RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	CHIC2	Q9UKJ5	165 aa		30.22	■■■□□ 2.43
CDK5RAP2-218	ENST00000491334	NWD1	Q149M9	1564 aa		30.22	■■■□□ 2.43
CDK5RAP2-218	ENST00000491334	DAPK1	P53355	1430 aa		30.21	■■■□□ 2.43
CDK5RAP2-218	ENST00000491334	PPP1R15A	O75807	674 aa	Predicted RBP	30.2	■■■□□ 2.43
CDK5RAP2-218	ENST00000491334	UPF1	Q92900	1129 aa	Known RBP eCLIP	30.2	■■■□□ 2.43
CDK5RAP2-218	ENST00000491334	C14orf37	Q86TY3	774 aa		30.19	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	ADGRB3	O60242	1522 aa		30.18	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	PLEKHG1	Q9ULL1	1385 aa		30.17	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	SETD1A	O15047	1707 aa	Known RBP	30.17	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	TBX22	Q9Y458	520 aa		30.17	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	NCOA3	Q9Y6Q9	1424 aa		30.16	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	APLP2	Q06481	763 aa		30.16	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	CROCC2	H7BZ55	1655 aa		30.16	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	FGD6	Q6ZV73	1430 aa		30.15	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	TRIM52	Q96A61	297 aa		30.15	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	PTPN23	Q9H3S7	1636 aa		30.14	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	CADPS2	Q86UW7	1296 aa		30.14	■■■□□ 2.42
CDK5RAP2-218	ENST00000491334	LOC105371045	A0A1W2PR82	267 aa		30.13	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	ATF3	P18847	181 aa		30.12	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	C19orf44	Q9H6X5	657 aa		30.12	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	RXRB	P28702	533 aa		30.11	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	30.11	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	ZFYVE9	O95405	1425 aa		30.1	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	RIMS2	Q9UQ26	1411 aa		30.1	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	COL16A1	Q07092	1604 aa	Predicted RBP	30.1	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	CHD2	O14647	1828 aa	Known RBP	30.09	■■■□□ 2.41
CDK5RAP2-218	ENST00000491334	LRP6	O75581	1613 aa		30.07	■■■□□ 2.4
CDK5RAP2-218	ENST00000491334	RPRD2	Q5VT52	1461 aa	Known RBP	30.07	■■■□□ 2.4
CDK5RAP2-218	ENST00000491334	CHGA	P10645	457 aa	Known RBP	30.04	■■■□□ 2.4
CDK5RAP2-218	ENST00000491334	NUTM2B	A6NNL0	878 aa	Predicted RBP	30	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	NUTM2E	B1AL46	878 aa	Predicted RBP	30	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	NUTM2A	Q8IVF1	878 aa	Predicted RBP	30	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	PIK3R4	Q99570	1358 aa		30	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.98	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.97	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	BRINP3	Q76B58	766 aa		29.97	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	ANKRD50	Q9ULJ7	1429 aa		29.96	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	AMOTL2	Q9Y2J4	779 aa		29.95	■■■□□ 2.39
CDK5RAP2-218	ENST00000491334	ADAMTS13	Q76LX8	1427 aa		29.95	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	SHPRH	Q149N8	1683 aa		29.95	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	ADGRL2	O95490	1459 aa		29.94	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.94	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.94	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	TMEM131L	A2VDJ0	1609 aa		29.94	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	MYO5B	Q9ULV0	1848 aa		29.92	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	AFF2	P51816	1311 aa		29.92	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	FAM50A	Q14320	339 aa	Known RBP	29.91	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	GCC2	Q8IWJ2	1684 aa		29.9	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	LRRC59	Q96AG4	307 aa	Known RBP	29.89	■■■□□ 2.38
CDK5RAP2-218	ENST00000491334	DIP2A	Q14689	1571 aa		29.88	■■■□□ 2.37
CDK5RAP2-218	ENST00000491334	QTRT2	Q9H974	415 aa	Known RBP	29.86	■■■□□ 2.37
CDK5RAP2-218	ENST00000491334	RBM6	P78332	1123 aa	Known RBP	29.84	■■■□□ 2.37
CDK5RAP2-218	ENST00000491334	DCC	P43146	1447 aa		29.84	■■■□□ 2.37
CDK5RAP2-218	ENST00000491334	SETD5	Q9C0A6	1442 aa		29.84	■■■□□ 2.37
CDK5RAP2-218	ENST00000491334	TRPM2	O94759	1503 aa		29.81	■■■□□ 2.36
CDK5RAP2-218	ENST00000491334	C8orf37	Q96NL8	207 aa		29.81	■■■□□ 2.36
CDK5RAP2-218	ENST00000491334	PTPRU	Q92729	1446 aa		29.8	■■■□□ 2.36
CDK5RAP2-218	ENST00000491334	ASXL1	Q8IXJ9	1541 aa		29.77	■■■□□ 2.36
CDK5RAP2-218	ENST00000491334	NGLY1	Q96IV0	654 aa		29.75	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334	MST1R	Q04912	1400 aa		29.74	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334	SRCAP	Q6ZRS2	3230 aa		29.73	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334	RGS12	O14924	1447 aa		29.71	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334	FOXD1	Q16676	465 aa		29.7	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334	DDX17	Q92841	729 aa	Known RBP	29.7	■■■□□ 2.35
CDK5RAP2-218	ENST00000491334		E9PCH4	1651 aa		29.69	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	PNPLA6	Q8IY17	1366 aa		29.69	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	UNC13B	O14795	1591 aa		29.69	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	ADAMTS2	O95450	1211 aa		29.67	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	ZNF326	Q5BKZ1	582 aa	Known RBP	29.67	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	NUP155	O75694	1391 aa		29.66	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	NHSL1	Q5SYE7	1610 aa		29.65	■■■□□ 2.34
CDK5RAP2-218	ENST00000491334	MET	P08581	1390 aa		29.64	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	ATAD2	Q6PL18	1390 aa		29.64	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	ROCK1	Q13464	1354 aa		29.62	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	ADGRL3	Q9HAR2	1447 aa		29.62	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	USP21	Q9UK80	565 aa		29.61	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	XRN1	Q8IZH2	1706 aa	Known RBP	29.61	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	SETBP1	Q9Y6X0	1596 aa		29.6	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	ZRANB1	Q9UGI0	708 aa		29.6	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	TRPC5	Q9UL62	973 aa	Predicted RBP	29.6	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	IQGAP3	Q86VI3	1631 aa		29.59	■■■□□ 2.33
CDK5RAP2-218	ENST00000491334	NRXN3	Q9Y4C0	1643 aa		29.56	■■■□□ 2.32
CDK5RAP2-218	ENST00000491334	FNBP4	Q8N3X1	1017 aa	Predicted RBP	29.54	■■■□□ 2.32
CDK5RAP2-218	ENST00000491334	C1orf167	Q5SNV9	1468 aa		29.54	■■■□□ 2.32
CDK5RAP2-218	ENST00000491334	SOS2	Q07890	1332 aa	Predicted RBP	29.53	■■■□□ 2.32
CDK5RAP2-218	ENST00000491334	CCDC125	Q86Z20	511 aa		29.52	■■■□□ 2.32
CDK5RAP2-218	ENST00000491334	ORAI2	Q96SN7	254 aa		29.51	■■■□□ 2.31
CDK5RAP2-218	ENST00000491334	PTCH1	Q13635	1447 aa		29.48	■■■□□ 2.31
CDK5RAP2-218	ENST00000491334	ITGAE	P38570	1179 aa		29.45	■■■□□ 2.31
CDK5RAP2-218	ENST00000491334	NALCN	Q8IZF0	1738 aa		29.43	■■■□□ 2.3
CDK5RAP2-218	ENST00000491334	ATRN	O75882	1429 aa		29.43	■■■□□ 2.3
CDK5RAP2-218	ENST00000491334	VGF	O15240	615 aa	Predicted RBP	29.42	■■■□□ 2.3
CDK5RAP2-218	ENST00000491334	LAMC1	P11047	1609 aa		29.41	■■■□□ 2.3
CDK5RAP2-218	ENST00000491334	SPHKAP	Q2M3C7	1700 aa		29.39	■■■□□ 2.3
CDK5RAP2-218	ENST00000491334	ROBO2	Q9HCK4	1378 aa		29.38	■■■□□ 2.29
CDK5RAP2-218	ENST00000491334	NEXMIF	Q5QGS0	1516 aa		29.36	■■■□□ 2.29
CDK5RAP2-218	ENST00000491334	GJD4	Q96KN9	370 aa	Predicted RBP	29.36	■■■□□ 2.29
CDK5RAP2-218	ENST00000491334	NPHP3	Q7Z494	1330 aa		29.36	■■■□□ 2.29
CDK5RAP2-218	ENST00000491334	ESCO1	Q5FWF5	840 aa		29.35	■■■□□ 2.29
CDK5RAP2-218	ENST00000491334	EP400	Q96L91	3159 aa		29.34	■■■□□ 2.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms