RNA–Protein interactions for RNA: ENST00000491291.1

PGK1-205, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 5

Gene PGK1, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-205ENST00000491291 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
PGK1-205ENST00000491291 MYOM2P54296 1465 aa12.87□□□□□ -0.35
PGK1-205ENST00000491291 RIMS2Q9UQ26 1411 aa12.86□□□□□ -0.35
PGK1-205ENST00000491291 SLIT1O75093 1534 aa12.85□□□□□ -0.35
PGK1-205ENST00000491291 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
PGK1-205ENST00000491291 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
PGK1-205ENST00000491291 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
PGK1-205ENST00000491291 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
PGK1-205ENST00000491291 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
PGK1-205ENST00000491291 TRPM1Q7Z4N2 1603 aa12.84□□□□□ -0.35
PGK1-205ENST00000491291 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
PGK1-205ENST00000491291 ZFYVE9O95405 1425 aa12.83□□□□□ -0.36
PGK1-205ENST00000491291 PRAG1Q86YV5 1406 aa12.83□□□□□ -0.36
PGK1-205ENST00000491291 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
PGK1-205ENST00000491291 ARHGAP23Q9P227 1491 aa12.83□□□□□ -0.36
PGK1-205ENST00000491291 LAMC1P11047 1609 aa12.82□□□□□ -0.36
PGK1-205ENST00000491291 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
PGK1-205ENST00000491291 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
PGK1-205ENST00000491291 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
PGK1-205ENST00000491291 NRXN1Q9ULB1 1477 aa12.82□□□□□ -0.36
PGK1-205ENST00000491291 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
PGK1-205ENST00000491291 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
PGK1-205ENST00000491291 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
PGK1-205ENST00000491291 EID1Q9Y6B2 187 aa12.8□□□□□ -0.36
PGK1-205ENST00000491291 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
PGK1-205ENST00000491291 LMTK3Q96Q04 1460 aa12.79□□□□□ -0.36
PGK1-205ENST00000491291 SCAF11Q99590 1463 aaKnown RBP12.79□□□□□ -0.36
PGK1-205ENST00000491291 TXNDC2Q86VQ3 553 aa12.79□□□□□ -0.36
PGK1-205ENST00000491291 RALGAPBQ86X10 1494 aa12.78□□□□□ -0.36
PGK1-205ENST00000491291 NRXN3Q9Y4C0 1643 aa12.78□□□□□ -0.36
PGK1-205ENST00000491291 SETBP1Q9Y6X0 1596 aa12.77□□□□□ -0.36
PGK1-205ENST00000491291 SETD1AO15047 1707 aaKnown RBP12.77□□□□□ -0.36
PGK1-205ENST00000491291 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.37
PGK1-205ENST00000491291 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
PGK1-205ENST00000491291 LTKP29376 864 aa12.76□□□□□ -0.37
PGK1-205ENST00000491291 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
PGK1-205ENST00000491291 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
PGK1-205ENST00000491291 BCANQ96GW7 911 aa12.75□□□□□ -0.37
PGK1-205ENST00000491291 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
PGK1-205ENST00000491291 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
PGK1-205ENST00000491291 HSPA2P54652 639 aa12.74□□□□□ -0.37
PGK1-205ENST00000491291 CFAP70Q5T0N1 1121 aa12.74□□□□□ -0.37
PGK1-205ENST00000491291 C14orf93Q9H972 538 aaKnown RBP12.74□□□□□ -0.37
PGK1-205ENST00000491291 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
PGK1-205ENST00000491291 NPHP4O75161 1426 aaPredicted RBP12.72□□□□□ -0.37
PGK1-205ENST00000491291 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
PGK1-205ENST00000491291 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
PGK1-205ENST00000491291 MED14O60244 1454 aa12.72□□□□□ -0.37
PGK1-205ENST00000491291 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
PGK1-205ENST00000491291 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
PGK1-205ENST00000491291 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
PGK1-205ENST00000491291 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
PGK1-205ENST00000491291 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.38
PGK1-205ENST00000491291 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
PGK1-205ENST00000491291 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
PGK1-205ENST00000491291 CHD2O14647 1828 aaKnown RBP12.68□□□□□ -0.38
PGK1-205ENST00000491291 TMEM132EQ6IEE7 984 aa12.68□□□□□ -0.38
PGK1-205ENST00000491291 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
PGK1-205ENST00000491291 TBX22Q9Y458 520 aa12.67□□□□□ -0.38
PGK1-205ENST00000491291 METP08581 1390 aa12.67□□□□□ -0.38
PGK1-205ENST00000491291 USP47Q96K76 1375 aa12.67□□□□□ -0.38
PGK1-205ENST00000491291 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
PGK1-205ENST00000491291 EIF4G2P78344 907 aaKnown RBP eCLIP12.66□□□□□ -0.383e-16■■■■□ 22.7
PGK1-205ENST00000491291 QRICH2Q9H0J4 1663 aa12.65□□□□□ -0.38
PGK1-205ENST00000491291 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
PGK1-205ENST00000491291 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
PGK1-205ENST00000491291 STK26Q9P289 416 aa12.64□□□□□ -0.39
PGK1-205ENST00000491291 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
PGK1-205ENST00000491291 LRPPRCP42704 1394 aaKnown RBP12.64□□□□□ -0.39
PGK1-205ENST00000491291 PIK3R4Q99570 1358 aa12.64□□□□□ -0.39
PGK1-205ENST00000491291 CPS1P31327 1500 aa12.63□□□□□ -0.39
PGK1-205ENST00000491291 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
PGK1-205ENST00000491291 HSPA5P11021 654 aaKnown RBP12.63□□□□□ -0.39
PGK1-205ENST00000491291 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
PGK1-205ENST00000491291 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
PGK1-205ENST00000491291 ABCC11Q96J66 1382 aa12.61□□□□□ -0.39
PGK1-205ENST00000491291 TECPR2O15040 1411 aa12.61□□□□□ -0.39
PGK1-205ENST00000491291 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
PGK1-205ENST00000491291 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
PGK1-205ENST00000491291 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
PGK1-205ENST00000491291 STRCP1A6NGW2 1772 aa12.6□□□□□ -0.39
PGK1-205ENST00000491291 ST20-MTHFSA0A0A6YYL1 179 aa12.59□□□□□ -0.39
PGK1-205ENST00000491291 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
PGK1-205ENST00000491291 KCNA6P17658 529 aa12.58□□□□□ -0.4
PGK1-205ENST00000491291 PTCH1Q13635 1447 aa12.58□□□□□ -0.4
PGK1-205ENST00000491291 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
PGK1-205ENST00000491291 POGKQ9P215 609 aa12.58□□□□□ -0.4
PGK1-205ENST00000491291 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
PGK1-205ENST00000491291 PRAM1Q96QH2 718 aa12.57□□□□□ -0.4
PGK1-205ENST00000491291 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
PGK1-205ENST00000491291 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
PGK1-205ENST00000491291 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
PGK1-205ENST00000491291 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
PGK1-205ENST00000491291 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
PGK1-205ENST00000491291 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
PGK1-205ENST00000491291 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
PGK1-205ENST00000491291 SBNO2Q9Y2G9 1366 aa12.55□□□□□ -0.4
PGK1-205ENST00000491291 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
PGK1-205ENST00000491291 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
PGK1-205ENST00000491291 ADGRB2O60241 1585 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms