RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 STAC3Q96MF2 364 aa26.84■■□□□ 1.89
MCF2L-230ENST00000491028 MYOM2P54296 1465 aa26.84■■□□□ 1.89
MCF2L-230ENST00000491028 THEMISQ8N1K5 641 aaPredicted RBP26.83■■□□□ 1.89
MCF2L-230ENST00000491028 ARHGAP23Q9P227 1491 aa26.82■■□□□ 1.88
MCF2L-230ENST00000491028 TMEM2Q9UHN6 1383 aa26.82■■□□□ 1.88
MCF2L-230ENST00000491028 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
MCF2L-230ENST00000491028 RIMS2Q9UQ26 1411 aa26.81■■□□□ 1.88
MCF2L-230ENST00000491028 DCAF11Q8TEB1 546 aa26.79■■□□□ 1.88
MCF2L-230ENST00000491028 LMTK3Q96Q04 1460 aa26.78■■□□□ 1.88
MCF2L-230ENST00000491028 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
MCF2L-230ENST00000491028 HDGFP51858 240 aaKnown RBP26.76■■□□□ 1.87
MCF2L-230ENST00000491028 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.76■■□□□ 1.87
MCF2L-230ENST00000491028 VGFO15240 615 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-230ENST00000491028 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
MCF2L-230ENST00000491028 KDM2AQ9Y2K7 1162 aa26.72■■□□□ 1.87
MCF2L-230ENST00000491028 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
MCF2L-230ENST00000491028 PRAG1Q86YV5 1406 aa26.72■■□□□ 1.87
MCF2L-230ENST00000491028 SCAF11Q99590 1463 aaKnown RBP26.71■■□□□ 1.87
MCF2L-230ENST00000491028 EID1Q9Y6B2 187 aa26.7■■□□□ 1.86
MCF2L-230ENST00000491028 PIK3C2GO75747 1445 aa26.69■■□□□ 1.86
MCF2L-230ENST00000491028 ILDR1Q86SU0 546 aaPredicted RBP26.69■■□□□ 1.86
MCF2L-230ENST00000491028 LAMC1P11047 1609 aa26.68■■□□□ 1.86
MCF2L-230ENST00000491028 KIAA1210Q9ULL0 1709 aa26.68■■□□□ 1.86
MCF2L-230ENST00000491028 ADGRF5Q8IZF2 1346 aa26.67■■□□□ 1.86
MCF2L-230ENST00000491028 TRPM1Q7Z4N2 1603 aa26.66■■□□□ 1.86
MCF2L-230ENST00000491028 TXNDC2Q86VQ3 553 aa26.66■■□□□ 1.86
MCF2L-230ENST00000491028 PLEKHG1Q9ULL1 1385 aa26.66■■□□□ 1.86
MCF2L-230ENST00000491028 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
MCF2L-230ENST00000491028 LTKP29376 864 aa26.64■■□□□ 1.86
MCF2L-230ENST00000491028 NUTM2DQ5VT03 806 aaPredicted RBP26.64■■□□□ 1.86
MCF2L-230ENST00000491028 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
MCF2L-230ENST00000491028 NRXN3Q9Y4C0 1643 aa26.63■■□□□ 1.85
MCF2L-230ENST00000491028 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
MCF2L-230ENST00000491028 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
MCF2L-230ENST00000491028 NBPF8Q3BBV2 869 aa26.62■■□□□ 1.85
MCF2L-230ENST00000491028 MED14O60244 1454 aa26.62■■□□□ 1.85
MCF2L-230ENST00000491028 DIP2AQ14689 1571 aa26.59■■□□□ 1.85
MCF2L-230ENST00000491028 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
MCF2L-230ENST00000491028 ALKQ9UM73 1620 aa26.58■■□□□ 1.85
MCF2L-230ENST00000491028 HSPA2P54652 639 aa26.57■■□□□ 1.84
MCF2L-230ENST00000491028 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
MCF2L-230ENST00000491028 C14orf93Q9H972 538 aaKnown RBP26.55■■□□□ 1.84
MCF2L-230ENST00000491028 STRCQ7RTU9 1775 aa26.55■■□□□ 1.84
MCF2L-230ENST00000491028 ADAMTS13Q76LX8 1427 aa26.54■■□□□ 1.84
MCF2L-230ENST00000491028 GPRASP1Q5JY77 1395 aa26.52■■□□□ 1.84
MCF2L-230ENST00000491028 NCKAP5LQ9HCH0 1330 aa26.52■■□□□ 1.84
MCF2L-230ENST00000491028 ADGRB1O14514 1584 aa26.51■■□□□ 1.83
MCF2L-230ENST00000491028 ROCK2O75116 1388 aaKnown RBP26.51■■□□□ 1.83
MCF2L-230ENST00000491028 CFAP70Q5T0N1 1121 aa26.51■■□□□ 1.83
MCF2L-230ENST00000491028 BCANQ96GW7 911 aa26.5■■□□□ 1.83
MCF2L-230ENST00000491028 ASXL1Q8IXJ9 1541 aa26.49■■□□□ 1.83
MCF2L-230ENST00000491028 TBX22Q9Y458 520 aa26.47■■□□□ 1.83
MCF2L-230ENST00000491028 NBPF1Q3BBV0 1214 aa26.44■■□□□ 1.82
MCF2L-230ENST00000491028 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
MCF2L-230ENST00000491028 PIK3R4Q99570 1358 aa26.44■■□□□ 1.82
MCF2L-230ENST00000491028 KNDC1Q76NI1 1749 aa26.42■■□□□ 1.82
MCF2L-230ENST00000491028 SLC26A8Q96RN1 970 aa26.42■■□□□ 1.82
MCF2L-230ENST00000491028 CARD11Q9BXL7 1154 aa26.42■■□□□ 1.82
MCF2L-230ENST00000491028 METP08581 1390 aa26.41■■□□□ 1.82
MCF2L-230ENST00000491028 YTHDC2Q9H6S0 1430 aaKnown RBP26.39■■□□□ 1.82
MCF2L-230ENST00000491028 LRPPRCP42704 1394 aaKnown RBP26.38■■□□□ 1.81
MCF2L-230ENST00000491028 CHD2O14647 1828 aaKnown RBP26.38■■□□□ 1.81
MCF2L-230ENST00000491028 XRN1Q8IZH2 1706 aaKnown RBP26.37■■□□□ 1.81
MCF2L-230ENST00000491028 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
MCF2L-230ENST00000491028 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
MCF2L-230ENST00000491028 DLC1Q96QB1 1528 aa26.36■■□□□ 1.81
MCF2L-230ENST00000491028 NWD1Q149M9 1564 aa26.36■■□□□ 1.81
MCF2L-230ENST00000491028 ARHGEF28Q8N1W1 1705 aaKnown RBP26.36■■□□□ 1.81
MCF2L-230ENST00000491028 CPS1P31327 1500 aa26.35■■□□□ 1.81
MCF2L-230ENST00000491028 TECPR2O15040 1411 aa26.35■■□□□ 1.81
MCF2L-230ENST00000491028 EIF3AQ14152 1382 aaKnown RBP26.34■■□□□ 1.81
MCF2L-230ENST00000491028 USP47Q96K76 1375 aa26.34■■□□□ 1.81
MCF2L-230ENST00000491028 ABCC11Q96J66 1382 aa26.33■■□□□ 1.81
MCF2L-230ENST00000491028 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
MCF2L-230ENST00000491028 EIF4G2P78344 907 aaKnown RBP eCLIP26.3■■□□□ 1.8
MCF2L-230ENST00000491028 PTCH1Q13635 1447 aa26.3■■□□□ 1.8
MCF2L-230ENST00000491028 TRAK1Q9UPV9 953 aa26.28■■□□□ 1.8
MCF2L-230ENST00000491028 STK26Q9P289 416 aa26.27■■□□□ 1.8
MCF2L-230ENST00000491028 FAM135BQ49AJ0 1406 aa26.27■■□□□ 1.8
MCF2L-230ENST00000491028 NKTRP30414 1462 aaKnown RBP26.26■■□□□ 1.79
MCF2L-230ENST00000491028 SIRT1Q96EB6 747 aa26.26■■□□□ 1.79
MCF2L-230ENST00000491028 AMOTL2Q9Y2J4 779 aa26.26■■□□□ 1.79
MCF2L-230ENST00000491028 KCNA6P17658 529 aa26.25■■□□□ 1.79
MCF2L-230ENST00000491028 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
MCF2L-230ENST00000491028 HSPA5P11021 654 aaKnown RBP26.23■■□□□ 1.79
MCF2L-230ENST00000491028 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
MCF2L-230ENST00000491028 CENPJQ9HC77 1338 aaPredicted RBP26.21■■□□□ 1.79
MCF2L-230ENST00000491028 FBXO41Q8TF61 875 aa26.21■■□□□ 1.79
MCF2L-230ENST00000491028 ROBO2Q9HCK4 1378 aa26.2■■□□□ 1.79
MCF2L-230ENST00000491028 SBNO2Q9Y2G9 1366 aa26.2■■□□□ 1.79
MCF2L-230ENST00000491028 ST20-MTHFSA0A0A6YYL1 179 aa26.19■■□□□ 1.78
MCF2L-230ENST00000491028 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
MCF2L-230ENST00000491028 POGKQ9P215 609 aa26.17■■□□□ 1.78
MCF2L-230ENST00000491028 SLC24A1O60721 1099 aa26.15■■□□□ 1.78
MCF2L-230ENST00000491028 PLEKHH1Q9ULM0 1364 aa26.14■■□□□ 1.78
MCF2L-230ENST00000491028 ADGRB2O60241 1585 aa26.14■■□□□ 1.78
MCF2L-230ENST00000491028 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
MCF2L-230ENST00000491028 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.12■■□□□ 1.77
MCF2L-230ENST00000491028 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
MCF2L-230ENST00000491028 TESK2Q96S53 571 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms