RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
HDAC9-225ENST00000490851 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
HDAC9-225ENST00000490851 ARID4BQ4LE39 1312 aaPredicted RBP13.96□□□□□ -0.17
HDAC9-225ENST00000490851 ADGRF5Q8IZF2 1346 aa13.96□□□□□ -0.17
HDAC9-225ENST00000490851 NUTM2DQ5VT03 806 aaPredicted RBP13.95□□□□□ -0.18
HDAC9-225ENST00000490851 SYNMO15061 1565 aa13.95□□□□□ -0.18
HDAC9-225ENST00000490851 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
HDAC9-225ENST00000490851 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
HDAC9-225ENST00000490851 ADGRB3O60242 1522 aa13.94□□□□□ -0.18
HDAC9-225ENST00000490851 NOS1P29475 1434 aa13.94□□□□□ -0.18
HDAC9-225ENST00000490851 REREQ9P2R6 1566 aa13.93□□□□□ -0.18
HDAC9-225ENST00000490851 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
HDAC9-225ENST00000490851 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
HDAC9-225ENST00000490851 CLTCQ00610 1675 aaKnown RBP13.92□□□□□ -0.18
HDAC9-225ENST00000490851 IDI1Q13907 227 aa13.92□□□□□ -0.18
HDAC9-225ENST00000490851 AGLP35573 1532 aa13.92□□□□□ -0.18
HDAC9-225ENST00000490851 ESF1Q9H501 851 aaKnown RBP13.91□□□□□ -0.18
HDAC9-225ENST00000490851 PREX1Q8TCU6 1659 aa13.91□□□□□ -0.18
HDAC9-225ENST00000490851 NEURL4Q96JN8 1562 aa13.9□□□□□ -0.18
HDAC9-225ENST00000490851 LAMC1P11047 1609 aa13.9□□□□□ -0.18
HDAC9-225ENST00000490851 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
HDAC9-225ENST00000490851 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
HDAC9-225ENST00000490851 MYOM2P54296 1465 aa13.89□□□□□ -0.19
HDAC9-225ENST00000490851 PIK3C2BO00750 1634 aa13.89□□□□□ -0.19
HDAC9-225ENST00000490851 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
HDAC9-225ENST00000490851 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
HDAC9-225ENST00000490851 TESK2Q96S53 571 aa13.87□□□□□ -0.19
HDAC9-225ENST00000490851 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
HDAC9-225ENST00000490851 PPLO60437 1756 aa13.87□□□□□ -0.19
HDAC9-225ENST00000490851 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
HDAC9-225ENST00000490851 PKNOX2Q96KN3 472 aa13.86□□□□□ -0.19
HDAC9-225ENST00000490851 CCER2I3L3R5 266 aa13.85□□□□□ -0.19
HDAC9-225ENST00000490851 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
HDAC9-225ENST00000490851 PPP6R1Q9UPN7 881 aa13.85□□□□□ -0.19
HDAC9-225ENST00000490851 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
HDAC9-225ENST00000490851 MYO5BQ9ULV0 1848 aa13.85□□□□□ -0.19
HDAC9-225ENST00000490851 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
HDAC9-225ENST00000490851 TMEM132EQ6IEE7 984 aa13.84□□□□□ -0.19
HDAC9-225ENST00000490851 TMF1P82094 1093 aa13.84□□□□□ -0.19
HDAC9-225ENST00000490851 HOMEZQ8IX15 550 aa13.84□□□□□ -0.19
HDAC9-225ENST00000490851 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
HDAC9-225ENST00000490851 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.19
HDAC9-225ENST00000490851 PRKRIP1Q9H875 184 aaPredicted RBP13.83□□□□□ -0.19
HDAC9-225ENST00000490851 KIAA1210Q9ULL0 1709 aa13.83□□□□□ -0.2
HDAC9-225ENST00000490851 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
HDAC9-225ENST00000490851 NEXMIFQ5QGS0 1516 aa13.83□□□□□ -0.2
HDAC9-225ENST00000490851 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
HDAC9-225ENST00000490851 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
HDAC9-225ENST00000490851 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
HDAC9-225ENST00000490851 EIF3AQ14152 1382 aaKnown RBP13.82□□□□□ -0.2
HDAC9-225ENST00000490851 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
HDAC9-225ENST00000490851 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
HDAC9-225ENST00000490851 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
HDAC9-225ENST00000490851 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
HDAC9-225ENST00000490851 ANO8Q9HCE9 1232 aaPredicted RBP13.79□□□□□ -0.2
HDAC9-225ENST00000490851 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
HDAC9-225ENST00000490851 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
HDAC9-225ENST00000490851 STK26Q9P289 416 aa13.77□□□□□ -0.21
HDAC9-225ENST00000490851 PANK3Q9H999 370 aa13.76□□□□□ -0.21
HDAC9-225ENST00000490851 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
HDAC9-225ENST00000490851 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
HDAC9-225ENST00000490851 CENPJQ9HC77 1338 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-225ENST00000490851 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC9-225ENST00000490851 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
HDAC9-225ENST00000490851 TNRQ92752 1358 aa13.75□□□□□ -0.21
HDAC9-225ENST00000490851 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
HDAC9-225ENST00000490851 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
HDAC9-225ENST00000490851 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
HDAC9-225ENST00000490851 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
HDAC9-225ENST00000490851 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
HDAC9-225ENST00000490851 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
HDAC9-225ENST00000490851 ZFYVE9O95405 1425 aa13.72□□□□□ -0.21
HDAC9-225ENST00000490851 NEFLP07196 543 aa13.72□□□□□ -0.21
HDAC9-225ENST00000490851 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.21
HDAC9-225ENST00000490851 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
HDAC9-225ENST00000490851 BCANQ96GW7 911 aa13.7□□□□□ -0.22
HDAC9-225ENST00000490851 FER1L4A9Z1Z3 1794 aa13.7□□□□□ -0.22
HDAC9-225ENST00000490851 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
HDAC9-225ENST00000490851 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-225ENST00000490851 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC9-225ENST00000490851 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
HDAC9-225ENST00000490851 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-225ENST00000490851 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
HDAC9-225ENST00000490851 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
HDAC9-225ENST00000490851 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
HDAC9-225ENST00000490851 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
HDAC9-225ENST00000490851 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
HDAC9-225ENST00000490851 C3P01024 1663 aa13.67□□□□□ -0.22
HDAC9-225ENST00000490851 MYOM1P52179 1685 aa13.67□□□□□ -0.22
HDAC9-225ENST00000490851 KNSTRNQ9Y448 316 aa13.66□□□□□ -0.22
HDAC9-225ENST00000490851 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
HDAC9-225ENST00000490851 POGKQ9P215 609 aa13.66□□□□□ -0.22
HDAC9-225ENST00000490851 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
HDAC9-225ENST00000490851 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
HDAC9-225ENST00000490851 RALBP1Q15311 655 aa13.65□□□□□ -0.22
HDAC9-225ENST00000490851 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
HDAC9-225ENST00000490851 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
HDAC9-225ENST00000490851 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
HDAC9-225ENST00000490851 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.64□□□□□ -0.23
HDAC9-225ENST00000490851 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms