RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 UNC13BO14795 1591 aa27.3■■□□□ 1.96
YIPF3-208ENST00000490447 ROCK1Q13464 1354 aa27.29■■□□□ 1.96
YIPF3-208ENST00000490447 GCC2Q8IWJ2 1684 aa27.28■■□□□ 1.96
YIPF3-208ENST00000490447 NKTRP30414 1462 aaKnown RBP27.27■■□□□ 1.96
YIPF3-208ENST00000490447 CHGAP10645 457 aaKnown RBP27.26■■□□□ 1.95
YIPF3-208ENST00000490447 RIMS2Q9UQ26 1411 aa27.26■■□□□ 1.95
YIPF3-208ENST00000490447 PLEKHG1Q9ULL1 1385 aa27.25■■□□□ 1.95
YIPF3-208ENST00000490447 ZFYVE9O95405 1425 aa27.25■■□□□ 1.95
YIPF3-208ENST00000490447 FAM135BQ49AJ0 1406 aa27.25■■□□□ 1.95
YIPF3-208ENST00000490447 ITGAEP38570 1179 aa27.24■■□□□ 1.95
YIPF3-208ENST00000490447 RBM33Q96EV2 1170 aaKnown RBP27.24■■□□□ 1.95
YIPF3-208ENST00000490447 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
YIPF3-208ENST00000490447 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.22■■□□□ 1.95
YIPF3-208ENST00000490447 TMEM131LA2VDJ0 1609 aa27.22■■□□□ 1.95
YIPF3-208ENST00000490447 MSH6P52701 1360 aa27.21■■□□□ 1.95
YIPF3-208ENST00000490447 IQGAP3Q86VI3 1631 aa27.2■■□□□ 1.94
YIPF3-208ENST00000490447 E9PCH4 1651 aa27.19■■□□□ 1.94
YIPF3-208ENST00000490447 NUP155O75694 1391 aa27.19■■□□□ 1.94
YIPF3-208ENST00000490447 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
YIPF3-208ENST00000490447 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
YIPF3-208ENST00000490447 ROBO1Q9Y6N7 1651 aa27.15■■□□□ 1.94
YIPF3-208ENST00000490447 TBX22Q9Y458 520 aa27.14■■□□□ 1.93
YIPF3-208ENST00000490447 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
YIPF3-208ENST00000490447 CHD2O14647 1828 aaKnown RBP27.1■■□□□ 1.93
YIPF3-208ENST00000490447 C14orf37Q86TY3 774 aa27.1■■□□□ 1.93
YIPF3-208ENST00000490447 SLAIN2Q9P270 581 aa27.1■■□□□ 1.93
YIPF3-208ENST00000490447 DIP2AQ14689 1571 aa27.09■■□□□ 1.93
YIPF3-208ENST00000490447 ADAMTS13Q76LX8 1427 aa27.06■■□□□ 1.92
YIPF3-208ENST00000490447 NCOA3Q9Y6Q9 1424 aa27.06■■□□□ 1.92
YIPF3-208ENST00000490447 PIK3R4Q99570 1358 aa27.05■■□□□ 1.92
YIPF3-208ENST00000490447 RGS17Q9UGC6 210 aaPredicted RBP27.02■■□□□ 1.92
YIPF3-208ENST00000490447 TRPM2O94759 1503 aa27.02■■□□□ 1.92
YIPF3-208ENST00000490447 ZNF326Q5BKZ1 582 aaKnown RBP27■■□□□ 1.91
YIPF3-208ENST00000490447 PHLPP1O60346 1717 aa26.99■■□□□ 1.91
YIPF3-208ENST00000490447 CADPS2Q86UW7 1296 aa26.99■■□□□ 1.91
YIPF3-208ENST00000490447 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
YIPF3-208ENST00000490447 ATF3P18847 181 aa26.98■■□□□ 1.91
YIPF3-208ENST00000490447 JCADQ9P266 1359 aa26.97■■□□□ 1.91
YIPF3-208ENST00000490447 C19orf44Q9H6X5 657 aa26.97■■□□□ 1.91
YIPF3-208ENST00000490447 AMOTL2Q9Y2J4 779 aa26.97■■□□□ 1.91
YIPF3-208ENST00000490447 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.9
YIPF3-208ENST00000490447 PTPRUQ92729 1446 aa26.91■■□□□ 1.9
YIPF3-208ENST00000490447 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.91■■□□□ 1.9
YIPF3-208ENST00000490447 SETBP1Q9Y6X0 1596 aa26.91■■□□□ 1.9
YIPF3-208ENST00000490447 NAIPQ13075 1403 aa26.89■■□□□ 1.89
YIPF3-208ENST00000490447 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.89
YIPF3-208ENST00000490447 POTEAQ6S8J7 498 aa26.89■■□□□ 1.89
YIPF3-208ENST00000490447 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
YIPF3-208ENST00000490447 CLTCL1P53675 1640 aa26.86■■□□□ 1.89
YIPF3-208ENST00000490447 DCCP43146 1447 aa26.85■■□□□ 1.89
YIPF3-208ENST00000490447 SPATA31A6Q5VVP1 1343 aa26.84■■□□□ 1.89
YIPF3-208ENST00000490447 AHDC1Q5TGY3 1603 aaPredicted RBP26.84■■□□□ 1.89
YIPF3-208ENST00000490447 TRIM52Q96A61 297 aa26.84■■□□□ 1.89
YIPF3-208ENST00000490447 XRN1Q8IZH2 1706 aaKnown RBP26.84■■□□□ 1.89
YIPF3-208ENST00000490447 MEX3CQ5U5Q3 659 aaKnown RBP26.83■■□□□ 1.89
YIPF3-208ENST00000490447 METP08581 1390 aa26.82■■□□□ 1.88
YIPF3-208ENST00000490447 NEXMIFQ5QGS0 1516 aa26.81■■□□□ 1.88
YIPF3-208ENST00000490447 BRINP3Q76B58 766 aa26.81■■□□□ 1.88
YIPF3-208ENST00000490447 HFM1A2PYH4 1435 aa26.79■■□□□ 1.88
YIPF3-208ENST00000490447 KIF1BO60333 1816 aa26.78■■□□□ 1.88
YIPF3-208ENST00000490447 SLC4A1APQ9BWU0 796 aaKnown RBP26.76■■□□□ 1.87
YIPF3-208ENST00000490447 LRP6O75581 1613 aa26.76■■□□□ 1.87
YIPF3-208ENST00000490447 VGFO15240 615 aaPredicted RBP26.75■■□□□ 1.87
YIPF3-208ENST00000490447 MST1RQ04912 1400 aa26.75■■□□□ 1.87
YIPF3-208ENST00000490447 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
YIPF3-208ENST00000490447 SHPRHQ149N8 1683 aa26.75■■□□□ 1.87
YIPF3-208ENST00000490447 ADGRL3Q9HAR2 1447 aa26.74■■□□□ 1.87
YIPF3-208ENST00000490447 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
YIPF3-208ENST00000490447 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.86
YIPF3-208ENST00000490447 NUTM2BA6NNL0 878 aaPredicted RBP26.68■■□□□ 1.86
YIPF3-208ENST00000490447 NUTM2EB1AL46 878 aaPredicted RBP26.68■■□□□ 1.86
YIPF3-208ENST00000490447 NUTM2AQ8IVF1 878 aaPredicted RBP26.68■■□□□ 1.86
YIPF3-208ENST00000490447 SETD5Q9C0A6 1442 aa26.67■■□□□ 1.86
YIPF3-208ENST00000490447 PTCH1Q13635 1447 aa26.66■■□□□ 1.86
YIPF3-208ENST00000490447 NALCNQ8IZF0 1738 aa26.66■■□□□ 1.86
YIPF3-208ENST00000490447 LRRC59Q96AG4 307 aaKnown RBP26.66■■□□□ 1.86
YIPF3-208ENST00000490447 NHSL1Q5SYE7 1610 aa26.65■■□□□ 1.86
YIPF3-208ENST00000490447 SETD1AO15047 1707 aaKnown RBP26.63■■□□□ 1.85
YIPF3-208ENST00000490447 ROBO2Q9HCK4 1378 aa26.61■■□□□ 1.85
YIPF3-208ENST00000490447 C1orf167Q5SNV9 1468 aa26.6■■□□□ 1.85
YIPF3-208ENST00000490447 DDX17Q92841 729 aaKnown RBP26.6■■□□□ 1.85
YIPF3-208ENST00000490447 FOXD1Q16676 465 aa26.59■■□□□ 1.85
YIPF3-208ENST00000490447 CCDC144AA2RUR9 1427 aa26.59■■□□□ 1.85
YIPF3-208ENST00000490447 PPLO60437 1756 aa26.57■■□□□ 1.84
YIPF3-208ENST00000490447 RXRBP28702 533 aa26.57■■□□□ 1.84
YIPF3-208ENST00000490447 AFF2P51816 1311 aa26.57■■□□□ 1.84
YIPF3-208ENST00000490447 PRAG1Q86YV5 1406 aa26.56■■□□□ 1.84
YIPF3-208ENST00000490447 PNPLA6Q8IY17 1366 aa26.55■■□□□ 1.84
YIPF3-208ENST00000490447 C8orf37Q96NL8 207 aa26.53■■□□□ 1.84
YIPF3-208ENST00000490447 RGL3Q3MIN7 710 aa26.52■■□□□ 1.84
YIPF3-208ENST00000490447 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
YIPF3-208ENST00000490447 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
YIPF3-208ENST00000490447 ANKRD30BQ9BXX2 1392 aa26.48■■□□□ 1.83
YIPF3-208ENST00000490447 ADGRF5Q8IZF2 1346 aa26.48■■□□□ 1.83
YIPF3-208ENST00000490447 CDK12Q9NYV4 1490 aaPredicted RBP26.48■■□□□ 1.83
YIPF3-208ENST00000490447 SOS2Q07890 1332 aaPredicted RBP26.47■■□□□ 1.83
YIPF3-208ENST00000490447 LAMC1P11047 1609 aa26.47■■□□□ 1.83
YIPF3-208ENST00000490447 SPATA31E1Q6ZUB1 1445 aa26.46■■□□□ 1.83
YIPF3-208ENST00000490447 ADAMTS2O95450 1211 aa26.45■■□□□ 1.83
YIPF3-208ENST00000490447 UPF1Q92900 1129 aaKnown RBP eCLIP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms