RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
FAM3D-204ENST00000489857 NKTRP30414 1462 aaKnown RBP23.34■■□□□ 1.33
FAM3D-204ENST00000489857 ZFYVE9O95405 1425 aa23.33■■□□□ 1.33
FAM3D-204ENST00000489857 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
FAM3D-204ENST00000489857 BCANQ96GW7 911 aa23.31■■□□□ 1.32
FAM3D-204ENST00000489857 PLEKHG1Q9ULL1 1385 aa23.29■■□□□ 1.32
FAM3D-204ENST00000489857 RIMS2Q9UQ26 1411 aa23.29■■□□□ 1.32
FAM3D-204ENST00000489857 MSH6P52701 1360 aa23.27■■□□□ 1.31
FAM3D-204ENST00000489857 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
FAM3D-204ENST00000489857 GCC2Q8IWJ2 1684 aa23.26■■□□□ 1.31
FAM3D-204ENST00000489857 UNC13BO14795 1591 aa23.26■■□□□ 1.31
FAM3D-204ENST00000489857 MYO5BQ9ULV0 1848 aa23.26■■□□□ 1.31
FAM3D-204ENST00000489857 PPP1R15AO75807 674 aaPredicted RBP23.24■■□□□ 1.31
FAM3D-204ENST00000489857 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
FAM3D-204ENST00000489857 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
FAM3D-204ENST00000489857 CHD2O14647 1828 aaKnown RBP23.22■■□□□ 1.31
FAM3D-204ENST00000489857 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
FAM3D-204ENST00000489857 TBX22Q9Y458 520 aa23.21■■□□□ 1.31
FAM3D-204ENST00000489857 E9PCH4 1651 aa23.19■■□□□ 1.3
FAM3D-204ENST00000489857 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
FAM3D-204ENST00000489857 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
FAM3D-204ENST00000489857 ROCK1Q13464 1354 aa23.18■■□□□ 1.3
FAM3D-204ENST00000489857 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
FAM3D-204ENST00000489857 NUTM2DQ5VT03 806 aaPredicted RBP23.17■■□□□ 1.3
FAM3D-204ENST00000489857 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
FAM3D-204ENST00000489857 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
FAM3D-204ENST00000489857 NCOA3Q9Y6Q9 1424 aa23.15■■□□□ 1.3
FAM3D-204ENST00000489857 JCADQ9P266 1359 aa23.14■■□□□ 1.3
FAM3D-204ENST00000489857 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
FAM3D-204ENST00000489857 COL16A1Q07092 1604 aaPredicted RBP23.12■■□□□ 1.29
FAM3D-204ENST00000489857 NUP155O75694 1391 aa23.11■■□□□ 1.29
FAM3D-204ENST00000489857 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
FAM3D-204ENST00000489857 C14orf37Q86TY3 774 aa23.1■■□□□ 1.29
FAM3D-204ENST00000489857 C19orf44Q9H6X5 657 aa23.08■■□□□ 1.29
FAM3D-204ENST00000489857 PTPRUQ92729 1446 aa23.08■■□□□ 1.28
FAM3D-204ENST00000489857 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
FAM3D-204ENST00000489857 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
FAM3D-204ENST00000489857 ITGAEP38570 1179 aa23.06■■□□□ 1.28
FAM3D-204ENST00000489857 LRP6O75581 1613 aa23.06■■□□□ 1.28
FAM3D-204ENST00000489857 TRPM2O94759 1503 aa23.06■■□□□ 1.28
FAM3D-204ENST00000489857 AMOTL2Q9Y2J4 779 aa23.05■■□□□ 1.28
FAM3D-204ENST00000489857 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
FAM3D-204ENST00000489857 ATF3P18847 181 aa23.04■■□□□ 1.28
FAM3D-204ENST00000489857 SPATA31A6Q5VVP1 1343 aa23.02■■□□□ 1.28
FAM3D-204ENST00000489857 NRXN3Q9Y4C0 1643 aa23.01■■□□□ 1.27
FAM3D-204ENST00000489857 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
FAM3D-204ENST00000489857 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
FAM3D-204ENST00000489857 BRINP3Q76B58 766 aa22.99■■□□□ 1.27
FAM3D-204ENST00000489857 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
FAM3D-204ENST00000489857 XRN1Q8IZH2 1706 aaKnown RBP22.98■■□□□ 1.27
FAM3D-204ENST00000489857 DCCP43146 1447 aa22.97■■□□□ 1.27
FAM3D-204ENST00000489857 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
FAM3D-204ENST00000489857 SPHKAPQ2M3C7 1700 aa22.96■■□□□ 1.27
FAM3D-204ENST00000489857 METP08581 1390 aa22.95■■□□□ 1.26
FAM3D-204ENST00000489857 MEX3CQ5U5Q3 659 aaKnown RBP22.95■■□□□ 1.26
FAM3D-204ENST00000489857 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
FAM3D-204ENST00000489857 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
FAM3D-204ENST00000489857 MST1RQ04912 1400 aa22.92■■□□□ 1.26
FAM3D-204ENST00000489857 ZNF772Q68DY9 489 aaPredicted RBP22.92■■□□□ 1.26
FAM3D-204ENST00000489857 NEXMIFQ5QGS0 1516 aa22.9■■□□□ 1.26
FAM3D-204ENST00000489857 CLTCL1P53675 1640 aa22.9■■□□□ 1.26
FAM3D-204ENST00000489857 NUTM2BA6NNL0 878 aaPredicted RBP22.88■■□□□ 1.25
FAM3D-204ENST00000489857 NUTM2EB1AL46 878 aaPredicted RBP22.88■■□□□ 1.25
FAM3D-204ENST00000489857 NUTM2AQ8IVF1 878 aaPredicted RBP22.88■■□□□ 1.25
FAM3D-204ENST00000489857 SETD5Q9C0A6 1442 aa22.88■■□□□ 1.25
FAM3D-204ENST00000489857 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
FAM3D-204ENST00000489857 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
FAM3D-204ENST00000489857 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
FAM3D-204ENST00000489857 NAIPQ13075 1403 aa22.84■■□□□ 1.25
FAM3D-204ENST00000489857 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
FAM3D-204ENST00000489857 UPF1Q92900 1129 aaKnown RBP eCLIP22.83■■□□□ 1.25
FAM3D-204ENST00000489857 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
FAM3D-204ENST00000489857 RXRBP28702 533 aa22.82■■□□□ 1.24
FAM3D-204ENST00000489857 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
FAM3D-204ENST00000489857 LRRC59Q96AG4 307 aaKnown RBP22.81■■□□□ 1.24
FAM3D-204ENST00000489857 AFF2P51816 1311 aa22.81■■□□□ 1.24
FAM3D-204ENST00000489857 PNPLA6Q8IY17 1366 aa22.79■■□□□ 1.24
FAM3D-204ENST00000489857 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
FAM3D-204ENST00000489857 PTCH1Q13635 1447 aa22.77■■□□□ 1.24
FAM3D-204ENST00000489857 C1orf167Q5SNV9 1468 aa22.77■■□□□ 1.24
FAM3D-204ENST00000489857 KIF1BO60333 1816 aa22.77■■□□□ 1.24
FAM3D-204ENST00000489857 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
FAM3D-204ENST00000489857 VGFO15240 615 aaPredicted RBP22.74■■□□□ 1.23
FAM3D-204ENST00000489857 C8orf37Q96NL8 207 aa22.74■■□□□ 1.23
FAM3D-204ENST00000489857 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
FAM3D-204ENST00000489857 LAMC1P11047 1609 aa22.71■■□□□ 1.23
FAM3D-204ENST00000489857 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
FAM3D-204ENST00000489857 HFM1A2PYH4 1435 aa22.71■■□□□ 1.23
FAM3D-204ENST00000489857 RPGRIP1LQ68CZ1 1315 aa22.7■■□□□ 1.22
FAM3D-204ENST00000489857 RGS12O14924 1447 aa22.7■■□□□ 1.22
FAM3D-204ENST00000489857 SOS2Q07890 1332 aaPredicted RBP22.69■■□□□ 1.22
FAM3D-204ENST00000489857 QTRT2Q9H974 415 aaKnown RBP22.69■■□□□ 1.22
FAM3D-204ENST00000489857 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
FAM3D-204ENST00000489857 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
FAM3D-204ENST00000489857 RBM6P78332 1123 aaKnown RBP22.67■■□□□ 1.22
FAM3D-204ENST00000489857 NGLY1Q96IV0 654 aa22.65■■□□□ 1.22
FAM3D-204ENST00000489857 PPLO60437 1756 aa22.65■■□□□ 1.22
FAM3D-204ENST00000489857 FOXD1Q16676 465 aa22.62■■□□□ 1.21
FAM3D-204ENST00000489857 ADGRF5Q8IZF2 1346 aa22.59■■□□□ 1.21
FAM3D-204ENST00000489857 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms