RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
LMNB2-203ENST00000490554 BCANQ96GW7 911 aa24.1■■□□□ 1.45
LMNB2-203ENST00000490554 FAM50AQ14320 339 aaKnown RBP24.09■■□□□ 1.45
LMNB2-203ENST00000490554 ZFYVE9O95405 1425 aa24.09■■□□□ 1.45
LMNB2-203ENST00000490554 ROBO1Q9Y6N7 1651 aa24.08■■□□□ 1.45
LMNB2-203ENST00000490554 MSH6P52701 1360 aa24.07■■□□□ 1.44
LMNB2-203ENST00000490554 PLEKHG1Q9ULL1 1385 aa24.07■■□□□ 1.44
LMNB2-203ENST00000490554 RIMS2Q9UQ26 1411 aa24.05■■□□□ 1.44
LMNB2-203ENST00000490554 POTEAQ6S8J7 498 aa24.05■■□□□ 1.44
LMNB2-203ENST00000490554 SLAIN2Q9P270 581 aa24.05■■□□□ 1.44
LMNB2-203ENST00000490554 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
LMNB2-203ENST00000490554 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
LMNB2-203ENST00000490554 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
LMNB2-203ENST00000490554 TMEM131LA2VDJ0 1609 aa24■■□□□ 1.43
LMNB2-203ENST00000490554 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.98■■□□□ 1.43
LMNB2-203ENST00000490554 CHD2O14647 1828 aaKnown RBP23.98■■□□□ 1.43
LMNB2-203ENST00000490554 GCC2Q8IWJ2 1684 aa23.97■■□□□ 1.43
LMNB2-203ENST00000490554 JCADQ9P266 1359 aa23.97■■□□□ 1.43
LMNB2-203ENST00000490554 MYO5BQ9ULV0 1848 aa23.97■■□□□ 1.43
LMNB2-203ENST00000490554 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
LMNB2-203ENST00000490554 CHGAP10645 457 aaKnown RBP23.96■■□□□ 1.43
LMNB2-203ENST00000490554 UNC13BO14795 1591 aa23.95■■□□□ 1.43
LMNB2-203ENST00000490554 ADAMTS13Q76LX8 1427 aa23.95■■□□□ 1.42
LMNB2-203ENST00000490554 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
LMNB2-203ENST00000490554 NUTM2DQ5VT03 806 aaPredicted RBP23.92■■□□□ 1.42
LMNB2-203ENST00000490554 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
LMNB2-203ENST00000490554 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
LMNB2-203ENST00000490554 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
LMNB2-203ENST00000490554 E9PCH4 1651 aa23.89■■□□□ 1.42
LMNB2-203ENST00000490554 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
LMNB2-203ENST00000490554 COL16A1Q07092 1604 aaPredicted RBP23.88■■□□□ 1.41
LMNB2-203ENST00000490554 DIP2AQ14689 1571 aa23.88■■□□□ 1.41
LMNB2-203ENST00000490554 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
LMNB2-203ENST00000490554 IQGAP3Q86VI3 1631 aa23.86■■□□□ 1.41
LMNB2-203ENST00000490554 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
LMNB2-203ENST00000490554 ATF3P18847 181 aa23.85■■□□□ 1.41
LMNB2-203ENST00000490554 NUP155O75694 1391 aa23.85■■□□□ 1.41
LMNB2-203ENST00000490554 AMOTL2Q9Y2J4 779 aa23.83■■□□□ 1.41
LMNB2-203ENST00000490554 LRP6O75581 1613 aa23.83■■□□□ 1.41
LMNB2-203ENST00000490554 PTPRUQ92729 1446 aa23.83■■□□□ 1.4
LMNB2-203ENST00000490554 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.82■■□□□ 1.4
LMNB2-203ENST00000490554 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
LMNB2-203ENST00000490554 TRPM2O94759 1503 aa23.81■■□□□ 1.4
LMNB2-203ENST00000490554 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
LMNB2-203ENST00000490554 BRINP3Q76B58 766 aa23.78■■□□□ 1.4
LMNB2-203ENST00000490554 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
LMNB2-203ENST00000490554 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
LMNB2-203ENST00000490554 ITGAEP38570 1179 aa23.76■■□□□ 1.39
LMNB2-203ENST00000490554 DCCP43146 1447 aa23.76■■□□□ 1.39
LMNB2-203ENST00000490554 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
LMNB2-203ENST00000490554 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
LMNB2-203ENST00000490554 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
LMNB2-203ENST00000490554 XRN1Q8IZH2 1706 aaKnown RBP23.7■■□□□ 1.39
LMNB2-203ENST00000490554 METP08581 1390 aa23.7■■□□□ 1.38
LMNB2-203ENST00000490554 MST1RQ04912 1400 aa23.69■■□□□ 1.38
LMNB2-203ENST00000490554 ZNF326Q5BKZ1 582 aaKnown RBP23.69■■□□□ 1.38
LMNB2-203ENST00000490554 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
LMNB2-203ENST00000490554 TRIM52Q96A61 297 aa23.68■■□□□ 1.38
LMNB2-203ENST00000490554 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
LMNB2-203ENST00000490554 NUTM2BA6NNL0 878 aaPredicted RBP23.67■■□□□ 1.38
LMNB2-203ENST00000490554 NUTM2EB1AL46 878 aaPredicted RBP23.67■■□□□ 1.38
LMNB2-203ENST00000490554 NUTM2AQ8IVF1 878 aaPredicted RBP23.67■■□□□ 1.38
LMNB2-203ENST00000490554 UPF1Q92900 1129 aaKnown RBP eCLIP23.67■■□□□ 1.38
LMNB2-203ENST00000490554 SPHKAPQ2M3C7 1700 aa23.66■■□□□ 1.38
LMNB2-203ENST00000490554 RXRBP28702 533 aa23.65■■□□□ 1.38
LMNB2-203ENST00000490554 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
LMNB2-203ENST00000490554 LRRC59Q96AG4 307 aaKnown RBP23.63■■□□□ 1.37
LMNB2-203ENST00000490554 ADGRL3Q9HAR2 1447 aa23.63■■□□□ 1.37
LMNB2-203ENST00000490554 AFF2P51816 1311 aa23.6■■□□□ 1.37
LMNB2-203ENST00000490554 NEXMIFQ5QGS0 1516 aa23.6■■□□□ 1.37
LMNB2-203ENST00000490554 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
LMNB2-203ENST00000490554 CDK12Q9NYV4 1490 aaPredicted RBP23.6■■□□□ 1.37
LMNB2-203ENST00000490554 DDX17Q92841 729 aaKnown RBP23.59■■□□□ 1.37
LMNB2-203ENST00000490554 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
LMNB2-203ENST00000490554 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
LMNB2-203ENST00000490554 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
LMNB2-203ENST00000490554 NAIPQ13075 1403 aa23.53■■□□□ 1.36
LMNB2-203ENST00000490554 C8orf37Q96NL8 207 aa23.53■■□□□ 1.36
LMNB2-203ENST00000490554 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
LMNB2-203ENST00000490554 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
LMNB2-203ENST00000490554 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
LMNB2-203ENST00000490554 QTRT2Q9H974 415 aaKnown RBP23.51■■□□□ 1.35
LMNB2-203ENST00000490554 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
LMNB2-203ENST00000490554 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
LMNB2-203ENST00000490554 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
LMNB2-203ENST00000490554 SOS2Q07890 1332 aaPredicted RBP23.48■■□□□ 1.35
LMNB2-203ENST00000490554 RGS12O14924 1447 aa23.48■■□□□ 1.35
LMNB2-203ENST00000490554 PRAG1Q86YV5 1406 aa23.48■■□□□ 1.35
LMNB2-203ENST00000490554 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
LMNB2-203ENST00000490554 RPGRIP1LQ68CZ1 1315 aa23.47■■□□□ 1.35
LMNB2-203ENST00000490554 KIF1BO60333 1816 aa23.47■■□□□ 1.35
LMNB2-203ENST00000490554 LAMC1P11047 1609 aa23.46■■□□□ 1.35
LMNB2-203ENST00000490554 ADAMTS2O95450 1211 aa23.45■■□□□ 1.34
LMNB2-203ENST00000490554 NGLY1Q96IV0 654 aa23.45■■□□□ 1.34
LMNB2-203ENST00000490554 HFM1A2PYH4 1435 aa23.42■■□□□ 1.34
LMNB2-203ENST00000490554 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
LMNB2-203ENST00000490554 USP21Q9UK80 565 aa23.38■■□□□ 1.33
LMNB2-203ENST00000490554 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
LMNB2-203ENST00000490554 TRPC5Q9UL62 973 aaPredicted RBP23.36■■□□□ 1.33
LMNB2-203ENST00000490554 PPLO60437 1756 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms