B2 187 aa31.09■■■□□ 2.57
VCPKMT-204ENST00000491402 ZFYVE9O95405 1425 aa31.09■■■□□ 2.57
VCPKMT-204ENST00000491402 RIMS2Q9UQ26 1411 aa31.08■■■□□ 2.57
VCPKMT-204ENST00000491402 NRXN1Q9ULB1 1477 aa31.08■■■□□ 2.57
VCPKMT-204ENST00000491402 ADGRF5Q8IZF2 1346 aa31.06■■■□□ 2.56
VCPKMT-204ENST00000491402 HDGFP51858 240 aaKnown RBP31.05■■■□□ 2.56
VCPKMT-204ENST00000491402 STRCQ7RTU9 1775 aa31.05■■■□□ 2.56
VCPKMT-204ENST00000491402 VGFO15240 615 aaPredicted RBP31.05■■■□□ 2.56
VCPKMT-204ENST00000491402 SENP3Q9H4L4 574 aaPredicted RBP31.03■■■□□ 2.56
VCPKMT-204ENST00000491402 TRPM1Q7Z4N2 1603 aa31.03■■■□□ 2.56
VCPKMT-204ENST00000491402 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.02■■■□□ 2.56
VCPKMT-204ENST00000491402 SCAF11Q99590 1463 aaKnown RBP31.02■■■□□ 2.56
VCPKMT-204ENST00000491402 PIK3C2GO75747 1445 aa31.02■■■□□ 2.56
VCPKMT-204ENST00000491402 RALGAPBQ86X10 1494 aa31■■■□□ 2.55
VCPKMT-204ENST00000491402 POLR1AO95602 1720 aaPredicted RBP30.99■■■□□ 2.55
VCPKMT-204ENST00000491402 KIAA1210Q9ULL0 1709 aa30.97■■■□□ 2.55
VCPKMT-204ENST00000491402 BCANQ96GW7 911 aa30.95■■■□□ 2.55
VCPKMT-204ENST00000491402 NPHP4O75161 1426 aaPredicted RBP30.94■■■□□ 2.54
VCPKMT-204ENST00000491402 DMRT2Q9Y5R5 561 aa30.93■■■□□ 2.54
VCPKMT-204ENST00000491402 MED14O60244 1454 aa30.93■■■□□ 2.54
VCPKMT-204ENST00000491402 LAMC1P11047 1609 aa30.91■■■□□ 2.54
VCPKMT-204ENST00000491402 ROCK2O75116 1388 aaKnown RBP30.91■■■□□ 2.54
VCPKMT-204ENST00000491402 PLEKHG1Q9ULL1 1385 aa30.9■■■□□ 2.54
VCPKMT-204ENST00000491402 NRXN3Q9Y4C0 1643 aa30.89■■■□□ 2.54
VCPKMT-204ENST00000491402 SETBP1Q9Y6X0 1596 aa30.89■■■□□ 2.54
VCPKMT-204ENST00000491402 CFAP70Q5T0N1 1121 aa30.89■■■□□ 2.54
VCPKMT-204ENST00000491402 NBPF1Q3BBV0 1214 aa30.88■■■□□ 2.53
VCPKMT-204ENST00000491402 IQGAP1P46940 1657 aa30.88■■■□□ 2.53
VCPKMT-204ENST00000491402 SLC26A8Q96RN1 970 aa30.87■■■□□ 2.53
VCPKMT-204ENST00000491402 C14orf93Q9H972 538 aaKnown RBP30.87■■■□□ 2.53
VCPKMT-204ENST00000491402 GPRASP1Q5JY77 1395 aa30.86■■■□□ 2.53
VCPKMT-204ENST00000491402 ALKQ9UM73 1620 aa30.85■■■□□ 2.53
VCPKMT-204ENST00000491402 SETD1AO15047 1707 aaKnown RBP30.84■■■□□ 2.53
VCPKMT-204ENST00000491402 CARD11Q9BXL7 1154 aa30.82■■■□□ 2.52
VCPKMT-204ENST00000491402 ADGRB1O14514 1584 aa30.81■■■□□ 2.52
VCPKMT-204ENST00000491402 ADAMTS13Q76LX8 1427 aa30.78■■■□□ 2.52
VCPKMT-204ENST00000491402 ASXL1Q8IXJ9 1541 aa30.78■■■□□ 2.52
VCPKMT-204ENST00000491402 TBX22Q9Y458 520 aa30.77■■■□□ 2.52
VCPKMT-204ENST00000491402 USP47Q96K76 1375 aa30.74■■■□□ 2.51
VCPKMT-204ENST00000491402 TMEM132EQ6IEE7 984 aa30.74■■■□□ 2.51
VCPKMT-204ENST00000491402 DIP2AQ14689 1571 aa30.73■■■□□ 2.51
VCPKMT-204ENST00000491402 EIF4G2P78344 907 aaKnown RBP eCLIP30.71■■■□□ 2.51
VCPKMT-204ENST00000491402 ZNF335Q9H4Z2 1342 aaPredicted RBP30.7■■■□□ 2.5
VCPKMT-204ENST00000491402 METP08581 1390 aa30.69■■■□□ 2.5
VCPKMT-204ENST00000491402 HSPA5P11021 654 aaKnown RBP30.67■■■□□ 2.5
VCPKMT-204ENST00000491402 YTHDC2Q9H6S0 1430 aaKnown RBP30.66■■■□□ 2.5
VCPKMT-204ENST00000491402 HIRIP3Q9BW71 556 aaPredicted RBP30.63■■■□□ 2.49
VCPKMT-204ENST00000491402 ARHGEF28Q8N1W1 1705 aaKnown RBP30.62■■■□□ 2.49
VCPKMT-204ENST00000491402 KCNA6P17658 529 aa30.61■■■□□ 2.49
VCPKMT-204ENST00000491402 EIF3AQ14152 1382 aaKnown RBP30.61■■■□□ 2.49
VCPKMT-204ENST00000491402 TRAK1Q9UPV9 953 aa30.61■■■□□ 2.49
VCPKMT-204ENST00000491402 AMOTL2Q9Y2J4 779 aa30.6■■■□□ 2.49
VCPKMT-204ENST00000491402 LRPPRCP42704 1394 aaKnown RBP30.6■■■□□ 2.49
VCPKMT-204ENST00000491402 PIK3R4Q99570 1358 aa30.6■■■□□ 2.49
VCPKMT-204ENST00000491402 STK26Q9P289 416 aa30.59■■■□□ 2.49
VCPKMT-204ENST00000491402 PTPRUQ92729 1446 aa30.59■■■□□ 2.49
VCPKMT-204ENST00000491402 KNDC1Q76NI1 1749 aa30.59■■■□□ 2.49
VCPKMT-204ENST00000491402 ST20-MTHFSA0A0A6YYL1 179 aa30.59■■■□□ 2.49
VCPKMT-204ENST00000491402 CHD2O14647 1828 aaKnown RBP30.58■■■□□ 2.49
VCPKMT-204ENST00000491402 STRCP1A6NGW2 1772 aa30.57■■■□□ 2.48
VCPKMT-204ENST00000491402 ABCC11Q96J66 1382 aa30.56■■■□□ 2.48
VCPKMT-204ENST00000491402 DLC1Q96QB1 1528 aa30.55■■■□□ 2.48
VCPKMT-204ENST00000491402 ZNF316A6NFI3 1004 aaPredicted RBP30.54■■■□□ 2.48
VCPKMT-204ENST00000491402 TECPR2O15040 1411 aa30.54■■■□□ 2.48
VCPKMT-204ENST00000491402 XRN1Q8IZH2 1706 aaKnown RBP30.53■■■□□ 2.48
VCPKMT-204ENST00000491402 CPS1P31327 1500 aa30.53■■■□□ 2.48
VCPKMT-204ENST00000491402 LTBP4Q8N2S1 1624 aa30.52■■■□□ 2.48
VCPKMT-204ENST00000491402 QRICH2Q9H0J4 1663 aa30.51■■■□□ 2.47
VCPKMT-204ENST00000491402 NWD1Q149M9 1564 aa30.5■■■□□ 2.47
VCPKMT-204ENST00000491402 PROSER2Q86WR7 435 aaPredicted RBP30.49■■■□□ 2.47
VCPKMT-204ENST00000491402 CENPJQ9HC77 1338 aaPredicted RBP30.49■■■□□ 2.47
VCPKMT-204ENST00000491402 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
VCPKMT-204ENST00000491402 TESK2Q96S53 571 aa30.48■■■□□ 2.47
VCPKMT-204ENST00000491402 PRAM1Q96QH2 718 aa30.46■■■□□ 2.47
VCPKMT-204ENST00000491402 PTCH1Q13635 1447 aa30.45■■■□□ 2.47
VCPKMT-204ENST00000491402 FAM135BQ49AJ0 1406 aa30.45■■■□□ 2.47
VCPKMT-204ENST00000491402 ROBO2Q9HCK4 1378 aa30.45■■■□□ 2.46
VCPKMT-204ENST00000491402 SBNO2Q9Y2G9 1366 aa30.45■■■□□ 2.46
VCPKMT-204ENST00000491402 NKTRP30414 1462 aaKnown RBP30.44■■■□□ 2.46
VCPKMT-204ENST00000491402 SIRT1Q96EB6 747 aa30.43■■■□□ 2.46
VCPKMT-204ENST00000491402 POGKQ9P215 609 aa30.43■■■□□ 2.46
VCPKMT-204ENST00000491402 LRRC7Q96NW7 1537 aa30.42■■■□□ 2.46
VCPKMT-204ENST00000491402 PLEKHH1Q9ULM0 1364 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms