RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
SERPINA1-210ENST00000489769 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.26
SERPINA1-210ENST00000489769 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
SERPINA1-210ENST00000489769 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
SERPINA1-210ENST00000489769 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
SERPINA1-210ENST00000489769 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
SERPINA1-210ENST00000489769 PPLO60437 1756 aa16.62■□□□□ 0.25
SERPINA1-210ENST00000489769 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
SERPINA1-210ENST00000489769 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
SERPINA1-210ENST00000489769 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
SERPINA1-210ENST00000489769 BCANQ96GW7 911 aa16.61■□□□□ 0.25
SERPINA1-210ENST00000489769 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
SERPINA1-210ENST00000489769 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
SERPINA1-210ENST00000489769 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
SERPINA1-210ENST00000489769 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
SERPINA1-210ENST00000489769 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
SERPINA1-210ENST00000489769 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
SERPINA1-210ENST00000489769 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
SERPINA1-210ENST00000489769 MED14O60244 1454 aa16.57■□□□□ 0.24
SERPINA1-210ENST00000489769 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
SERPINA1-210ENST00000489769 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
SERPINA1-210ENST00000489769 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
SERPINA1-210ENST00000489769 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
SERPINA1-210ENST00000489769 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
SERPINA1-210ENST00000489769 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
SERPINA1-210ENST00000489769 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
SERPINA1-210ENST00000489769 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
SERPINA1-210ENST00000489769 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
SERPINA1-210ENST00000489769 ZNF335Q9H4Z2 1342 aaPredicted RBP16.5■□□□□ 0.23
SERPINA1-210ENST00000489769 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
SERPINA1-210ENST00000489769 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
SERPINA1-210ENST00000489769 ADAMTS13Q76LX8 1427 aa16.49■□□□□ 0.23
SERPINA1-210ENST00000489769 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
SERPINA1-210ENST00000489769 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
SERPINA1-210ENST00000489769 TBX22Q9Y458 520 aa16.46■□□□□ 0.23
SERPINA1-210ENST00000489769 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
SERPINA1-210ENST00000489769 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
SERPINA1-210ENST00000489769 MYOM2P54296 1465 aa16.45■□□□□ 0.22
SERPINA1-210ENST00000489769 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
SERPINA1-210ENST00000489769 METP08581 1390 aa16.44■□□□□ 0.22
SERPINA1-210ENST00000489769 PIK3C2GO75747 1445 aa16.43■□□□□ 0.22
SERPINA1-210ENST00000489769 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
SERPINA1-210ENST00000489769 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
SERPINA1-210ENST00000489769 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
SERPINA1-210ENST00000489769 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
SERPINA1-210ENST00000489769 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
SERPINA1-210ENST00000489769 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
SERPINA1-210ENST00000489769 KCNA6P17658 529 aa16.4■□□□□ 0.22
SERPINA1-210ENST00000489769 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
SERPINA1-210ENST00000489769 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
SERPINA1-210ENST00000489769 STAC3Q96MF2 364 aa16.39■□□□□ 0.21
SERPINA1-210ENST00000489769 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
SERPINA1-210ENST00000489769 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
SERPINA1-210ENST00000489769 PRAG1Q86YV5 1406 aa16.38■□□□□ 0.21
SERPINA1-210ENST00000489769 STK26Q9P289 416 aa16.38■□□□□ 0.21
SERPINA1-210ENST00000489769 LAMC1P11047 1609 aa16.37■□□□□ 0.21
SERPINA1-210ENST00000489769 XIRP1Q702N8 1843 aaKnown RBP16.37■□□□□ 0.21
SERPINA1-210ENST00000489769 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
SERPINA1-210ENST00000489769 NBPF8Q3BBV2 869 aa16.36■□□□□ 0.21
SERPINA1-210ENST00000489769 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
SERPINA1-210ENST00000489769 PIK3R4Q99570 1358 aa16.36■□□□□ 0.21
SERPINA1-210ENST00000489769 XRN1Q8IZH2 1706 aaKnown RBP16.35■□□□□ 0.21
SERPINA1-210ENST00000489769 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
SERPINA1-210ENST00000489769 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
SERPINA1-210ENST00000489769 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
SERPINA1-210ENST00000489769 CPS1P31327 1500 aa16.34■□□□□ 0.21
SERPINA1-210ENST00000489769 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
SERPINA1-210ENST00000489769 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
SERPINA1-210ENST00000489769 LRRC7Q96NW7 1537 aa16.33■□□□□ 0.2
SERPINA1-210ENST00000489769 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
SERPINA1-210ENST00000489769 ADGRB1O14514 1584 aa16.32■□□□□ 0.2
SERPINA1-210ENST00000489769 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
SERPINA1-210ENST00000489769 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 LRPPRCP42704 1394 aaKnown RBP16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 TIMELESSQ9UNS1 1208 aa16.3■□□□□ 0.2
SERPINA1-210ENST00000489769 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
SERPINA1-210ENST00000489769 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
SERPINA1-210ENST00000489769 C14orf37Q86TY3 774 aa16.28■□□□□ 0.2
SERPINA1-210ENST00000489769 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
SERPINA1-210ENST00000489769 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.19
SERPINA1-210ENST00000489769 ABCC11Q96J66 1382 aa16.27■□□□□ 0.19
SERPINA1-210ENST00000489769 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
SERPINA1-210ENST00000489769 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
SERPINA1-210ENST00000489769 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
SERPINA1-210ENST00000489769 TECPR2O15040 1411 aa16.24■□□□□ 0.19
SERPINA1-210ENST00000489769 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
SERPINA1-210ENST00000489769 NALCNQ8IZF0 1738 aa16.24■□□□□ 0.19
SERPINA1-210ENST00000489769 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.24■□□□□ 0.19
SERPINA1-210ENST00000489769 POGKQ9P215 609 aa16.23■□□□□ 0.19
SERPINA1-210ENST00000489769 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
SERPINA1-210ENST00000489769 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
SERPINA1-210ENST00000489769 UBAP1LF5GYI3 381 aa16.21■□□□□ 0.18
SERPINA1-210ENST00000489769 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
SERPINA1-210ENST00000489769 MSH6P52701 1360 aa16.2■□□□□ 0.18
SERPINA1-210ENST00000489769 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
SERPINA1-210ENST00000489769 FAM135BQ49AJ0 1406 aa16.2■□□□□ 0.18
SERPINA1-210ENST00000489769 IQSEC2Q5JU85 1478 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms