RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 PRDM15P57071 1507 aaPredicted RBP13.26□□□□□ -0.29
HPS4-215ENST00000491142 HRCP23327 699 aa13.25□□□□□ -0.29
HPS4-215ENST00000491142 TET3O43151 1660 aa13.24□□□□□ -0.29
HPS4-215ENST00000491142 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
HPS4-215ENST00000491142 ABCC5O15440 1437 aa13.24□□□□□ -0.29
HPS4-215ENST00000491142 ERBINQ96RT1 1412 aa13.24□□□□□ -0.29
HPS4-215ENST00000491142 VPS8Q8N3P4 1428 aa13.23□□□□□ -0.29
HPS4-215ENST00000491142 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
HPS4-215ENST00000491142 SLAIN2Q9P270 581 aa13.23□□□□□ -0.29
HPS4-215ENST00000491142 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
HPS4-215ENST00000491142 KANK1Q14678 1352 aa13.22□□□□□ -0.29
HPS4-215ENST00000491142 BCANQ96GW7 911 aa13.22□□□□□ -0.29
HPS4-215ENST00000491142 MSH6P52701 1360 aa13.2□□□□□ -0.3
HPS4-215ENST00000491142 JCADQ9P266 1359 aa13.2□□□□□ -0.3
HPS4-215ENST00000491142 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
HPS4-215ENST00000491142 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
HPS4-215ENST00000491142 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
HPS4-215ENST00000491142 NOS1P29475 1434 aa13.19□□□□□ -0.3
HPS4-215ENST00000491142 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
HPS4-215ENST00000491142 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
HPS4-215ENST00000491142 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
HPS4-215ENST00000491142 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
HPS4-215ENST00000491142 DAPK1P53355 1430 aa13.18□□□□□ -0.3
HPS4-215ENST00000491142 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
HPS4-215ENST00000491142 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
HPS4-215ENST00000491142 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
HPS4-215ENST00000491142 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
HPS4-215ENST00000491142 LRP6O75581 1613 aa13.15□□□□□ -0.3
HPS4-215ENST00000491142 PTPN23Q9H3S7 1636 aa13.15□□□□□ -0.3
HPS4-215ENST00000491142 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
HPS4-215ENST00000491142 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
HPS4-215ENST00000491142 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
HPS4-215ENST00000491142 ANKRD30AQ9BXX3 1397 aa13.14□□□□□ -0.31
HPS4-215ENST00000491142 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
HPS4-215ENST00000491142 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
HPS4-215ENST00000491142 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
HPS4-215ENST00000491142 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
HPS4-215ENST00000491142 CAPN15O75808 1086 aa13.13□□□□□ -0.31
HPS4-215ENST00000491142 ZNF772Q68DY9 489 aaPredicted RBP13.13□□□□□ -0.31
HPS4-215ENST00000491142 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
HPS4-215ENST00000491142 CHD2O14647 1828 aaKnown RBP13.12□□□□□ -0.31
HPS4-215ENST00000491142 TBX22Q9Y458 520 aa13.12□□□□□ -0.31
HPS4-215ENST00000491142 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
HPS4-215ENST00000491142 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
HPS4-215ENST00000491142 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
HPS4-215ENST00000491142 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
HPS4-215ENST00000491142 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
HPS4-215ENST00000491142 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
HPS4-215ENST00000491142 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
HPS4-215ENST00000491142 ATF3P18847 181 aa13.09□□□□□ -0.31
HPS4-215ENST00000491142 RXRBP28702 533 aa13.09□□□□□ -0.31
HPS4-215ENST00000491142 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
HPS4-215ENST00000491142 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
HPS4-215ENST00000491142 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
HPS4-215ENST00000491142 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
HPS4-215ENST00000491142 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
HPS4-215ENST00000491142 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
HPS4-215ENST00000491142 RPRD2Q5VT52 1461 aaKnown RBP13.08□□□□□ -0.32
HPS4-215ENST00000491142 ADAMTS13Q76LX8 1427 aa13.07□□□□□ -0.32
HPS4-215ENST00000491142 TMEM131LA2VDJ0 1609 aa13.07□□□□□ -0.32
HPS4-215ENST00000491142 APLP2Q06481 763 aa13.07□□□□□ -0.32
HPS4-215ENST00000491142 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
HPS4-215ENST00000491142 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
HPS4-215ENST00000491142 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
HPS4-215ENST00000491142 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
HPS4-215ENST00000491142 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
HPS4-215ENST00000491142 ADGRL2O95490 1459 aa13.05□□□□□ -0.32
HPS4-215ENST00000491142 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
HPS4-215ENST00000491142 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
HPS4-215ENST00000491142 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
HPS4-215ENST00000491142 FAM50AQ14320 339 aaKnown RBP13.04□□□□□ -0.32
HPS4-215ENST00000491142 AFF2P51816 1311 aa13.04□□□□□ -0.32
HPS4-215ENST00000491142 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
HPS4-215ENST00000491142 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
HPS4-215ENST00000491142 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
HPS4-215ENST00000491142 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
HPS4-215ENST00000491142 DSG3P32926 999 aa13.01□□□□□ -0.33
HPS4-215ENST00000491142 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
HPS4-215ENST00000491142 DDX17Q92841 729 aaKnown RBP13□□□□□ -0.33
HPS4-215ENST00000491142 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
HPS4-215ENST00000491142 ASXL1Q8IXJ9 1541 aa12.99□□□□□ -0.33
HPS4-215ENST00000491142 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
HPS4-215ENST00000491142 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
HPS4-215ENST00000491142 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
HPS4-215ENST00000491142 TRPM2O94759 1503 aa12.98□□□□□ -0.33
HPS4-215ENST00000491142 RGS12O14924 1447 aa12.98□□□□□ -0.33
HPS4-215ENST00000491142 ZEB1P37275 1124 aaPredicted RBP12.98□□□□□ -0.33
HPS4-215ENST00000491142 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
HPS4-215ENST00000491142 DCCP43146 1447 aa12.97□□□□□ -0.33
HPS4-215ENST00000491142 MST1RQ04912 1400 aa12.97□□□□□ -0.33
HPS4-215ENST00000491142 E9PCH4 1651 aa12.97□□□□□ -0.33
HPS4-215ENST00000491142 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
HPS4-215ENST00000491142 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
HPS4-215ENST00000491142 UNC13BO14795 1591 aa12.96□□□□□ -0.33
HPS4-215ENST00000491142 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
HPS4-215ENST00000491142 METP08581 1390 aa12.94□□□□□ -0.34
HPS4-215ENST00000491142 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
HPS4-215ENST00000491142 PPARGC1BQ86YN6 1023 aaKnown RBP12.94□□□□□ -0.34
HPS4-215ENST00000491142 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
HPS4-215ENST00000491142 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms